PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGMP456
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 336: /----- Pahal.C01395.1 [Panicum hallii] (2) /-91-+ | \----- Pavir.J314000.1.p [Panicum virgatum] (27) /-93-+ | \---------- Do020552.1 [Dichanthelium oligosanthes] (151) | /-85-+ /---------- Seita.9G350800.1.p [Setaria italica] (14) | | | | \-95-+ /----- Sevir.7G277400.1.p [Setaria viridis] (54) /-96-+ \-100+ | | \----- Seita.7G266200.1.p [Setaria italica] (98) | | | \-------------------- Sobic.009G048201.1.p [Sorghum bicolor] (192) | | /----- Zmw_sc00779.1.g00040.1 [Zoysia matrella] (29) | /-100+ | | \----- Zpz_sc01308.1.g00040.1.am.mk [Zoysia pacifica] (67) /-66-+ /-95-+ | | | \---------- Zpz_sc01865.1.g00010.1.am.mk [Zoysia pacifica] (70) | | | | | | /----- Zjn_sc00024.1.g00990.1.am.mk [Zoysia japonica] (93) | | /-100+----96---+ | | | | \----- Zjn_sc02644.1.g00010.1.am.mk [Zoysia japonica] (164) /-100-+ | | | | | \-83-+ \--------------- Zmw_sc01927.1.g00180.1 [Zoysia matrella] (170) | | | | | \-------------------- 462921848 [Eragrostis tef] (84) | | | \------------------------------ Oropetium_20150105_02978A [Oropetium thomaeum] (77) | | /----- ONIVA01G02970.1 [Oryza nivara] (19) | /-91-+ | | \----- BGIOSGA002747-PA [Oryza sativa indica] (24) | | | |---------- LOC_Os01g04750.1 [Oryza sativa japonica] (33) | | /---------51--------+ |---------- ORUFI01G02660.1 [Oryza rufipogon] (35) | | | | | |---------- KN541712.1_FGP001 [Oryza longistaminata] (57) | | /-89-+ | | | |---------- OGLUM01G02850.1 [Oryza glumaepatula] (95) | | | | | | | |---------- OMERI01G02480.1 [Oryza meridionalis] (99) | | | | | | /-80-+ |---------- OBART01G02610.1 [Oryza barthii] (130) | | | | | | | | | \---------- ORGLA01G0022400.1 [Oryza glaberrima] (120) | | | | | \-------97------+ | /----- OPUNC01G02240.1 [Oryza punctata] (121) | | \----82---+ | | \----- OB01G12600.1 [Oryza brachyantha] (155) | | | \-------------------- LPERR01G02360.1 [Leersia perrieri] (36) | | /-------------------- LPERR01G23470.1 [Leersia perrieri] (3) | | | | /---------- KN539193.1_FGP004 [Oryza longistaminata] (5) | | | | | | /----- LOC_Os01g49830.1 [Oryza sativa japonica] (18) | | | | | | |-50-+----- ONIVA01G31290.1 [Oryza nivara] (125) | | | | | | | \----- ORUFI01G30390.1 [Oryza rufipogon] (190) | /-86-+ | | | | | /----- OBART01G27360.1 [Oryza barthii] (80) | | | /-99-+-100+ | | | | | \----- ORGLA01G0225300.1 [Oryza glaberrima] (190) | | | | | | | | | | /----- BGIOSGA000982-PA [Oryza sativa indica] (136) | | | | |-79-+ | | | | | \----- OB01G36520.1 [Oryza brachyantha] (163) | /-75-+ \-100+ | | | | | |---------- OMERI01G25110.1 [Oryza meridionalis] (156) | | | | | | | | | \---------- OGLUM01G31260.1 [Oryza glumaepatula] (169) | | | | | | | \--------------- OPUNC01G27280.1 [Oryza punctata] (127) | | | | | | /----- PH01001971G0060 [Phyllostachys heterocycla] (25) | | \--------100--------+ | | \----- PH01000581G0530 [Phyllostachys heterocycla] (76) | | | | /----- MLOC_44012.1 [Hordeum vulgare] (10) | | /-100+ | | | \----- Traes_3B_174B7D5D2.1 [Triticum aestivum] (41) | |---------99--------+ | | | /----- Bradi2g47220.1.p [Brachypodium distachyon] (87) | | \-100+ | | \----- Brast01G176300.1.p [Brachypodium