PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP842
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Subtree rooted at node 245: /----- Brast07G091200.1.p [Brachypodium stacei] (2) /-100+ | \----- Bradi1g44328.1.p [Brachypodium distachyon] (34) /-100+ | | /----- Brast07G093800.1.p [Brachypodium stacei] (3) | \-100+ /-100+ \----- Brast07G091600.1.p [Brachypodium stacei] (21) | | | | /----- Brast02G069000.1.p [Brachypodium stacei] (33) | \---100---+ | \----- Bradi1g72300.2.p [Brachypodium distachyon] (119) /-91-+ | | /----- EMT12195 [Aegilops tauschii] (57) | | /---100---+ | | | \----- MLOC_16598.1 [Hordeum vulgare] (170) | | | | \-100+ /----- EMT08681 [Aegilops tauschii] (72) | | /-100+ | | | \----- MLOC_54039.1 [Hordeum vulgare] (140) /---------72---------+ \-100+ | | | /----- Traes_7BS_62FDC3C38.1 [Triticum aestivum] (94) | | \-100+ | | \----- EMT25469 [Aegilops tauschii] (130) | | | | /----- TRIUR3_35104-P1 [Triticum urartu] (8) | | /-100+ | | | \----- EMT01629 [Aegilops tauschii] (116) | \------84------+ | \---------- EMT13043 [Aegilops tauschii] (89) | | /------------------------------ EMT18945 [Aegilops tauschii] (5) | | | | /----- EMT25286 [Aegilops tauschii] (6) | | /----95---+ | | | \----- EMT19036 [Aegilops tauschii] (74) /-91-+ | | | | | /-98-+ /----- EMT05659 [Aegilops tauschii] (15) | | /--98-+ | | /-61-+ | | | | | | | \----- EMT25287 [Aegilops tauschii] (43) | | | | | \-92-+ | | | | /-98-+ \---------- TRIUR3_33433-P1 [Triticum urartu] (45) | | | | | | | | | | | | /----- TRIUR3_31433-P1 [Triticum urartu] (79) | | | | | \------63------+ | | | \-91-+ \----- Traes_7AS_6A126F5F5.1 [Triticum aestivum] (111) | | /-100+ | | | | | | /----- MLOC_10707.1 [Hordeum vulgare] (69) | | | | \--------100--------+ | | | | \----- MLOC_51337.2 [Hordeum vulgare] (110) | | | | | | | | /----- EMT20212 [Aegilops tauschii] (42) | \-88-+ | /-100+ | | | | \----- Traes_1AL_FF8F7A939.1 [Triticum aestivum] (133) | | \-----------100-----------+ | | \---------- MLOC_10538.2 [Hordeum vulgare] (129) | | | \----------------------------------------- Bradi1g48002.1.p [Brachypodium distachyon] (83) | | /---------- ORUFI06G04920.1 [Oryza rufipogon] (7) /-71-+ | | | /-91-+ /----- BGIOSGA021814-PA [Oryza sativa indica] (16) | | | \-100+ | | | \----- BGIOSGA021811-PA [Oryza sativa indica] (128) | | /-97-+ | | | | /----- LOC_Os06g07650.1 [Oryza sativa japonica] (90) | | | \----89---+ | | | \----- BGIOSGA021812-PA [Oryza sativa indica] (91) | | | | | /-98-+ /----- OGLUM06G05040.1 [Oryza glumaepatula] (12) | | | |------100-----+ | | | | \----- ORGLA06G0044500.1 [Oryza glaberrima] (51) | | /-100+ | | | | | \-------------------- ONIVA06G15060.1 [Oryza nivara] (85) | | | | | | /--99-+ \------------------------- ONIVA06G15070.1 [Oryza nivara] (71) | | | | | | | \------------------------------ OPUNC06G04640.1 [Oryza punctata] (29) | | | | | | /----- LPERR06G12030.1 [Leersia perrieri] (50) | | | /-100+ | | | | \----- LPERR06G12060.1 [Leersia perrieri] (60) | | | /-100+ | | | | \---------- LPERR06G04400.1 [Leersia perrieri] (190) | \------75------+ | | |---------100--------+ /---------- LPERR06G04370.1 [Leersia perrieri] (80) | | | | | | \-100+ /----- LPERR06G04390.1 [Leersia perrieri] (82) | | \-100+ | | \----- LPERR10G06560.1 [Leersia perrieri] (160) | | | |------------------------------------ OB06G14490.1 [Oryza