PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM70
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/------------------------------------------------------------------ evm.TU.contig_28448.1 [Carica papaya] (1) | |------------------------------------------------------------------ evm.TU.contig_26058.2 [Carica papaya] (231) | |------------------------------------------------------------------ evm.TU.contig_25049.2 [Carica papaya] (291) | | /------------------------------------------------------- Araha.4299s0003.1.p [Arabidopsis halleri] (2) | | | | /----- Cagra.2356s0007.1.p [Capsella grandiflora] (3) | | /--96-+ | | | \----- Carubv10006189m [Capsella rubella] (17) | | /-74-+ | | | | /----- Cagra.0114s0045.1.p [Capsella grandiflora] (119) | | | \--99-+ | | | \----- Carubv10011303m [Capsella rubella] (164) | | /--67-+ | | | | /----------- Csa17g029500.1 [Camelina sativa] (13) | | | | | | | | \-90-+ /----- Csa03g026440.1 [Camelina sativa] (58) | | | \--76-+ | | | \----- Csa14g027760.1 [Camelina sativa] (150) | | /-53-+ | | | | /----- Carubv10021360m [Capsella rubella] (5) | | | | /--70-+ | | | | | \----- Carubv10021540m [Capsella rubella] (52) | | | | /-76-+ | | /--51-+ | | \----------- Carubv10021762m [Capsella rubella] (234) | | | | \--87-+ | | | | \---------------- Carubv10022252m [Capsella rubella] (198) | | | | | | /-53-+ | /----- Araha.2296s0016.1.p [Arabidopsis halleri] (80) | | | | \----------88---------+ | | | | \----- AT1G22590.2 [Arabidopsis thaliana] (290) | | | | | | | \--------------------------------- Bostr.12659s0111.1.p [Boechera stricta] (375) | | | | | | /--------------------------------- 676753760 [Sisymbrium irio] (43) | | | | | | | | /----- RrC12469_p1 [Raphanus raphanistrum] (85) | | | | /----100---+ | | | | | \----- Rsa1.0_00433.1_g00001.1 [Raphanus sativus] (95) | | | | | | | | | | /----- XP_013584191.1 [Brassica oleracea] (145) | | | | /-100-+ /-100-+ | | | | | | | \----- GSBRNA2T00119499001 [Brassica napus] (395) | | | | | | | | | |-69-+ | \-100+----------- GSBRNA2T00015742001 [Brassica napus] (281) | | | | /-59-+ | | |-------59-------+ | | | \----------- XP_009115622.1 [Brassica rapa] (412) | | | | | | | | | | | \---------------------- Tp1g20080 [Thellungiella parvula] (120) | | | | | | | | | | /----- RrC5951_p2 [Raphanus raphanistrum] (96) | | | | | /----100---+ | | | | | | \----- Rsa1.0_01533.1_g00002.1 [Raphanus sativus] (310) | | | | | | | | | \--53-+ /--97-+ /----- XP_009103230.1 [Brassica rapa] (136) | | | | | | /--63-+ | | | | | | | \----- GSBRNA2T00033125001 [Brassica napus] (366) | | | |-53-+ \-100+ | | | | | \----------- XP_013596119.1 [Brassica oleracea] (335) | | | | | | | | | \---------------------- Thhalv10008961m [Eutrema salsugineum] (350) | | | | | | | \--------------------------- KFK44352.1 [Arabis alpina] (331) | | | | | \-------------------------------------- AA39G00447 [Aethionema arabicum] (268) | | | | /----- Thhalv10002956m [Eutrema salsugineum] (4) | | /--85-+ | | | \----- Thhalv10002996m [Eutrema salsugineum] (38) | | /----97----+ | | | \----------- Thhalv10002789m [Eutrema salsugineum] (333) | | | | | | /----- Thhalv10019449m [Eutrema salsugineum] (36) | | |-------52-------+ | | | \----- Thhalv10019758m [Eutrema salsugineum] (57) | | | | | | /----- Thhalv10019579m [Eutrema salsugineum] (42) | | | /--87-+ | | | | \----- Thhalv10002346m [Eutrema salsugineum] (294) | | | /-72-+ | | | | \----------- Thhalv10002350m [Eutrema salsugineum] (140) | | |--65-+ | | | | /----- Thhalv10002353m [Eutrema salsugineum] (140) | | | \----91----+ | | | \----- Thhalv10002352m [Eutrema salsugineum] (330) | | | | | |---------------------- Thhalv10019731m [Eutrema salsugineum] (49) | |---------------62---------------+ | | |---------------------- Thhalv10019667m [Eutrema salsugineum] (62) | | | | | | /----- Thhalv10019833m [Eutrema salsugineum] (88) | | |-------97-------+ | | | \----- Thhalv10002349m [Eutrema salsugineum] (337) | | | | | |---------------------- Thhalv10019681m [Eutrema salsugineum] (134) | | | | | | /----- Thhalv10019810m [Eutrema salsugineum] (135) | | |-------97-------+ | | | \----- Thhalv10019516m [Eutrema salsugineum] (263) | | | | | |---------------------- Thhalv10019751m [Eutrema salsugineum] (151) | | | | | |---------------------- Thhalv10019451m [Eutrema salsugineum] (157) | | | | | \---------------------- Thhalv10019692m [Eutrema