PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00446.1.g00040.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 191aa    MW: 21374.8 Da    PI: 9.8525
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00446.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.32e-094889447
                                  S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                  W+t E+ +++++ + +G  +Wk Ia ++ k+Rt+  + s+ qky
  Zmw_sc00446.1.g00040.1.sm.mk 48 WSTGEHRQFLRGLRVYGRSDWKNIAMHFVKTRTA--VSSHAQKY 89
                                  *****************************99998..99999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.5044094IPR017930Myb domain
SuperFamilySSF466891.25E-104194IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-64483IPR009057Homeodomain-like
TIGRFAMsTIGR015576.0E-114493IPR006447Myb domain, plants
SMARTSM007179.7E-74492IPR001005SANT/Myb domain
PfamPF002496.1E-64889IPR001005SANT/Myb domain
CDDcd001672.40E-64889No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MQREVLDDDP AMGNMDVLLG PVNVVDTTRA RRQPPRYPRA LRNKGRFWST GEHRQFLRGL  60
RVYGRSDWKN IAMHFVKTRT AVSSHAQKYY RRQESGVARQ QYSINDVSLY DAEPWAAPTN  120
NSSGSWETLS LAGGDYNNSN GYIAFGQQAP AQPALTMNNP APAMNNSAPT MNNTTPAMNY  180
TALAMNYTDP P
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A3L6S5I45e-38A0A3L6S5I4_PANMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP84230133