brachyantha] (58) | | | \------------------------------------ OB06G14500.1 [Oryza brachyantha] (110) | | /----- Pavir.4KG086300.1.p [Panicum virgatum] (4) | /-95-+ | | \----- Pavir.4KG068400.1.p [Panicum virgatum] (150) | /-100+ | | \---------- Pahal.F02290.1 [Panicum hallii] (23) | | | | /----- Sevir.4G084800.1.p [Setaria viridis] (49) | | /-100+ | | | \----- Seita.4G085600.1.p [Setaria italica] (93) | /-57-+-51-+ | | | \---------- Do024772.1 [Dichanthelium oligosanthes] (100) | | | | | |--------------- Do004212.1 [Dichanthelium oligosanthes] (54) | | | | | | /----- Sevir.4G054100.1.p [Setaria viridis] (114) | | \---100---+ | /-98-+ \----- Seita.4G056600.1.p [Setaria italica] (117) | | | | | | /----- Pavir.7NG315200.1.p [Panicum virgatum] (31) | | | /-100+ | | | | \----- Pavir.7NG313700.1.p [Panicum virgatum] (36) | | | /-100+ |--------------82--------------+ | | \---------- Pavir.7KG323100.1.p [Panicum virgatum] (65) | | \-59-+ | | | /----- Sevir.4G223800.1.p [Setaria viridis] (73) | | \---100---+ | | \----- Seita.4G214200.1.p [Setaria italica] (132) | | | \------------------------- Do004213.1 [Dichanthelium oligosanthes] (99) | | /----- Sevir.6G154400.1.p [Setaria viridis] (9) | /------100-----+ | | \----- Seita.6G148300.1.p [Setaria italica] (124) | | | | /----- Sevir.2G109600.1.p [Setaria viridis] (10) | | /-100+ | /-54-+ | \----- Seita.2G103800.1.p [Setaria italica] (61) | | | /-100+ | | | | | /----- Sevir.2G109900.1.p [Setaria viridis] (118) | | | | \-100+ | | \-100+ \----- Seita.2G104000.1.p [Setaria italica] (131) | /-56-+ | | | | | /----- Sevir.3G059000.1.p [Setaria viridis] (81) | | | \---100---+ | | | \----- Seita.3G058100.1.p [Setaria italica] (121) | | | | | \------------------------- Seita.3G058200.1.p [Setaria italica] (32) | | | | /---------- Pavir.3KG142100.1.p [Panicum virgatum] (28) | | | |------------75-----------+ /-100+ /----- Pavir.9NG620200.1.p [Panicum virgatum] (46) | | | \-64-+ | | | \----- Pahal.C01321.1 [Panicum hallii] (98) | | | | | /-99-+ /----- Pavir.9NG620100.1.p [Panicum virgatum] (48) | | | | /-58-+ | | | | | \----- Pavir.3KG142000.1.p [Panicum virgatum] (67) /-93-+ | | \-100+ | | | | \---------- Pahal.C01320.1 [Panicum hallii] (122) | | \---100---+ | | | /----- Pavir.3KG142300.1.p [Panicum virgatum] (37) | | | /-100+ | | | | \----- Pavir.9NG620400.1.p [Panicum virgatum] (64) | | \---100---+ | | \---------- Pahal.C01323.1 [Panicum hallii] (112) | | | | /----- Sobic.009G039100.1.p [Sorghum bicolor] (13) | | /-100+ | | | \----- Sobic.009G039000.1.p [Sorghum bicolor] (180) | | /------100-----+ | | | \---------- GRMZM2G121111_P01 [Zea mays] (17) | | | | | | /----- Sobic.009G039200.1.p [Sorghum bicolor] (20) | | | /-92-+ | | | | \----- Sobic.009G039700.1.p [Sorghum bicolor] (25) | | | /-59-+ | | | | \---------- GRMZM2G422083_P01 [Zea mays] (26) | | | /-100+ | | | | | /----- Sobic.009G039600.1.p [Sorghum bicolor] (53) | | | | \----63---+ | | | | \----- Sobic.009G039500.1.p [Sorghum bicolor] (125) | |--------------80--------------+ | | | |-100+ /----- GRMZM2G030403_P01 [Zea mays] (24) | | | | /---100---+ | | | | | \----- Sobic.009G039900.1.p [Sorghum bicolor] (44) | | | | | | | | \-100+ /---------- GRMZM2G111306_P01 [Zea mays] (52) | | | | | | | | \-100+ /----- Sobic.009G040100.1.p [Sorghum bicolor] (55) | | | \-100+ | | | \----- Sobic.009G040000.2.p [Sorghum