salsugineum] (185) | | | | /----- evm.TU.contig_40189.1 [Carica papaya] (6) | | /--98-+ | | | \----- evm.TU.contig_39415.1 [Carica papaya] (77) | | /-76-+ | | | \----------- evm.model.supercontig_51.120 [Carica papaya] (46) | | /--74-+ | | | \---------------- evm.TU.contig_36543.1 [Carica papaya] (285) | | | | |---------------55---------------+ /----- evm.model.supercontig_118.9 [Carica papaya] (65) | | | | | | \-------55-------+----- evm.model.supercontig_51.124 [Carica papaya] (299) | | | | | \----- evm.model.supercontig_1153.1 [Carica papaya] (323) | | | |------------------------------------------------------- Thhalv10004893m [Eutrema salsugineum] (7) | | | | /----------- GSBRNA2T00029566001 [Brassica napus] (8) | | | | | /-88-+ /----- XP_013610078.1 [Brassica oleracea] (130) | | | \--50-+ | | /--54-+ \----- XP_009114607.1 [Brassica rapa] (240) | | | | | |---------------50---------------+ \---------------- Rsa1.0_00317.1_g00004.1 [Raphanus sativus] (18) | | | | | \---------------------- RrC1763_p1 [Raphanus raphanistrum] (133) | | | |------------------------------------------------------- EcC016096.10 [Eucalyptus camaldulensis] (9) | | | | /----- evm.TU.contig_26058.1 [Carica papaya] (10) | | | | | /--68-+----- evm.TU.contig_36181.1 [Carica papaya] (320) | | | | | |---------------------69--------------------+ \----- evm.TU.contig_25049.1 [Carica papaya] (329) | | | | | \----------- evm.model.supercontig_185.7 [Carica papaya] (72) | | | | /----- Rsa1.0_03097.1_g00002.1 [Raphanus sativus] (11) | | /-100-+ | | | \----- RrC29350_p1 [Raphanus raphanistrum] (344) | | /-100+ | | | | /----- GSBRNA2T00066453001 [Brassica napus] (44) | | | \-100-+ | |------------------50------------------+ \----- XP_013630382.1 [Brassica oleracea] (55) | | | | | \---------------- Tp2g05320 [Thellungiella parvula] (372) | | | |------------------------------------------------------- Tp3g24480 [Thellungiella parvula] (12) | | | | /----- KFK44938.1 [Arabis alpina] (14) | |------------------------64-----------------------+ | | \----- KFK41101.1 [Arabis alpina] (73) | | | |------------------------------------------------------- AA40G00158 [Aethionema arabicum] (15) | | | |------------------------------------------------------- evm.model.supercontig_118.30 [Carica papaya] (16) | | | | /----- Csa08g027460.1 [Camelina sativa] (19) | | /--84-+ | | | \----- Csa08g026450.1 [Camelina sativa] (34) | | /----100---+ | | | | /----- Csa13g034660.1 [Camelina sativa] (117) | | | \--99-+ | | | \----- Csa13g034640.1 [Camelina sativa] (374) | | | | | /-57-+ /----- Carubv10008056m [Capsella rubella] (167) | | | | /--98-+ | | | | | \----- Carubv10003757m [Capsella rubella] (411) | | | | /-57-+ | | | | | \----------- Carubv10001920m [Capsella rubella] (187) | | | \--95-+ | |-------------63------------+ \---------------- Carubv10002555m [Capsella rubella] (359) | | | | | | /----- AT5G26630.1 [Arabidopsis thaliana] (130) | | |----------68---------+ | | | \----- Araha.2865s0001.1.p [Arabidopsis halleri] (181) | | | | | \--------------------------- Bostr.29827s0156.1.p [Boechera stricta] (144) | | | |------------------------------------------------------- Bostr.26959s0397.1.p [Boechera stricta] (20) | | | | /----- Neem_20801_f_1 [Azadirachta indica] (21) | | /-100-+ | | | \----- Neem_9433_f_1 [Azadirachta indica] (336) | |---------------------77--------------------+ | | | /----- orange1.1g038848m [Citrus sinensis] (83) | | \-100-+ | | \----- Ciclev10013876m [Citrus clementina] (147) | | | | /----------- Csa02g005130.1 [Camelina sativa] (22) | | | | | /-67-+ /----- Csa15g007310.1 [Camelina sativa] (174) | | | \--99-+ | | /--62-+ \----- Csa15g007320.1 [Camelina sativa] (383) | | | | | | | \---------------- Csa19g008410.1 [Camelina sativa] (220) | | | | | | /----- Csa19g008420.1 [Camelina sativa] (27) | | | | | | |-------52-------+----- Csa15g007340.1 [Camelina sativa] (37) | |---------------51---------------+ | | | | \----- Csa01g006800.1 [Camelina sativa] (71) | | | | | | /----- Csa16g030650.1 [Camelina sativa] (114) | | |-------91-------+ | | | \----- Csa01g006790.1 [Camelina sativa] (184) | | | | | \---------------------- Csa15g007330.1 [Camelina sativa] (414) | | | | /----- Thecc1EG042799t1 [Theobroma cacao] (23) | |-----------------------100-----------------------+ | | \----- Thecc1EG042848t1 [Theobroma cacao] (59) | | | | /----- Gorai.004G054700.1 [Gossypium