PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP374
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Subtree rooted at node 300: /--------------- Aco015166.1 [Ananas comosus] (2) | | /----- PDK_30s758851g001 [Phoenix dactylifera] (40) | /-100+ /-------------------97-------------------+ | \----- XP_010915409.1 [Elaeis guineensis] (160) | | | | | | /----- GSMUA_Achr8P20090_001 [Musa acuminata] (121) | \-50-+-100+ | | \----- GSMUA_Achr5P06550_001 [Musa acuminata] (131) | | | \---------- Zosma5g01920.1 [Zostera marina] (180) | | /------------------------- OMERI01G06500.1 [Oryza meridionalis] (3) | | | | /-------------------- OGLUM01G07380.3 [Oryza glumaepatula] (89) | /-100+ | | | | | /----- OBART01G06400.3 [Oryza barthii] (126) | | | | | | | \-100+ /-97-+----- BGIOSGA002186-PA [Oryza sativa indica] (147) | | | | | | | | /-88-+ \----- ONIVA01G07970.4 [Oryza nivara] (191) | /--99-+ | | | | | | \-100+ \---------- ORUFI01G06940.3 [Oryza rufipogon] (174) | | | | | | | \--------------- KN538747.1_FGP002 [Oryza longistaminata] (166) /-89-+ /-72-+ | | | | | \------------------------------ OPUNC01G06180.1 [Oryza punctata] (192) | | | | | | /-96-+ \------------------------------------ OB01G16410.1 [Oryza brachyantha] (17) | | | | | | | \----------------------------------------- LPERR01G06020.3 [Leersia perrieri] (142) | | | | | | /----- EMT22881 [Aegilops tauschii] (51) | | /-91-+ /-100+ | | | | | \----- TRAES3BF073700090CFD_t1 [Triticum aestivum] (78) | | | | /-100+ | | | | | | /----- Bradi2g06210.1.p [Brachypodium distachyon] (110) | | | | | \-100+ | | | \--------------78--------------+ \----- Brast01G349400.1.p [Brachypodium stacei] (186) | | | | | | | \--------------- PH01001892G0010 [Phyllostachys heterocycla] (72) | | | | | | /-------------------- 462900811 [Eragrostis tef] (11) | | | | | | | | /----- Zpz_sc00194.1.g00100.1.sm.mkhc [Zoysia pacifica] (74) | \-92-+ | /-100+ | | /---100---+ | \----- Zmw_sc01057.1.g00020.1 [Zoysia matrella] (164) | | | | /-100+ | | | | | | /----- Zjn_sc00026.1.g01880.1.sm.mkhc [Zoysia japonica] (160) | | | | | \-100+ | | | \-91-+ \----- Zmw_sc05542.1.g00030.1 [Zoysia matrella] (185) | | | | | | | \--------------- Oropetium_20150105_17972A [Oropetium thomaeum] (141) | | | | | | /----- Sevir.5G139600.1.p [Setaria viridis] (21) | | | /-100+ | \---------93---------+ | \----- Seita.5G141300.1.p [Setaria italica] (176) | | /----93---+ | | | \---------- Do006873.1 [Dichanthelium oligosanthes] (77) | | | | | | /---------- Pavir.5KG046400.1.p [Panicum virgatum] (55) | | /-95-+ | | | | | /-100+ /----- Pavir.5NG049400.1.p [Panicum virgatum] (82) | | | | | \-100+ | | | \-100+ \----- Pavir.5NG046500.1.p [Panicum virgatum] (173) | \-94-+ | | | \--------------- Pahal.E04354.1 [Panicum hallii] (168) | | | | /----- Sobic.003G028300.1.p [Sorghum bicolor] (87) | \--------100--------+ | \----- AC187157.4_FGP005 [Zea mays] (169) | | /---------- OPUNC12G16840.1 [Oryza punctata] (5) | | | |---------- OBART12G18630.1 [Oryza barthii] (13) | | | | /----- LOC_Os12g41860.1 [Oryza sativa japonica] (33) | | | | |-72-+----- BGIOSGA035845-PA [Oryza sativa indica] (171) | /-95-+ | | | | \----- ORUFI12G20830.1 [Oryza