bicolor] (120) | | | | | \------------------------- AC199820.4_FGP006 [Zea mays] (115) | | | | /--------------- Zmw_sc00494.1.g00490.1 [Zoysia matrella] (14) | | | | | | /----- Zmw_sc04003.1.g00080.1 [Zoysia matrella] (63) | | /---------100--------+ /-95-+ | | | | | \----- Zpz_sc01916.1.g00040.1.am.mk [Zoysia pacifica] (127) | | | \-84-+ | | | \---------- Zjn_sc00004.1.g02460.1.am.mk [Zoysia japonica] (96) | | | | | | /----- Zmw_sc00446.1.g00040.1 [Zoysia matrella] (18) | | | /-100+ | | | | \----- Zjn_sc00049.1.g01700.1.sm.mk [Zoysia japonica] (47) | | | /-76-+ | | /-100+ | \---------- Zpz_sc01329.1.g00050.1.sm.mk [Zoysia pacifica] (40) --100+ | | | /-100+ | | | | | \--------------- Zpz_sc00209.1.g00360.1.am.mk [Zoysia pacifica] (86) | | | | /-80-+ | | | | | \-------------------- Zpz_sc00209.1.g00340.1.am.mk [Zoysia pacifica] (22) | | | | /-61-+ | | | | | | /----- Zmw_sc00446.1.g00060.1 [Zoysia matrella] (78) | | | | | \--------100--------+ | |------97------+ \-100-+ \----- Zjn_sc00049.1.g01680.1.am.mk [Zoysia japonica] (126) | | | | | | | | /----- Zmw_sc01405.1.g00060.1 [Zoysia matrella] (62) | | | \-----------100----------+ | | | \----- Zpz_sc01329.1.g00030.1.sm.mk [Zoysia pacifica] (76) | | | | | | /----- Oropetium_20150105_17238A [Oropetium thomaeum] (95) | | \-----------------87----------------+ | | \----- Oropetium_20150105_05887A [Oropetium thomaeum] (130) | | | | /----- Sevir.2G180100.1.p [Setaria viridis] (27) | | /-100+ | | | \----- Seita.2G174300.1.p [Setaria italica] (68) | |----------------------67---------------------+ | | \---------- Sevir.2G180400.1.p [Setaria viridis] (56) | | | | /----- Spipo5G0045600 [Spirodela polyrhiza] (30) | | /-100+ | | | \----- Spipo5G0047000 [Spirodela polyrhiza] (120) | | /-97-+ | | | \---------- Spipo0G0004900 [Spirodela polyrhiza] (75) | | | | | | /----- Zosma104g00390.1 [Zostera marina] (38) | | |----93---+ | | | \----- GSMUA_AchrUn_randomP04880_001 [Musa acuminata] (123) | |-------------------97-------------------+ | | | /----- Traes_3AL_891566958.1 [Triticum aestivum] (59) | | |----98---+ | | | \----- Traes_3AS_794DAF12D.1 [Triticum aestivum] (92) | | | | | \--------------- XP_010940655.1 [Elaeis guineensis] (113) | | | | /----- Sobic.010G058000.1.p [Sorghum bicolor] (39) | | /-100+ | | | \----- GRMZM2G402156_P01 [Zea mays] (87) | \----------------------89---------------------+ | \---------- Sobic.010G075100.1.p [Sorghum bicolor] (41) | | /----- Pavir.4NG115200.1.p [Panicum virgatum] (11) | /-100+ | | \----- Pavir.4KG186700.1.p [Panicum virgatum] (35) | /-100+ | | \---------- Pahal.D02777.1 [Panicum hallii] (97) \----------------------95---------------------+ | /----- Sevir.4G198500.1.p [Setaria viridis] (19) \---100---+ \----- Seita.4G118600.1.p [Setaria italica] (70) Root part of tree: /------------------------------------------------------------------ Sobic.010G111400.1.p [Sorghum bicolor] (1) | |------------------------------------------------------------------ Sobic.010G109700.1.p [Sorghum bicolor] (84) | | /---------------- (245) + /-------52-------+ | | \---------------- Sobic.010G085700.2.p [Sorghum bicolor] (88) | /-------95------+ | | \--------------------------------- Sobic.001G301100.1.p [Sorghum bicolor] (66) \-------78-------+ \------------------------------------------------- Sobic.010G111500.1.p [Sorghum bicolor] (77) |