raimondii] (24) | | /----------87---------+ | | | \----- Cotton_A_03202_BGI-A2_v1.0 [Gossypium arboreum] (278) | | | | | | /----- Gh_D08G2113 [Gossypium hirsutum] (33) | | | /----72----+ | | | | \----- Gorai.004G229700.1 [Gossypium raimondii] (350) | | /--85-+ | | | | | /--84-+ /----- Gorai.004G229600.1 [Gossypium raimondii] (228) | | | | | | /--58-+ | | | | | | | \----- Gh_D08G2112 [Gossypium hirsutum] (319) | | | | | \-57-+ | | | \-60-+ \----------- Gh_D08G2111 [Gossypium hirsutum] (238) | | | | | | | | /----- Gh_A08G1767 [Gossypium hirsutum] (66) | | /-85-+ \-------100------+ | | | | \----- Cotton_A_05132_BGI-A2_v1.0 [Gossypium arboreum] (218) | | | | | | | | /----- Gh_A10G1445 [Gossypium hirsutum] (122) | | | | /----84----+ | | | | | \----- Gorai.011G189000.1 [Gossypium raimondii] (360) | | | | | | | /--66-+ \-------89-------+ /----- Gorai.013G155300.1 [Gossypium raimondii] (182) | | | | | /--99-+ | | | | | | \----- Gh_D13G1416 [Gossypium hirsutum] (378) | | | | \-83-+ | | /-52-+ | \----------- Gorai.013G155200.1 [Gossypium raimondii] (384) | | | | | | | | | \-------------------------------------- Cotton_A_38716_BGI-A2_v1.0 [Gossypium arboreum] (321) | | | | | | | \-------------------------------------------- Cotton_A_05133_BGI-A2_v1.0 [Gossypium arboreum] (118) | |--52-+ | | | /----- Cotton_A_11922_BGI-A2_v1.0 [Gossypium arboreum] (210) | | | /--84-+ | | | | \----- Gh_A08G2260 [Gossypium hirsutum] (293) | | \------------------86-----------------+ | | | /----- Gh_D08G2627 [Gossypium hirsutum] (310) | | \--82-+ | | \----- Gorai.004G292000.1 [Gossypium raimondii] (379) | | | | /----- XP_009147196.1 [Brassica rapa] (25) | | /-100-+ | | | \----- GSBRNA2T00038536001 [Brassica napus] (188) | | /-100+ | | | \----------- XP_013584728.1 [Brassica oleracea] (35) | | /--89-+ | | | \---------------- Rsa1.0_00420.1_g00007.1 [Raphanus sativus] (223) | |---------------63---------------+ | | \---------------------- 676720600 [Sisymbrium irio] (354) | | | |------------------------------------------------------- Cotton_A_39419_BGI-A2_v1.0 [Gossypium arboreum] (26) | | | | /----- Thecc1EG023006t1 [Theobroma cacao] (28) | | /--88-+ | | | \----- Thecc1EG023041t1 [Theobroma cacao] (356) | | | | |---------------------50--------------------+----------- Thecc1EG022993t1 [Theobroma cacao] (82) | | | | | \----------- Thecc1EG008973t1 [Theobroma cacao] (111) | | | | /----- evm.TU.contig_35890.1 [Carica papaya] (29) | | /-------63-------+ | | | \----- evm.TU.contig_35795.1 [Carica papaya] (63) | | | | | | /----- evm.TU.contig_28448.2 [Carica papaya] (39) | |---------------99---------------+ /--56-+ | | | | \----- evm.TU.contig_43908.1 [Carica papaya] (430) | | | /-87-+ | | | | \----------- evm.TU.contig_24864.2 [Carica papaya] (112) | | \--82-+ | | \---------------- evm.model.supercontig_185.4 [Carica papaya] (139) | | | | /----- RrC9497_p1 [Raphanus raphanistrum] (30) | | /----98----+ | | | \----- Rsa1.0_11408.1_g00001.1 [Raphanus sativus] (217) | | | | | | /----- Rsa1.0_13724.1_g00002.1 [Raphanus sativus] (200) | | | | | | |----61----+----- Rsa1.0_16113.1_g00002.1 [Raphanus sativus] (216) | | /--53-+ | | | | | \----- Rsa1.0_23278.1_g00001.1 [Raphanus sativus] (262) | | | | | | | | /----- Rsa1.0_12282.1_g00001.1 [Raphanus sativus] (248) | | | | /-100-+ | | | | | \----- Rsa1.0_03526.1_g00003.1 [Raphanus sativus] (410) | | | \-68-+ | | | \----------- Rsa1.0_18257.1_g00002.1 [Raphanus sativus] (385) | | | | | |---------------------- RrC21298_p1 [Raphanus raphanistrum] (54) | | | | | | /----------- Rsa1.0_13392.1_g00001.1 [Raphanus sativus] (56) + | | | | | /-86-+----73----+ /----- Rsa1.0_07715.1_g00001.1 [Raphanus sativus] (94) | | | | \-100-+ | | | | \----- Rsa1.0_07715.1_g00002.1 [Raphanus sativus] (272) | | | | | | | |---------------------- RrC23124_p1 [Raphanus raphanistrum] (173) | | | | | | | |---------------------- Rsa1.0_24109.1_g00001.1 [Raphanus sativus] (190) | | | | | | /--83-+ |---------------------- Rsa1.0_10498.1_g00001.1 [Raphanus sativus] (219) | | | | | | | | | |---------------------- Rsa1.0_11422.1_g00002.1 [Raphanus sativus] (252) | | | | | | | | | \---------------------- Rsa1.0_22149.1_g00001.1 [Raphanus sativus] (352) | | | | | | /-78-+ | /----- RrC9299_p1 [Raphanus raphanistrum] (64) | | | | \---------100---------+ | | | | \----- Rsa1.0_00694.1_g00006.1 [Raphanus sativus] (362) | | | | | | | | /----- Rsa1.0_00420.1_g00008.1 [Raphanus