stacei] (193) | | | /-------86------+ /----- Do029277.1 [Dichanthelium oligosanthes] (11) | | | /-100+ | | | | \----- Do004006.1 [Dichanthelium oligosanthes] (13) | | | /-84-+ | | | | | /----- Seita.5G280700.1.p [Setaria italica] (42) | | | | \-100+ | | | | \----- Sevir.5G283200.1.p [Setaria viridis] (64) | | | /----66---+ | | | | | /----- Pavir.5NG454300.1.p [Panicum virgatum] (110) | | | | | /-99-+ | | | | | | \----- Pavir.5KG484500.1.p [Panicum virgatum] (146) | | | | \-80-+ | | | | \---------- Pahal.E02036.1 [Panicum hallii] (197) | | | | | | | | /-------------------- Oropetium_20150105_11517A [Oropetium thomaeum] (17) | | | | | | | | | | /----- GRMZM2G018336_P01 [Zea mays] (47) | | | | | /-100+ | | | |-69-+ | \----- GRMZM2G065538_P01 [Zea mays] (71) | | \-90-+ | /-97-+ | | | | | \---------- Sobic.003G265200.1.p [Sorghum bicolor] (79) | | | \-100+ | | | \--------------- GRMZM2G169654_P01 [Zea mays] (122) | | | | | | /----- Zmw_sc05201.1.g00030.1 [Zoysia matrella] (21) | | | /-93-+ | | | | \----- Zpz_sc02430.1.g00080.1.am.mk [Zoysia pacifica] (111) | | | /-100+ | | | | | /----- Zjn_sc00029.1.g03010.1.sm.mk [Zoysia japonica] (89) | | | | \-100+ | | | | \----- Zmw_sc03678.1.g00050.1 [Zoysia matrella] (141) | | \---100---+ | | | /----- Zmw_sc00880.1.g00190.1 [Zoysia matrella] (65) | | | /-100+ | | | | \----- Zmw_sc01665.1.g00110.1 [Zoysia matrella] (188) | | \-100+ | | | /----- Zjn_sc00011.1.g00630.1.sm.mk [Zoysia japonica] (182) | | \-100+ | | \----- Zpz_sc00444.1.g00210.1.am.mk [Zoysia pacifica] (220) | | | | /------------------------------ OB05G32250.1 [Oryza brachyantha] (4) | | | | | | /----- OGLUM05G26380.1 [Oryza glumaepatula] (6) | | | /----98---+ | | | | \----- OMERI05G22110.1 [Oryza meridionalis] (74) | | | | | | /--83-+ /-76-+ /----- BGIOSGA020315-PA [Oryza sativa indica] (32) | | | | | | /-74-+ | | | | | | | \----- ONIVA05G26000.1 [Oryza nivara] (73) | | | | /-82-+ \-100+ | | | | | | \---------- LOC_Os05g47650.1 [Oryza sativa japonica] (137) | | /-99-+ | | | | | | | \-80-+ \-------------------- OMERI08G00420.1 [Oryza meridionalis] (66) | /-53-+ | | | | | | | | \------------------------- OPUNC05G22370.1 [Oryza punctata] (171) | | |-91-+ | | | | | \------------------------------------ LPERR05G20600.1 [Leersia perrieri] (200) | | | | | | | | /----- PH01000297G0830 [Phyllostachys heterocycla] (134) | | | \----------------100----------------+ | | | \----- PH01000024G2370 [Phyllostachys heterocycla] (178) | | | | | | /---------- GRMZM2G159592_P01 [Zea mays] (7) | | | | | | |-----------------87----------------+ /----- GRMZM2G059939_P02 [Zea mays] (53) | | | \-97-+ | | | \----- Sobic.009G221400.1.p [Sorghum bicolor] (199) | | | | | | /----- Zjn_sc00027.1.g02710.1.sm.mk [Zoysia japonica] (22) | | | /-87-+ | | | | \----- Zmw_sc00607.1.g00060.1 [Zoysia matrella] (150) | | | | | | | /-100+---------- Zpz_sc05219.1.g00010.1.am.mk [Zoysia pacifica] (40) | | | | | | | | | \---------- Zmw_sc04894.1.g00010.1 [Zoysia matrella] (187) | | |--------------90--------------+ | | | | /----- Zmw_sc02967.1.g00140.1 [Zoysia matrella] (78) | | | | | | | | \---100---+----- Zjn_sc00012.1.g02500.1.am.mk [Zoysia japonica] (86) | | | | | | | \----- Zpz_sc01350.1.g00230.1.sm.mk [Zoysia