PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for
Pseudotsuga menziesii
LBD FamilyPhylogenetic tree for domain ? help Back to Top |
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/------------------------------------------------------------------ PSME_00005146-RA/7-108 (1) | |------------------------------------------------------------------ PSME_00005151-RA/15-106 (83) | |------------------------------------------------------------------ PSME_00010378-RA/2-56 (93) | |------------------------------------------------------------------ PSME_00054958-RA/7-108 (127) | | /------------------------------------------------- PSME_00048314-RA/91-189 (2) | | | | /----- PSME_00048626-RA/44-143 (3) | | /-100-+ | | | \----- PSME_00022409-RA/10-109 (9) | | /----59----+ | | | | /----- PSME_00027983-RA/12-110 (4) | | | \--82-+ | | | \----- PSME_00046045-RA/14-113 (22) | | | | | /-93-+ /----- PSME_00049184-RA/4-102 (32) | | | | /-100-+ | | | | | \----- PSME_00049184-RA/156-254 (142) | | | | /-53-+ | | | | | \----------- PSME_00046046-RA/11-110 (41) | | | \--96-+ | | | \---------------- PSME_00042673-RA/11-110 (77) | |----------80---------+ | | | /----- PSME_00053746-RA/9-106 (14) | | | /--99-+ | | | | \----- PSME_00013880-RA/19-118 (44) | | | | | | | |----------- PSME_00013883-RA/12-109 (50) | | \------100------+ | | |----------- PSME_00048927-RA/17-114 (131) | | | | | \----------- PSME_00014950-RA/11-110 (136) | | | | /----- PSME_00054855-RA/2-98 (6) | | /-100-+ | | | \----- PSME_00037372-RA/81-177 (121) | | /-52-+ | | | | /----- PSME_00037373-RA/13-111 (10) | | | \--88-+ | | /--63-+ \----- PSME_00055072-RA/4-100 (19) | | | | | | | \---------------- PSME_00054858-RA/2-98 (138) | | | | | /-51-+ /----------- PSME_00042272-RA/2-99 (21) | | | | | | | | | /-95-+ /----- PSME_00038160-RA/2-61 (130) | | | | | \--95-+ | | | \--61-+ \----- PSME_00054567-RA/4-101 (133) | | | | | | /--55-+ \---------------- PSME_00010017-RA/2-99 (150) | | | | | | | | /----- PSME_00021971-RA/15-112 (35) | | | | /-100-+ | | | | | \----- PSME_00031117-RA/4-101 (88) | | | \-------77------+ | | | \----------- PSME_00021974-RA/4-96 (57) | | | | | | /----- PSME_00036021-RA/20-58 (31) | | | /----98----+ | |------100------+ | \----- PSME_00026677-RA/17-115 (112) | | | | | | |-------86-------+ /----- PSME_00041119-RA/31-132 (74) | | | | /--86-+ | | | | | \----- PSME_00006100-RA/10-111 (110) | | | \-80-+ | | | \----------- PSME_00043038-RA/35-136 (81) | | | | | |--------------------------------- PSME_00048520-RA/2-100 (95) | | | | | \--------------------------------- PSME_00054965-RA/4-103 (135) | | | | /---------------- PSME_00008717-RA/8-106 (8) | | | | | /-100-+ /----------- PSME_00008715-RA/8-106 (70) | | | | | | | | \-66-+ /----- PSME_00008713-RA/8-106 (92) | | | \--78-+ | | | \----- PSME_00008714-RA/5-78 (115) | | /-76-+ | | | | /----- PSME_00008713-RA/243-337 (16) | | | | /--76-+ | | | | | \----- PSME_00008717-RA/243-337 (65) | | | \----100---+ | |----------54---------+ | /----- PSME_00008716-RA/1-56 (62) | | | \--75-+ | | | \----- PSME_00008714-RA/221-296 (120) | | | | | | /----- PSME_00037120-RA/10-110 (87) | | \---------100---------+ | | \----- PSME_00051173-RA/39-139 (99) | | | | /--------------------------------- PSME_00020284-RA/93-188 (13) | | | | | | /----- PSME_00054149-RA/24-96 (25) | | | | | | | /-------100------+----- PSME_00031067-RA/85-176 (51) | | | | | | | | | \----- PSME_00031067-RA/217-308 (66) | | | | | | | | /----------- PSME_00052802-RA/70-164 (27) | | | /-88-+ | | | | | | |----------- PSME_00003925-RA/20-113 (46) | | | | | /-100+ | | | | | | | /----- PSME_00003928-RA/46-140 (55) | | | | | | \-100-+ | | /-100+ | \--99-+ \----- PSME_00003927-RA/20-114 (68) | | | | | | | | | |--72-+ \---------------- PSME_00017029-RA/20-114 (42) | | | | | | | | | | /----- PSME_00020285-RA/24-118 (26) | | | | | /----93----+ | | | | | | \----- PSME_00007487-RA/35-82 (111) | | | | | | | | /--86-+ | \----82----+ /----- PSME_00055549-RA/17-111 (30) + | | | | | /--82-+ | /-100-+ | | | | | \----- PSME_00020282-RA/154-248 (37) | | | | | | \-96-+ | | | | | | \----------- PSME_00028194-RA/17-111 (85) | | | | | | | | | | | \--------------------------------- PSME_00031112-RA/33-128 (134) | | | | | | | |-55-+ \-------------------------------------- PSME_00026510-RA/4-56 (90) | | | | | | | | /----------- PSME_00028054-RA/22-122 (38) | | | | | | | | | /-100+ /----- PSME_00054400-RA/13-113 (94) | | | | | \--88-+ | | | | /-100-+ \----- PSME_00033079-RA/43-97 (160) | | | | | | | | | \----------61---------+ \---------------- PSME_00048913-RA/22-122 (96) | | | | | | | \---------------------- PSME_00009389-RA/25-124 (130) | | | | | | /---------------------- PSME_00049982-RA/3-41 (18) | | | | | | |------------78------------+ /---------------- PSME_00038959-RA/295-392 (120) | | | | | | | | \--89-+ /----------- PSME_00038959-RA/91-189 (123) | | | | | | | | \-51-+ /----- PSME_00053390-RA/75-128 (124) | | | \--56-+ | | | \----- PSME_00043015-RA/27-125 (126) | | | | | | /----- PSME_00028196-RA/40-92 (20) | | | /--91-+ | | | | \----- PSME_00041736-RA/34-132 (76) | | | /-97-+ | | | | \----------- PSME_00028195-RA/32-131 (60) | | |---------------94---------------+ | | | \---------------- PSME_00055376-RA/34-133 (43) | | | | | |------------------------------------------------- PSME_00043556-RA/33-91 (23) | | | | | |------------------------------------------------- PSME_00043556-RA/8-38 (28) | | | | | |------------------------------------------------- PSME_00050914-RA/19-118 (29) | | | | | |------------------------------------------------- PSME_00049981-RA/15-61 (33) | | | | | | /----- PSME_00049859-RA/21-120 (34) | | |---------------------60--------------------+ | | | \----- PSME_00044524-RA/14-113 (82) | | | | | | /----- PSME_00045603-RA/12-111 (36) | | | /--93-+ | | | | \----- PSME_00034173-RA/53-98 (73) | | | | | | | /-100+----------- PSME_00045602-RA/41-140 (64) | | | | | | | | | | /----- PSME_00022332-RA/18-117 (72) | | | | \--58-+ | | | | \----- PSME_00011298-RA/18-117 (170) | | | /--51-+ | | | | | /----- PSME_00050292-RA/13-59 (78) | | | | |----84----+ | | | | | \----- PSME_00056199-RA/41-86 (132) | | |------------100-----------+ | | | | | \---------------- PSME_00050292-RA/81-137 (117) | | | | | | | \---------------------- PSME_00038304-RA/38-137 (141) | /-66-+ | | | | |------------------------------------------------- PSME_00043149-RA/33-127 (40) | | | | | | | |------------------------------------------------- PSME_00043148-RA/23-123 (48) | | | | | | | |------------------------------------------------- PSME_00012900-RA/1-40 (49) | | | | | | | | /----------- PSME_00003700-RA/49-149 (53) | | | | | | | | | /-100+ /----- PSME_00004522-RA/19-119 (69) | | | | | \--61-+ | | | |---------------83---------------+ \----- PSME_00004523-RA/19-119 (110) | | | | | | | | | \---------------- PSME_00004523-RA/157-256 (61) | | | | | | | |------------------------------------------------- PSME_00017033-RA/1-55 (54) | | | | | | | |------------------------------------------------- PSME_00043556-RA/91-145 (56) | | | | | | | | /----------- PSME_00039447-RA/7-106 (67) | | | | | | | | | /-53-+ /----- PSME_00056307-RA/44-91 (100) | | | | | \--61-+ | | | |---------------59---------------+ \----- PSME_00039448-RA/44-97 (128) | | | | | | | | | \---------------- PSME_00038331-RA/7-104 (137) | | | | | | | |------------------------------------------------- PSME_00036811-RA/8-107 (71) | | | | | | | |------------------------------------------------- PSME_00033394-RA/18-115 (75) | | | | | | | |------------------------------------------------- PSME_00007117-RA/8-107 (79) | | | | | | | |------------------------------------------------- PSME_00012897-RA/1-40 (84) | | | | | | | |------------------------------------------------- PSME_00026511-RA/76-122 (86) | | | | | | | |------------------------------------------------- PSME_00056008-RA/11-110 (97) | | | | | | | |------------------------------------------------- PSME_00045971-RA/25-62 (98) | | | | | | | |------------------------------------------------- PSME_00055494-RA/16-115 (180) | | | | | | | |------------------------------------------------- PSME_00020323-RA/17-116 (114) | | | | | | | \------------------------------------------------- PSME_00012898-RA/30-77 (116) | | | | | | /----- PSME_00048168-RA/5-63 (11) | | | | | | | |----- PSME_00054703-RA/7-104 (12) \--51-+ | /--98-+ | | | |----- PSME_00054308-RA/7-104 (39) | | | | | | /-63-+ \----- PSME_00048167-RA/7-104 (63) | | | | | | | \----------- PSME_00054448-RA/7-104 (140) | | /--76-+ | | | | /----- PSME_00054800-RA/7-104 (58) | | | \----63----+ | | | \----- PSME_00055706-RA/7-102 (113) | | | | | | /----- PSME_00007562-RA/5-105 (15) | | | /-100-+ | | | | \----- PSME_00007561-RA/5-105 (129) | | |----100---+ | \---------------92---------------+ \----------- PSME_00052716-RA/40-138 (119) | | | | /----- PSME_00049570-RA/7-96 (80) | | /-100-+ | | | \----- PSME_00049571-RA/7-104 (91) | |----97----+ | | \----------- PSME_00035172-RA/12-109 (122) | | | \---------------------- PSME_00055074-RA/7-107 (139) | |------------------------------------------------------------ PSME_00013329-RA/6-51 (5) | | /----- PSME_00002019-RA/6-82 (7) |--------------------------97--------------------------+ | \----- PSME_00015906-RA/6-82 (140) | | /----- PSME_00047014-RA/6-93 (17) |--------------------------55--------------------------+ | \----- PSME_00014153-RA/2-68 (24) | | /----- PSME_00050198-RA/25-99 (45) |--------------------------53--------------------------+ | \----- PSME_00050347-RA/6-93 (125) | |------------------------------------------------------------ PSME_00055400-RA/6-92 (47) | |------------------------------------------------------------ PSME_00042628-RA/6-93 (52) | |------------------------------------------------------------ PSME_00048849-RA/5-80 (59) | | /----- PSME_00053685-RA/6-59 (89) |--------------------------55--------------------------+ | \----- PSME_00019230-RA/6-93 (118) | \------------------------------------------------------------ PSME_00053379-RA/89-190 (190) |
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 206: /--------------- PSME_00017029-RA (3) | | /----- PSME_00003928-RA (6) /---100---+ /-100+ | | | \----- PSME_00003927-RA (59) | | | | \-100+---------- PSME_00003925-RA (39) | | | \---------- PSME_00052802-RA (120) | /-84-+ /----- PSME_00007487-RA (28) | | | | | /------70------+----- PSME_00031112-RA (77) | | | | | | | \----- PSME_00020284-RA (85) | | | | \-89-+ /--------------- PSME_00020285-RA (57) | | | /--97-+ | | /----- PSME_00020282-RA (72) | | \-72-+ /-100+ | | | | \----- PSME_00055549-RA (83) | | \-76-+ | | \---------- PSME_00028194-RA (79) /-----------72-----------+ | | | | /----- PSME_00054149-RA (112) | | \-----------100----------+ | | \----- PSME_00031067-RA (126) | | | \------------------------------------ PSME_00026510-RA (98) | | /-------------------- PSME_00053379-RA (4) | | | | /----- PSME_00042628-RA (9) | | /-76-+ | | | \----- PSME_00014153-RA (40) | | | | | |---------- PSME_00013329-RA (34) | | | | | |---------- PSME_00048849-RA (48) | | | | /-100+ |---------- PSME_00050347-RA (53) | | | | | | | |---------- PSME_00019230-RA (69) | | | /-91-+ | | | | |---------- PSME_00055400-RA (117) | | | | | | | | | |---------- PSME_00002019-RA (118) | | | | | | | | | |---------- PSME_00047014-RA (119) | /-75-+ \-99-+ | | | | | |---------- PSME_00015906-RA (131) | | | | | | | | | \---------- PSME_00053685-RA (132) | | | | | | | \--------------- PSME_00050198-RA (58) | | | | /--88-+ | /----- PSME_00005146-RA (27) | | | \---------67--------+ | | | \----- PSME_00054958-RA (56) | | | | | |------------------------------ PSME_00010378-RA (50) | | | | | \------------------------------ PSME_00005151-RA (114) | | | /-86-+ /------------------------- PSME_00055074-RA (14) | | | | | | | | /----- PSME_00049571-RA (16) | | | | /-100+ | | | | | \----- PSME_00049570-RA (92) | | | | /-100+ | | | | | \---------- PSME_00035172-RA (52) | | | | | | | \----92----+ | /----- PSME_00054703-RA (24) | | | | /-59-+ | | | | | \----- PSME_00054308-RA (32) | | | /-55-+ | | | | | |-99-+---------- PSME_00048168-RA (38) | /-74-+ | | | | | | | | | | \---------- PSME_00048167-RA (96) | | | | | | | | | \-83-+ | /----- PSME_00055706-RA (51) | | | | \----92---+ | | | | \----- PSME_00054448-RA (66) | | | | | | | \-------------------- PSME_00054800-RA (21) | | | | | | /----- PSME_00007562-RA (17) | | | /-100+ | | | | \----- PSME_00007561-RA (54) | | \--------------95--------------+ | | \---------- PSME_00052716-RA (160) | | | | /----- PSME_00038160-RA (7) | | /-100+ | | | \----- PSME_00054567-RA (116) | | /------100-----+ | | | \---------- PSME_00042272-RA (30) | | | | | | /---------- PSME_00043038-RA (12) | | | | | | | /-88-+ /----- PSME_00041119-RA (90) | | /----80----+ | \-100+ --75-+ | | | | \----- PSME_00006100-RA (111) | | | | /-89-+ | | | | | | /----- PSME_00036021-RA (124) | | | | | \---100---+ | | | \-79-+ \----- PSME_00026677-RA (129) | | | | | | | | /----- PSME_00021971-RA (18) | | | \------100-----+ | | | \----- PSME_00031117-RA (75) | | | | | /-73-+ /----- PSME_00054855-RA (13) | | | | /-100+ | | | | | \----- PSME_00037372-RA (93) | | | | /-100+ | | | | | \---------- PSME_00037373-RA (68) | | | | /-87-+ | | | | | \--------------- PSME_00054858-RA (46) | | | | /-87-+ | |-99-+ | | \-------------------- PSME_00055072-RA (130) | | | | /-73-+ | | | | | \------------------------- PSME_00010017-RA (42) | /-55-+ | \--71-+ | | | | | /----- PSME_00021974-RA (31) | | | | \-----------99-----------+ | | | | \----- PSME_00048520-RA (100) | | | | | | | \----------------------------------------- PSME_00054965-RA (190) | | | | | | /-------------------- PSME_00008716-RA (11) | | | | | | | | /----- PSME_00008713-RA (71) | | | | /-100+ | | |------------93-----------+ | \----- PSME_00008717-RA (127) | | | | /-58-+ | | | | | \---------- PSME_00008715-RA (89) | | | \-100+ | | | \--------------- PSME_00008714-RA (74) | | | | | | /---------- PSME_00022332-RA (19) | | | | | | | |---------- PSME_00034173-RA (73) | | | | | | | /-97-+ /----- PSME_00045603-RA (84) | | | | |-82-+ | | | | | \----- PSME_00045602-RA (121) | /-51-+ | /-50-+ | | | | | | | \---------- PSME_00011298-RA (88) | | | | | | | | | |------------93-----------+ \--------------- PSME_00038304-RA (125) | | | | | | | | | | /----- PSME_00050292-RA (91) | | | | \------89------+ | | | | \----- PSME_00056199-RA (122) | | | | | | | |---------------------------------------------- PSME_00036811-RA (45) | | | | | | | | /----- PSME_00051173-RA (62) | | | |-------------------100------------------+ |-55-+ | | \----- PSME_00037120-RA (76) | | | | | | | |---------------------------------------------- PSME_00056008-RA (65) | | | | | | | |---------------------------------------------- PSME_00026511-RA (70) | | | | | | | |---------------------------------------------- PSME_00033394-RA (97) | | | | | | | \---------------------------------------------- PSME_00007117-RA (170) | | | | | \--------------------------------------------------- PSME_00044524-RA (25) | | | \-------------------------------------------------------- PSME_00049859-RA (26) | | /----- PSME_00054400-RA (15) | /-100+ | | \----- PSME_00033079-RA (36) | /-95-+ | | \---------- PSME_00028054-RA (99) | /-100+ | | \--------------- PSME_00048913-RA (29) \-------------------78-------------------+ \-------------------- PSME_00009389-RA (33) Root part of tree: /------------------------------------------------------------------ PSME_00046046-RA (1) | |------------------------------------------------------------------ PSME_00027983-RA (49) | | /----------- PSME_00049981-RA (2) | /---------------76---------------+ | | \----------- PSME_00049982-RA (81) | | | | /----------- PSME_00038959-RA (10) | | /----75----+ | | | \----------- PSME_00043015-RA (87) | |---------100---------+ | /----61----+ \---------------------- PSME_00053390-RA (123) | | | | | | /----------- PSME_00048927-RA (35) | | | /----97----+ | | | | \----------- PSME_00013883-RA (47) | | | /----65----+ | | | | \---------------------- PSME_00053746-RA (94) | | \----100---+ | | | /----------- PSME_00013880-RA (150) | | \----------64---------+ | | \----------- PSME_00014950-RA (180) | | | |------------------------------------------------------- (206) | | | | /--------------------------------- PSME_00045971-RA (5) | | | | | /----86----+ /---------------------- PSME_00003700-RA (37) | | | | | | | | \----100---+ /----------- PSME_00004522-RA (43) | |----62----+ \----60----+ | | | \----------- PSME_00004523-RA (82) | | | | | \-------------------------------------------- PSME_00055494-RA (128) | | | | /---------------------- PSME_00039447-RA (8) | | | + | /----83----+ /----------- PSME_00056307-RA (23) | | | \----85----+ | | /----91----+ \----------- PSME_00039448-RA (41) |----100---+ | | | | | \--------------------------------- PSME_00038331-RA (22) | | | | | | /---------------------- PSME_00041736-RA (44) | | | | | | | /----96----+ /----------- PSME_00028196-RA (61) | | | | \----87----+ | | |----100---+ \----------- PSME_00028195-RA (140) | | | | | |----80----+ \--------------------------------- PSME_00055376-RA (55) | | | | | |-------------------------------------------- PSME_00043556-RA (63) | | | | | | /----------- PSME_00043149-RA (86) | | |---------------95---------------+ | | | \----------- PSME_00043148-RA (115) | | | | | |-------------------------------------------- PSME_00020323-RA (113) | | | | | \-------------------------------------------- PSME_00050914-RA (130) | | | |------------------------------------------------------- PSME_00048314-RA (64) | | | |------------------------------------------------------- PSME_00012897-RA (67) | | | |------------------------------------------------------- PSME_00012898-RA (78) | | | |------------------------------------------------------- PSME_00012900-RA (110) | | | \------------------------------------------------------- PSME_00017033-RA (110) | | /-------------------------------------------- PSME_00046045-RA (20) | | | | /----------- PSME_00022409-RA (60) | | /----100---+ \----------59---------+ | \----------- PSME_00048626-RA (95) | /----100---+ | | \---------------------- PSME_00049184-RA (120) \----100---+ \--------------------------------- PSME_00042673-RA (80) |