sativus] (297) | | | \------------100------------+ | |-------57-------+ \----- RrC7195_p3 [Raphanus raphanistrum] (327) | | | | | | /----- XP_013584995.1 [Brassica oleracea] (110) | | | /-100-+ | | | | \----- GSBRNA2T00120014001 [Brassica napus] (415) | | \------------56------------+ | | | /----- GSBRNA2T00038534001 [Brassica napus] (141) | | \-100-+ | | \----- XP_009123630.1 [Brassica rapa] (233) | | | | /----- evm.model.supercontig_30.163 [Carica papaya] (31) | |-----------------------100-----------------------+ | | \----- evm.TU.contig_46342.1 [Carica papaya] (260) | | | |------------------------------------------------------- EcC026037.10 [Eucalyptus camaldulensis] (32) | | | |------------------------------------------------------- evm.model.supercontig_1750.2 [Carica papaya] (40) | | | | /----- RrC3302_p3 [Raphanus raphanistrum] (41) | | /----100---+ | | | \----- Rsa1.0_00896.1_g00015.1 [Raphanus sativus] (161) | | | | | /--90-+ /----- XP_009124958.1 [Brassica rapa] (298) | | | | /--97-+ | | | | | \----- GSBRNA2T00005999001 [Brassica napus] (490) | | | \-91-+ | | /-70-+ \----------- XP_013624445.1 [Brassica oleracea] (410) | | | | | | | | /----- GSBRNA2T00043985001 [Brassica napus] (194) | | | \-------100------+ | |-------------54------------+ \----- XP_009144110.1 [Brassica rapa] (391) | | | | | |--------------------------- 676720596 [Sisymbrium irio] (165) | | | | | \--------------------------- Tp3g04740 [Thellungiella parvula] (330) | | | | /----- GSBRNA2T00147713001 [Brassica napus] (45) | | /-100-+ | | | \----- XP_009151152.1 [Brassica rapa] (180) | | /-95-+ | | | | /----- XP_013597142.1 [Brassica oleracea] (271) | | | \-100-+ | |------------------68------------------+ \----- GSBRNA2T00133705001 [Brassica napus] (389) | | | | | | /----- RrC4073_p2 [Raphanus raphanistrum] (292) | | \----100---+ | | \----- Rsa1.0_00044.1_g00052.1 [Raphanus sativus] (386) | | | |------------------------------------------------------- evm.TU.contig_25049.5 [Carica papaya] (47) | | | | /---------------- Csa06g003110.1 [Camelina sativa] (48) | | | | | | /----------- Csa16g023380.1 [Camelina sativa] (50) | | | | | | | |----------- Csa14g048840.1 [Camelina sativa] (192) | | |-72-+ | |------------------51------------------+ | /----- Csa16g017430.1 [Camelina sativa] (269) | | | \--85-+ | | | \----- Csa07g016940.1 [Camelina sativa] (296) | | | | | | /----- Csa15g007300.1 [Camelina sativa] (84) | | \----100---+ | | \----- Csa19g008400.1 [Camelina sativa] (253) | | | | /----- evm.model.supercontig_30.164 [Carica papaya] (51) | |------------------------81-----------------------+ | | \----- evm.TU.contig_38760.1 [Carica papaya] (89) | | | |------------------------------------------------------- evm.model.supercontig_117.23 [Carica papaya] (53) | | | | /----- GSBRNA2T00028815001 [Brassica napus] (60) | | /--93-+ | | | \----- XP_013619903.1 [Brassica oleracea] (440) | | /-100+ | | | | /----- XP_009129908.1 [Brassica rapa] (290) | | | \-100-+ | |------------------98------------------+ \----- GSBRNA2T00120482001 [Brassica napus] (345) | | | | | | /----- RrC5887_p3 [Raphanus raphanistrum] (125) | | \----100---+ | | \----- Rsa1.0_02169.1_g00002.1 [Raphanus sativus] (392) | | | | /----- Cagra.1772s0002.1.p [Capsella grandiflora] (61) | |-----------------------100-----------------------+ | /-52-+ \----- Carubv10015167m [Capsella rubella] (326) | | | | | | /----- Ciclev10003090m [Citrus clementina] (67) | | |-----------------------100-----------------------+ | | | \----- orange1.1g040635m [Citrus sinensis] (398) | | | | | | /----- Cotton_A_35030_BGI-A2_v1.0 [Gossypium arboreum] (68) | | | /-100-+ | | | | \----- Cotton_A_16797_BGI-A2_v1.0 [Gossypium arboreum] (224) | | | /-66-+ | | | | | /----- Cotton_A_14818_BGI-A2_v1.0 [Gossypium arboreum] (214) | | | | \-100-+ | | | | \----- Gh_A11G2521 [Gossypium hirsutum] (341) | | |------------------57------------------+ | | | | /----- Gh_D13G1913 [Gossypium hirsutum] (127) | | | | /-100-+ | | | | | \----- Gorai.013G210300.1 [Gossypium raimondii] (162) | | | \-95-+ | | | | /----- Gorai.013G210600.1 [Gossypium raimondii] (311) | | | \-100-+ | | | \----- Gh_D13G1915 [Gossypium hirsutum] (334) | | | | | |------------------------------------------------------- Thhalv10022373m [Eutrema salsugineum] (69) | | | | | | /----- evm.model.supercontig_185.11 [Carica papaya] (70) | | | /--66-+ | | | | \----- evm.TU.contig_33457.2 [Carica papaya] (180) | | |---------------------99--------------------+ | | | \----------- evm.model.supercontig_185.2 [Carica papaya] (270) | | | | | | /----------- Eucgr.E01734.1.p [Eucalyptus grandis] (74) | | | | | | |---------------------50--------------------+ /----- Eucgr.E01736.1.p [Eucalyptus grandis] (183) | | | \--63-+ | | | \----- Eucgr.E01733.1.p [Eucalyptus grandis] (324) | | | | | | /----- Carubv10025317m [Capsella rubella] (75) | | | | | | | /--99-+----- Carubv10024608m [Capsella rubella] (100) | | | | | | | |--------------------100--------------------+ \----- Carubv10024482m [Capsella rubella] (420) | | | | | | | \----------- Carubv10024493m [Capsella rubella] (349) | | | | | | /----- AT5G26650.1 [Arabidopsis thaliana] (76) | | | /--85-+ | | | | \----- AT5G27960.1 [Arabidopsis thaliana] (239) | | | /-84-+ | | | | \----------- AT5G26580.1 [Arabidopsis thaliana] (371) | | | /--80-+ | | | | \---------------- Araha.8594s0001.1.p [Arabidopsis halleri] (256) | | | | | | | |---------------------- Bostr.29827s0158.1.p [Boechera stricta] (215) | | |---------------59---------------+ | | | | /----------- Carubv10001114m [Capsella rubella] (236) | | | | | | | | \----99----+ /----- Carubv10001166m [Capsella rubella] (237) | | | \--98-+ | | | \----- Carubv10003161m [Capsella rubella] (295) | | | | | | /----- Ciclev10024463m [Citrus clementina] (78) | | |-----------------------100-----------------------+ | | | \----- orange1.1g040642m [Citrus sinensis] (382) | | | | | |------------------------------------------------------- Thecc1EG026845t1 [Theobroma cacao] (79) | | | | | | /----- KFK29647.1 [Arabis alpina] (81) | | | /--91-+ | | | | \----- KFK29648.1 [Arabis alpina] (413) | | |---------------------89--------------------+ | | | \----------- KFK38000.1 [Arabis alpina] (199) | | | | | |------------------------------------------------------- evm.TU.contig_35868.1 [Carica papaya] (86) | | | | | | /----- Thecc1EG025670t1 [Theobroma cacao] (87) | | | /--87-+ | | | | \----- Thecc1EG025671t1 [Theobroma cacao] (166) | | | /-55-+ | | | | \----------- Thecc1EG025674t1 [Theobroma cacao] (396) | | |------------------59------------------+ | | | \---------------- Thecc1EG025676t1 [Theobroma cacao] (189) | | | | | | /----- Ciclev10013728m [Citrus clementina] (90) | | |------------------------95-----------------------+ | | | \----- Ciclev10006519m [Citrus clementina] (120) | | | | | |------------------------------------------------------- KFK40981.1 [Arabis alpina] (91) | | | | | | /----- AT5G48670.1 [Arabidopsis thaliana] (92) | | |------------------------59-----------------------+ | | | \----- Araha.69862s0001.1.p [Arabidopsis halleri] (480) | | | | | | /----- RrC19294_p1 [Raphanus raphanistrum] (93) | | | /----97----+ | | | | \----- Rsa1.0_00044.1_g00049.1 [Raphanus sativus] (170) | | | | | | | /--60-+ /----- XP_013596905.1 [Brassica oleracea] (266) | | | | | /-100-+ | | | | | | \----- GSBRNA2T00133701001 [Brassica napus] (365) | | | | \-100+ | | |---------------53---------------+ | /----- XP_009151151.1 [Brassica rapa] (340) | | | | \--83-+ | | | | \----- GSBRNA2T00147709001 [Brassica napus] (390) | | | | | | | \---------------------- Tp2g21290 [Thellungiella parvula] (154) | | | | | | /----- AT1G65330.1 [Arabidopsis thaliana] (97) | | | /--60-+ | | | | \----- Araha.63569s0001.1.p [Arabidopsis halleri] (284) | | | /-51-+ | | | | \----------- AT1G65300.1 [Arabidopsis thaliana] (300) | | |------------------52------------------+ | | | \---------------- Araha.54504s0001.1.p [Arabidopsis halleri] (232) | | | | | |------------------------------------------------------- evm.model.supercontig_1237.1 [Carica papaya] (98) | | | | | |------------------------------------------------------- Neem_21044_f_1 [Azadirachta indica] (99) | | | | | |------------------------------------------------------- AA10G00034 [Aethionema arabicum] (110) | | | | | |------------------------------------------------------- evm.model.supercontig_139.40 [Carica papaya] (160) | | | | | |------------------------------------------------------- evm.TU.contig_33457.1 [Carica papaya] (170) | | | | | | /----- 871928 [Arabidopsis lyrata] (190) | | |------------------------72-----------------------+ | | | \----- Araha.2716s0001.1.p [Arabidopsis halleri] (251) | | | | | |------------------------------------------------------- evm.TU.contig_40164.1 [Carica