pacifica] (91) | | | | | | /--------------- Do012302.1 [Dichanthelium oligosanthes] (37) | | | | | | | | /----- Pavir.3KG280900.1.p [Panicum virgatum] (119) | | | /-76-+ /-100+ | | | | | | \----- Pavir.9NG290100.1.p [Panicum virgatum] (152) | | | | \-100+ | | |-----------100-----------+ \---------- Pahal.C02061.1 [Panicum hallii] (174) | | | | | | | | /----- Seita.3G158300.1.p [Setaria italica] (140) | | | \------100-----+ | | | \----- Sevir.3G161500.1.p [Setaria viridis] (186) | | | | | | /----- Traes_1BL_F14523046.1 [Triticum aestivum] (38) | | |-------------------100------------------+ | | | \----- Traes_1BL_60A56C455.1 [Triticum aestivum] (115) | | | | | | /----- 462944244 [Eragrostis tef] (131) | | |-------------------100------------------+ | | | \----- 462921758 [Eragrostis tef] (230) | | | | | |---------------------------------------------- Oropetium_20150105_03987A [Oropetium thomaeum] (138) | | | | | | /----- Bradi2g17610.1.p [Brachypodium distachyon] (145) | | \-------------------100------------------+ | | \----- Brast08G036100.1.p [Brachypodium stacei] (179) | | | | /----- PDK_30s1086741g004 [Phoenix dactylifera] (9) | | /-100+ | | | \----- XP_010926493.1 [Elaeis guineensis] (194) /-53-+-50-+ /------100-----+ | | | | | /----- PDK_30s663521g001 [Phoenix dactylifera] (149) | | | | \-100+ | | | | \----- XP_010916479.1 [Elaeis guineensis] (176) | | | | | | | | /--------------- GSMUA_Achr10P19690_001 [Musa acuminata] (58) | | |------------69-----------+ | | | | | | /----- GSMUA_Achr3P21100_001 [Musa acuminata] (81) | | | | /-96-+ /-58-+ | | | | | | | \----- GSMUA_Achr2P22560_001 [Musa acuminata] (90) | | | | | \-95-+ | | | \-91-+ \---------- GSMUA_Achr6P09880_001 [Musa acuminata] (185) | | | | | | | \-------------------- GSMUA_Achr1P21250_001 [Musa acuminata] (85) | | | | | | /---------- Zosma48g00040.1 [Zostera marina] (15) | | | | | | |-------------------56-------------------+ /----- Spipo0G0165900 [Spirodela polyrhiza] (50) | | | \-100+ | | | \----- Spipo19G0026300 [Spirodela polyrhiza] (157) | | | | | | /----- GSMUA_Achr4P06710_001 [Musa acuminata] (16) | | | /-89-+ | | | | \----- GSMUA_Achr3P29380_001 [Musa acuminata] (140) | | | /----99---+ | | | | | /----- GSMUA_Achr4P03670_001 [Musa acuminata] (68) | | | | \-100+ | | | | \----- GSMUA_Achr9P21470_001 [Musa acuminata] (83) | | |--------------70--------------+ | | | | /--------------- GSMUA_Achr6P01420_001 [Musa acuminata] (44) | | | | | | | | | | /----- GSMUA_Achr1P05400_001 [Musa acuminata] (117) | | | \-78-+ /-68-+ | | | | | \----- GSMUA_Achr5P09950_001 [Musa acuminata] (158) | | | \-78-+ | | | \---------- GSMUA_AchrUn_randomP06880_001 [Musa acuminata] (189) | | | | | |--------------------------------------------------- Zosma178g00500.1 [Zostera marina] (59) | | | | | | /----- PEQU_27747 [Phalaenopsis equestris] (61) | | |----------------------96---------------------+ | | | \----- PEQU_06474 [Phalaenopsis equestris] (62) | | | | | |--------------------------------------------------- Aco006706.1 [Ananas comosus] (92) | | | | | |--------------------------------------------------- XP_010924129.1 [Elaeis guineensis] (94) | | | | | | /----- XP_010923453.1 [Elaeis guineensis] (114) | | |----------------------74---------------------+ | | | \----- PDK_30s1014021g004 [Phoenix dactylifera] (173) | | | | | |--------------------------------------------------- Zosma99g00770.1 [Zostera marina] (148) | | | | | |--------------------------------------------------- Aco012003.1 [Ananas comosus] (153) | | | | | |--------------------------------------------------- Spipo18G0031000 [Spirodela polyrhiza] (162) | | | | | \--------------------------------------------------- Zosma214g00470.1 [Zostera marina] (184) | | | | /---------- PH01000015G1290 [Phyllostachys heterocycla] (8) | | | | |---------------------100---------------------+ /----- PH01001568G0220 [Phyllostachys heterocycla] (97) | | \-96-+ | | \----- PH01000281G0890 [Phyllostachys heterocycla] (159) | | | | /----- Traes_4DL_59B1C9052.1 [Triticum aestivum] (12) | | /-78-+ | | | \----- MLOC_63261.1 [Hordeum vulgare] (183) | | /-100+ | | | \---------- TRIUR3_27886-P1 [Triticum urartu] (113) | | | | |-------------------100------------------+ /----- TRAES3BF062700040CFD_t1 [Triticum aestivum] (46) | | | /-100+ | | | | \----- TRAES3BF062600010CFD_t1 [Triticum aestivum] (142) | | \-100+ | | \---------- MLOC_5512.1 [Hordeum vulgare] (147) | | | | /----- Brast01G388200.1.p [Brachypodium stacei] (26) | |------------------------100-----------------------+ | | \----- Bradi2g02710.1.p [Brachypodium distachyon] (130) | | | | /--------------- Pavir.5NG098400.1.p [Panicum virgatum] (28) | | | | | | /----- Pavir.5KG097300.1.p [Panicum virgatum] (45) --81-+ | /-93-+ /-76-+ | | | | | \----- Pavir.5KG112000.1.p [Panicum virgatum] (168) | | | \-100+ | | /-93-+ \---------- Pavir.5KG097700.1.p [Panicum virgatum] (143) | | | | | | | \-------------------- Pahal.E03917.1 [Panicum hallii] (31) | | | | | | /----- Zjn_sc00005.1.g06230.1.am.mk [Zoysia japonica] (34) | | | /-91-+ | | | | \----- Zmw_sc01354.1.g00180.1 [Zoysia matrella] (160) | | |------94------+ | | | | /----- Zjn_sc03432.1.g00010.1.am.mk [Zoysia japonica] (133) | | | \-100+ | |--------------50--------------+ \----- Zjn_sc00011.1.g04110.1.sm.mk [Zoysia japonica] (165) | | | | | | /----- Seita.5G096900.1.p [Setaria italica] (63) | | |--------100--------+ | | | \----- Sevir.5G095000.1.p [Setaria viridis] (150) | | | | | |------------------------- 462956801 [Eragrostis tef] (135) | | | | | | /----- 462880850 [Eragrostis tef] (167) | | \---------50--------+ | | \----- Oropetium_20150105_07082A [Oropetium thomaeum] (172) | | | | /----- Pavir.5KG097800.1.p [Panicum virgatum] (43) | | /-100+ | | | \----- Pavir.5KG097500.1.p [Panicum virgatum] (116) | | /-100+ | | | \---------- Pavir.5NG098700.1.p [Panicum virgatum] (55) | | /-51-+ | | | \--------------- Pahal.E03916.1 [Panicum hallii] (75) | | | | |----------------100----------------+ /----- Seita.5G096800.1.p [Setaria italica] (48) | | | /-100+ | | | | \----- Sevir.5G094900.1.p [Setaria viridis] (100) | | \----52---+ | | \---------- Do012042.1 [Dichanthelium oligosanthes] (110) | | | | /----- LOC_Os01g04800.1 [Oryza sativa japonica] (51) | | | | | /-100+----- BGIOSGA002753-PA [Oryza sativa indica] (72) | | | | | | /---100---+ \----- ORUFI01G02680.1 [Oryza rufipogon] (129) | | | | | | | \---------- OMERI01G02500.1 [Oryza meridionalis] (196) | | | | | | /---------- ORGLA01G0022600.1 [Oryza glaberrima] (69) | | /-100+ | | | | | /-95-+ /----- OBART01G02620.1 [Oryza barthii] (180) | | | | | \-50-+ | | | | | \----- OGLUM01G02860.1 [Oryza glumaepatula] (170) | | | \-100+ | | /-100+ |--------------- BGIOSGA002748-PA [Oryza sativa indica] (132) | | | | | | | | | \--------------- ONIVA01G02990.1 [Oryza nivara] (177) | | | | | | | | /----- OPUNC01G02270.1 [Oryza punctata] (118) | |------------55-----------+ \--------100--------+ | | | \----- OGLUM03G23890.1 [Oryza glumaepatula] (180) | | | | | |------------------------------ OB01G12610.1 [Oryza brachyantha] (160) | | | | | \------------------------------ LPERR01G02380.1 [Leersia perrieri] (166) | | | |-------------------------------------------------------- Oropetium_20150105_07081A [Oropetium thomaeum] (56) | | | | /----- Zpz_sc00146.1.g00020.1.am.mk [Zoysia pacifica] (60) | | /-100+ | | | \----- Zmw_sc01354.1.g00140.1 [Zoysia matrella] (112) | | /-69-+ | | | \---------- Zjn_sc00005.1.g06240.1.am.mk [Zoysia japonica] (195) | |-------------------100------------------+ | | \--------------- Zmw_sc01022.1.g00090.1 [Zoysia matrella] (120) | | | | /----- Seita.5G096700.1.p [Setaria italica] (82) | |------------------------100-----------------------+ | | \----- Do021229.1 [Dichanthelium oligosanthes] (161) | | | |-------------------------------------------------------- Do003037.1 [Dichanthelium oligosanthes] (126) | | | \-------------------------------------------------------- Sobic.003G078100.1.p [Sorghum bicolor] (128) | | /----- Bradi2g02720.1.p [Brachypodium distachyon] (49) \--------------------------100--------------------------+ \----- Brast01G388100.1.p [Brachypodium stacei] (52) Root part of tree: /------------------------------------------------------------------ Traes_3B_90BE2090B.1 [Triticum aestivum] (1) | |------------------------------------------------------------------ EMT06147 [Aegilops tauschii] (39) | | /------- (336) | /---------------------53--------------------+ | | \------- TRIUR3_24850-P1 [Triticum urartu] (144) | | | | /------- EMT06148 [Aegilops tauschii] (20) | | /-----------------100----------------+ | | | \------- Traes_4DL_872A1302F.1 [Triticum aestivum] (123) | | | | | | /------- TRAES3BF108500010CFD_t1 [Triticum aestivum] (23) | | | | + | | |------- Traes_3B_DF7E924991.1 [Triticum aestivum] (30) | | | /------100-----+ | | | | |------- TRAES3BF098200010CFD_t1 [Triticum aestivum] (96) | | | | | | |--100-+ | \------- Traes_3B_DF7E92499.1 [Triticum aestivum] (139) | /---65--+ | /--84--+ | | | | | | /------- TRIUR3_24851-P1 [Triticum urartu] (154) | | | | | | /--100--+ | | | | | | | \------- Traes_3AS_2E5380A2A.1 [Triticum aestivum] (198) | | | | /---82--+ \--91--+ | | | | | | \--------------- EMT31332 [Aegilops tauschii] (210) | | | | | | | | | \--82--+ \----------------------------- MLOC_75135.1 [Hordeum vulgare] (88) \--79--+ | | | | | /------- TRAES3BF098300010CFD_t1 [Triticum aestivum] (124) | | \-------------100-------------+ | | \------- MLOC_56567.1 [Hordeum vulgare] (175) | | | \--------------------------------------------------- MLOC_7940.1 [Hordeum vulgare] (181) | \----------------------------------------------------------- Traes_3AS_82DEC629B.1 [Triticum aestivum] (191) |