papaya] (113) | | | | | |------------------------------------------------------- Bostr.2570s0083.1.p [Boechera stricta] (115) | | | | | | /----- Bostr.2392s0039.1.p [Boechera stricta] (116) | | |------------------------78-----------------------+ | | | \----- Csa02g033460.1 [Camelina sativa] (193) | | | | | |------------------------------------------------------- Tp_un0779_001 [Thellungiella parvula] (121) | | | | | |------------------------------------------------------- evm.model.supercontig_34.41 [Carica papaya] (123) | | | | | | /----- Gh_D13G1541 [Gossypium hirsutum] (124) | | | /-100-+ | | | | \----- Gorai.013G168300.1 [Gossypium raimondii] (171) | | |---------------------80--------------------+ | | | \----------- Cotton_A_16798_BGI-A2_v1.0 [Gossypium arboreum] (289) | | | | | |------------------------------------------------------- Araha.2716s0002.1.p [Arabidopsis halleri] (126) | | | | | | /----- Gorai.009G302800.1 [Gossypium raimondii] (128) | | | /--93-+ | | | | \----- Gh_D05G2728 [Gossypium hirsutum] (249) | | | /-94-+ | | | | | /----- Cotton_A_34715_BGI-A2_v1.0 [Gossypium arboreum] (132) | | | | \--93-+ | | | | \----- Gh_A05G2461 [Gossypium hirsutum] (387) | | |------------------64------------------+ | | | |---------------- Thecc1EG036473t1 [Theobroma cacao] (242) | | | | | | | \---------------- Thecc1EG021050t1 [Theobroma cacao] (286) | | | | | | /----- Gh_A13G2300 [Gossypium hirsutum] (129) | | | /-100-+ | | | | \----- Cotton_A_35031_BGI-A2_v1.0 [Gossypium arboreum] (313) | | | | | | | | /----- Gorai.013G210400.1 [Gossypium raimondii] (137) | | |---------------------53--------------------+-100-+ | | | | \----- Gh_D13G1914 [Gossypium hirsutum] (258) | | | | | | | | /----- Gh_D13G1916 [Gossypium hirsutum] (346) | | | \-100-+ | | | \----- Gorai.013G210700.1 [Gossypium raimondii] (377) | | | | | | /----- Thhalv10012000m [Eutrema salsugineum] (131) | | | /--89-+ | | | | \----- Thhalv10023873m [Eutrema salsugineum] (196) | | | /-88-+ | | | | \----------- Thhalv10024119m [Eutrema salsugineum] (273) | | | /--77-+ | | | | \---------------- Thhalv10024162m [Eutrema salsugineum] (168) | | |---------------71---------------+ | | | \---------------------- Thhalv10027038m [Eutrema salsugineum] (270) | | | | | | /----- Gh_D10G1574 [Gossypium hirsutum] (138) | | | /-100-+ | | | | \----- Gorai.011G177600.1 [Gossypium raimondii] (470) | | |---------------------70--------------------+ | | | \----------- Cotton_A_28206_BGI-A2_v1.0 [Gossypium arboreum] (255) | | | | | |------------------------------------------------------- evm.model.supercontig_100.14 [Carica papaya] (142) | | | | | | /----- Araha.15483s0003.1.p [Arabidopsis halleri] (143) | | |------------------------80-----------------------+ | | | \----- AT2G28700.1 [Arabidopsis thaliana] (340) | | | | | | /----- evm.model.supercontig_265.5 [Carica papaya] (146) | | |------------------------57-----------------------+ | | | \----- evm.model.supercontig_265.1 [Carica papaya] (159) | | | | | | /----- Csa07g015790.1 [Camelina sativa] (148) | | | /--61-+ | | | | \----- Csa05g035690.1 [Camelina sativa] (175) | | |---------------------88--------------------+ | | | \----------- Csa16g016330.1 [Camelina sativa] (153) | | | | | | /----- 676782010 [Sisymbrium irio] (149) | | |------------------------72-----------------------+ \--51-+ | \----- 676782032 [Sisymbrium irio] (244) | | | |------------------------------------------------------- 676768882 [Sisymbrium irio] (150) | | | |------------------------------------------------------- AT3G05860.1 [Arabidopsis thaliana] (152) | | | | /----- evm.model.supercontig_185.8 [Carica papaya] (155) | | | | | /--86-+----- evm.TU.contig_35762.1 [Carica papaya] (343) | | | | | |---------------------52--------------------+ \----- evm.TU.contig_24864.1 [Carica papaya] (450) | | | | | \----------- evm.TU.contig_40008.1 [Carica papaya] (264) | | | |------------------------------------------------------- AT5G27810.1 [Arabidopsis thaliana] (156) | | | |------------------------------------------------------- evm.TU.contig_25253.2 [Carica papaya] (158) | | | |------------------------------------------------------- EcS735233.10 [Eucalyptus camaldulensis] (160) | | | | /----- 676768904 [Sisymbrium irio] (163) | | /-100-+ | | | \----- 676768896 [Sisymbrium irio] (226) | |--------------------100--------------------+ | | \----------- 676768890 [Sisymbrium irio] (376) | | | | /----- evm.TU.contig_25982.2 [Carica papaya] (169) | |------------------------99-----------------------+ | | \----- evm.model.supercontig_185.9 [Carica papaya] (261) | | | | /----- Cagra.1508s0040.1.p [Capsella grandiflora] (172) | | /-100-+ | | | \----- Carubv10011611m [Capsella rubella] (348) | |---------------------70--------------------+ | | \----------- Csa14g041570.1 [Camelina sativa] (381) | | | |------------------------------------------------------- evm.TU.contig_40499.2 [Carica papaya] (176) | | | | /----- GSBRNA2T00104403001 [Brassica napus] (177) | | /-100-+ | | | \----- XP_009144622.1 [Brassica rapa] (265) | | /-56-+ | | | \----------- GSBRNA2T00054797001 [Brassica napus] (246) | |------------------78------------------+ | | | /----- Rsa1.0_01426.1_g00007.1 [Raphanus sativus] (315) | | \----89----+ | | \----- RrC7133_p1 [Raphanus raphanistrum] (338) | | | |------------------------------------------------------- evm.TU.contig_31147.1 [Carica papaya] (178) | | | |------------------------------------------------------- Gh_Sca074205G01 [Gossypium hirsutum] (179) | | | |------------------------------------------------------- Tp3g04750 [Thellungiella parvula] (186) | | | |------------------------------------------------------- Thhalv10023913m [Eutrema salsugineum] (191) | | | |------------------------------------------------------- AA10G00033 [Aethionema arabicum] (195) | | | | /----- Carubv10001714m [Capsella rubella] (197) | | /-100-+ | | | \----- Cagra.0753s0004.1.p [Capsella grandiflora] (279) | | /-74-+ | | | \----------- Cagra.1777s0039.1.p [Capsella grandiflora] (250) | |------------------53------------------+ | | | /----- Araha.4685s0006.1.p [Arabidopsis halleri] (221) | | \----60----+ | | \----- Bostr.10273s0324.1.p [Boechera stricta] (328) | | | | /----- evm.TU.contig_28089.1 [Carica papaya] (230) | | /-100-+ | | | \----- evm.TU.contig_25253.1 [Carica papaya] (282) | |---------------------86--------------------+ | | \----------- evm.model.supercontig_185.12 [Carica papaya] (250) | | | |------------------------------------------------------- Thhalv10021183m [Eutrema salsugineum] (240) | | | | /----- Thhalv10019839m [Eutrema salsugineum] (280) | |------------------------53-----------------------+ | | \----- AA10G00036 [Aethionema arabicum] (397) | | | | /----- XP_010521160.1 [Tarenaya hassleriana] (210) | |------------------------70-----------------------+ | | \----- XP_010535244.1 [Tarenaya hassleriana] (312) | | | |------------------------------------------------------- Rsa1.0_23673.1_g00001.1 [Raphanus sativus] (211) | | | |------------------------------------------------------- KFK26432.1 [Arabis alpina] (212) | | | |------------------------------------------------------- XP_010546777.1 [Tarenaya hassleriana] (213) | | | |------------------------------------------------------- Tp6g04880 [Thellungiella parvula] (220) | | | |------------------------------------------------------- Tp3g04730 [Thellungiella parvula] (222) | | | | /----- Eucgr.B01824.1.p [Eucalyptus grandis] (225) | | /--78-+ | | | \----- EcS767755.10 [Eucalyptus camaldulensis] (399) | |--------------------100--------------------+ | | \----------- EcS670027.10 [Eucalyptus camaldulensis] (276) | | | |------------------------------------------------------- evm.model.supercontig_34.40 [Carica papaya] (227) | | | |------------------------------------------------------- evm.TU.contig_24608.1 [Carica papaya] (229) | | | | /----- evm.model.supercontig_265.6 [Carica papaya] (230) | |------------------------97-----------------------+ | | \----- evm.model.supercontig_265.3 [Carica papaya] (257) | | | |------------------------------------------------------- Tp_un0302_001 [Thellungiella parvula] (235) | | | |------------------------------------------------------- evm.TU.contig_35009.1 [Carica papaya] (243) | | | |------------------------------------------------------- evm.model.supercontig_117.19 [Carica papaya] (245) | | | |------------------------------------------------------- evm.model.supercontig_4.187 [Carica papaya] (247) | | | |------------------------------------------------------- evm.TU.contig_32899.1 [Carica papaya] (254) | | | |------------------------------------------------------- evm.model.supercontig_1256.1 [Carica papaya] (259) | | | |------------------------------------------------------- Eucgr.E01737.1.p [Eucalyptus grandis] (260) | | | |------------------------------------------------------- AT1G33070.1 [Arabidopsis thaliana] (267) | | | |------------------------------------------------------- evm.TU.contig_39804.1 [Carica papaya] (274) | | | | /----- Neem_18343_f_1 [Azadirachta indica] (275) | |-----------------------100-----------------------+ | | \----- Neem_35207_f_1 [Azadirachta indica] (370) | | | | /----- Gorai.007G363700.1 [Gossypium raimondii] (277) | | /-100-+ | | | \----- Gh_D11G3182 [Gossypium hirsutum] (368) | |---------------------86--------------------+ | | \----------- Cotton_A_29132_BGI-A2_v1.0 [Gossypium arboreum] (318) | | | |------------------------------------------------------- evm.TU.contig_25253.5 [Carica papaya] (280) | | | |------------------------------------------------------- evm.model.supercontig_117.18 [Carica papaya] (283) | | | |------------------------------------------------------- 676720592 [Sisymbrium irio] (287) | | | |------------------------------------------------------- Cotton_A_14817_BGI-A2_v1.0 [Gossypium arboreum] (288) | | | | /----- Gh_D11G3181 [Gossypium hirsutum] (320) | |-----------------------100-----------------------+ | | \----- Gorai.007G363600.1 [Gossypium raimondii] (339) | | | | /----- Csa01363s010.1 [Camelina sativa] (360) | |-----------------------100-----------------------+ | | \----- Csa08g027450.1 [Camelina sativa] (390) | | | |------------------------------------------------------- AT1G31630.1 [Arabidopsis thaliana] (370) | | | | /----- Cagra.1772s0003.1.p [Capsella grandiflora] (380) | |-----------------------100-----------------------+ | | \----- Carubv10014232m [Capsella rubella] (367) | | | |------------------------------------------------------- Tp6g04860 [Thellungiella parvula] (314) | | | |------------------------------------------------------- evm.model.supercontig_135.5 [Carica papaya] (316) | | | |------------------------------------------------------- evm.model.supercontig_185.6 [Carica papaya] (317) | | | |------------------------------------------------------- AA40G00157 [Aethionema arabicum] (322) | | | |------------------------------------------------------- evm.model.supercontig_100.10 [Carica papaya] (325) | | | |------------------------------------------------------- evm.TU.contig_44957.1 [Carica papaya] (332) | | | |------------------------------------------------------- evm.model.supercontig_135.3 [Carica papaya] (342) | | | |------------------------------------------------------- Cotton_A_23916_BGI-A2_v1.0 [Gossypium arboreum] (347) | | | |------------------------------------------------------- 676772498 [Sisymbrium irio] (351) | | | |------------------------------------------------------- Csa13g034650.1 [Camelina sativa] (353) | | | |------------------------------------------------------- Bostr.2570s0082.1.p [Boechera stricta] (355) | | | |------------------------------------------------------- evm.model.supercontig_100.9 [Carica papaya] (357) | | | |------------------------------------------------------- evm.model.supercontig_1643.1 [Carica papaya] (358) | | | |------------------------------------------------------- Tp2g21270 [Thellungiella parvula] (361) | | | |------------------------------------------------------- AT1G31640.1 [Arabidopsis thaliana] (363) | | | |------------------------------------------------------- evm.model.supercontig_117.24 [Carica papaya] (364) | | | |------------------------------------------------------- evm.model.supercontig_30.166 [Carica papaya] (369) | | | |------------------------------------------------------- Eucgr.H00042.1.p [Eucalyptus grandis] (373) | | | |------------------------------------------------------- Cotton_A_21862_BGI-A2_v1.0 [Gossypium arboreum] (380) | | | |------------------------------------------------------- evm.TU.contig_28448.4 [Carica papaya] (388) | | | |------------------------------------------------------- Thhalv10019481m [Eutrema salsugineum] (393) | | | |------------------------------------------------------- XP_013619870.1 [Brassica oleracea] (394) | | | |------------------------------------------------------- AA10G00035 [Aethionema arabicum] (400) | | | \------------------------------------------------------- Thecc1EG026842t1 [Theobroma cacao] (460) | \------------------------------------------------------------ evm.model.supercontig_358.1 [Carica papaya] (241) |