rufipogon] (175) | | | | | | /----- ONIVA12G17580.1 [Oryza nivara] (69) | | |-100+ | /-97-+ | \----- OGLUM12G20280.1 [Oryza glumaepatula] (183) | | | | | | | \---------- ORGLA12G0158900.1 [Oryza glaberrima] (110) | /-100+ | | | | \--------------- OMERI12G14040.1 [Oryza meridionalis] (39) | | | | /------100------+ \-------------------- OB12G25330.1 [Oryza brachyantha] (8) | | | | | \------------------------- LPERR12G15670.1 [Leersia perrieri] (97) | | | | /--------------- Traes_5BS_360DD5644.1 [Triticum aestivum] (19) | | | | | | /----- EMT11763 [Aegilops tauschii] (75) | | /-85-+ /-53-+ | | | | | \----- TRIUR3_26547-P1 [Triticum urartu] (184) | | | \-79-+ | | /-100+ \---------- Traes_5DS_50846FD0C.1 [Triticum aestivum] (124) | | | | | | | \-------------------- MLOC_58644.1 [Hordeum vulgare] (150) | | /----100---+ | /-61-+ | | /----- Brast10G017900.1.p [Brachypodium stacei] (43) | | | | \--------100--------+ | | | | \----- Bradi4g01887.1.p [Brachypodium distachyon] (145) | | | | | | | | /----- Zpz_sc00563.1.g00180.1.sm.mkhc [Zoysia pacifica] (23) | | | | /-100+ | | | | | \----- Zmw_sc06747.1.g00060.1 [Zoysia matrella] (152) | | | | /-100+ | | | | | | /----- Zjn_sc00105.1.g01290.1.sm.mkhc [Zoysia japonica] (35) | | | | | \-99-+ | | | | | \----- Zmw_sc02469.1.g00170.1 [Zoysia matrella] (172) | | | | | --82-+ | | | /-89-+ /----- Zpz_sc04592.1.g00020.1.sm.mkhc [Zoysia pacifica] (27) | | | | | | /-100+ | | \-66-+ | | | \----- Zmw_sc01742.1.g00130.1 [Zoysia matrella] (30) | | | | | | | | | /-97-+ \-100+---------- Zmw_sc02951.1.g00010.1 [Zoysia matrella] (96) | | | | | | | | | | | \---------- Zjn_sc00088.1.g01440.1.sm.mkhc [Zoysia japonica] (165) | | | | | | | | /-97-+ \-------------------- Oropetium_20150105_18232A [Oropetium thomaeum] (32) | | | | | | /-96-+ | | | /----- 462958393 [Eragrostis tef] (112) | | | | | \--------100--------+ | | | | | \----- 462878264 [Eragrostis tef] (114) | | | | | | | | | | /----- Seita.3G395000.1.p [Setaria italica] (29) | | | | | /---100---+ | | | | | | \----- Sevir.3G413200.1.p [Setaria viridis] (181) | | | \--99-+ | | | | | /-97-+ /----- Pavir.3NG283000.1.p [Panicum virgatum] (36) | | | | | | /-100+ | | | | | | | \----- Pavir.3KG537000.1.p [Panicum virgatum] (117) | | | | /-100+ \-100+ | | | | | | \---------- Pahal.C04735.1 [Panicum hallii] (188) | | | | | | | | | | | \-------------------- Do002533.1 [Dichanthelium oligosanthes] (81) | | | \-100+ | | | | /---------- GRMZM2G178102_P01 [Zea mays] (73) | | | | | | | | \------100-----+ /----- GRMZM2G003509_P01 [Zea mays] (134) | | | \-100+ | | | \----- Sobic.008G168100.1.p [Sorghum bicolor] (154) | | | | | \---------------------------------------------- PH01000183G0940 [Phyllostachys heterocycla] (197) | | | | /----- 462867419 [Eragrostis tef] (9) | | /---100---+ | | | \----- 462952195 [Eragrostis tef] (178) | | | | | /-84-+ /---------- Zmw_sc00616.1.g00080.1 [Zoysia matrella] (28) | | | | | | | | \-100+ /----- Zmw_sc01080.1.g00180.1 [Zoysia matrella] (31) | | | \-96-+ | | | \----- Zjn_sc00065.1.g01360.1.sm.mkhc [Zoysia japonica] (120) | /-85-+ /-97-+ | | | | | /---------- Zmw_sc00804.1.g00030.1 [Zoysia matrella] (63) | | | | | | | | | | | | /----- Zjn_sc00019.1.g02980.1.sm.mkhc [Zoysia japonica] (115) | | | | \---100---+-100+ | | | | | \----- Zmw_sc02178.1.g00030.1 [Zoysia matrella] (159) | | | | | | | | | \---------- Zpz_sc00018.1.g00390.1.sm.mkhc [Zoysia pacifica] (122) | | | | | | | /-97-+ /----- Pahal.I02450.1 [Panicum hallii] (14) | | | | | | | | | | | /-92-+----- Pavir.9KG074600.1.p [Panicum virgatum] (133) | | | | | | | | | | | | | \----- Pavir.9NG188400.1.p [Panicum virgatum] (146) | | | | | /-90-+ | | | | | | |---------- Sevir.9G157300.1.p [Setaria viridis] (25) | | | | | | | | | | | \----89---+ \---------- Seita.9G158800.1.p [Setaria italica] (153) | | | | | | | | | \--------------- Sobic.001G157400.1.p [Sorghum bicolor] (125) | | | | | | | | /----- EMT22839 [Aegilops tauschii] (37) | | | | | | | | | /-100+----- TRIUR3_06898-P1 [Triticum urartu] (68) | | | | | | | | | | | \----- Traes_5DL_8F7AC72B0.2 [Triticum aestivum] (161) | | | |--------100--------+ | | | | | /----- Brast02G242900.1.p [Brachypodium stacei] (61) | | | | \-100+ | | | | \----- Bradi1g13910.1.p [Brachypodium distachyon] (86) | | | | | | | | /-------------------- LPERR03G22530.1 [Leersia perrieri] (41) | | | | | | | \---------85---------+ | /---------- OGLUM03G27880.1 [Oryza glumaepatula] (76) | | | | | | | | | |---------- ORUFI03G28280.1 [Oryza rufipogon] (91) | | | | | | | | | | /----- LOC_Os03g43930.1 [Oryza sativa japonica] (99) | | | /-66-+ |-100+ | | | | | /-100+ \----- ORGLA03G0253300.1 [Oryza glaberrima] (157) | | | | | | | | | | | | | | /----- BGIOSGA013211-PA [Oryza sativa indica] (150) | | | | | | |-100+ | | | | | | | \----- ONIVA03G28370.1 [Oryza nivara] (127) | | | | | | | | | | | \-100+ \---------- OBART03G27200.1 [Oryza barthii] (113) | | |-79-+ | \-81-+ | | |--------------- OPUNC03G24840.1 [Oryza punctata] (136) | | | | | | | |--------------- OMERI03G00550.1 [Oryza meridionalis] (158) | | | | | | | \--------------- KN538706.1_FGP019 [Oryza longistaminata] (193) | | | | | \------------------------- OB03G35020.1 [Oryza brachyantha] (130) | | | | /----- PH01000996G0010 [Phyllostachys heterocycla] (64) | \-----------62-----------+ | \----- PH01000039G0640 [Phyllostachys heterocycla] (151) | | /----- Spipo5G0037000 [Spirodela polyrhiza] (18) | /-79-+ | | \----- Spipo32G0009800 [Spirodela polyrhiza] (156) |----------------------82---------------------+ | \---------- Zosma30g00880.1 [Zostera marina] (98) | | /-------------------- GSMUA_Achr7P01060_001 [Musa acuminata] (20) | | | /-100+ /--------------- GSMUA_Achr5P02420_001 [Musa acuminata] (123) | | | | | | \-88-+ /---------- GSMUA_Achr4P31660_001 [Musa acuminata] (135) | | | | | | \-64-+ /----- GSMUA_Achr2P13050_001 [Musa acuminata] (144) | | \-100+ | /-64-+ \----- GSMUA_Achr4P28360_001 [Musa acuminata] (155) | | | | | | /----- PDK_30s883981g003 [Phoenix dactylifera] (116) | | | /-57-+ | | | | \----- XP_010905420.1 [Elaeis guineensis] (167) | | \------99------+ |------------65-----------+ | /----- PDK_30s693742g001 [Phoenix dactylifera] (179) | | \-100+ | | \----- XP_010923678.1 [Elaeis guineensis] (194) | | | | /----- GSMUA_Achr8P02960_001 [Musa acuminata] (44) | \-----------51-----------+ | \----- Aco008700.1 [Ananas comosus] (162) | |-------------------------------------------------------- Aco005080.1 [Ananas comosus] (58) | | /----- PEQU_15387 [Phalaenopsis equestris] (65) |------------------------90------------------------+ | \----- PEQU_02925 [Phalaenopsis equestris] (88) | \-------------------------------------------------------- PEQU_20351 [Phalaenopsis equestris] (129) Subtree rooted at node 352: /----- (300) /----83---+ | \----- Spipo1G0002900 [Spirodela polyrhiza] (62) | /-55-+ /---------- PDK_30s929391g001 [Phoenix dactylifera] (79) | | | | \-92-+ /----- PDK_30s1194391g003 [Phoenix dactylifera] (143) /-92-+ \-100+ | | \----- XP_010920418.1 [Elaeis guineensis] (195) | | /------------88-----------+ \-------------------- GSMUA_Achr5P18530_001 [Musa acuminata] (95) | | | \------------------------- Aco007722.1 [Ananas comosus] (56) | | /----- LOC_Os10g33960.1 [Oryza sativa japonica] (4) | /-100+ | | \----- ORUFI10G14170.1 [Oryza rufipogon] (71) | | | |---------- OGLUM10G13240.1 [Oryza glumaepatula] (16) | | | |---------- OMERI10G10230.1 [Oryza meridionalis] (92) | | | /-53-+---------- OBART10G13430.2 [Oryza barthii] (128) | | | | | |---------- ONIVA10G14800.1 [Oryza nivara] (139) | | | | /-64-+ |---------- BGIOSGA033144-PA [Oryza sativa indica] (170) | | | | | | | \---------- ORGLA10G0115700.1 [Oryza glaberrima] (189) | /-66-+ | | | | \--------------- KN538857.1_FGP022 [Oryza longistaminata] (66) | | | | /-76-+ \-------------------- OPUNC10G11850.1 [Oryza punctata] (80) | | | /-80-+ /--78-+ \------------------------- LPERR10G09980.1 [Leersia perrieri] (15) | | | | | | | \------------------------------ OB10G20600.1 [Oryza brachyantha] (85) | | | | | | /----- Bradi3g28970.1.p [Brachypodium distachyon] (12) | | /-72-+ /------100-----+ | | | | | \----- Brast03G152300.1.p [Brachypodium stacei] (45) | | | | | | | | | | /----- Traes_1BL_43408C9B0.2 [Triticum aestivum] (24) | | | | | | | | | \------100------+ /-100+----- EMT25632 [Aegilops tauschii] (67) | | | | | | | | /-79-+ | /-73-+ \----- TRIUR3_27908-P1 [Triticum urartu] (100) | | | | | | | | | | | \-100+ \---------- Traes_1AL_0BE456AC0.1 [Triticum aestivum] (132) | | | | | | | | | \--------------- MLOC_61603.1 [Hordeum vulgare] (177) | | | | | | | | /----- PH01000305G0590 [Phyllostachys heterocycla] (38) | | | \----------------100----------------+ | | | \----- PH01002498G0270 [Phyllostachys heterocycla] (84) | | | | | | /----- Zmw_sc01600.1.g00130.1 [Zoysia matrella] (7) | \-78-+ /-65-+ | | | \----- Zpz_sc00155.1.g00360.1.am.mkhc [Zoysia pacifica] (140) | | /-72-+ | | | | /----- 462868679 [Eragrostis tef] (26) | | | \-100+ | | /-95-+ \----- 462849005 [Eragrostis tef] (46) | | | | | | | \--------------- Oropetium_20150105_19848A [Oropetium thomaeum] (10) | | | /-63-+ | | /----- Pahal.I03010.1 [Panicum hallii] (50) | | \------------94-----------+ /-100+ | | | | \----- Pavir.9KG182300.1.p [Panicum virgatum] (70) | | | /-100+ | | | | | /----- Sevir.9G219000.1.p [Setaria viridis] (83) | | | | \-100+ | | \-100+ \----- Seita.9G219700.1.p [Setaria italica] (120) | | | | | | /----- Sobic.001G217200.1.p [Sorghum bicolor] (59) | | \---100---+ | | \----- GRMZM2G469551_P01 [Zea mays] (137) | | | | /----- Pavir.9NG791600.1.p [Panicum virgatum] (6) | | /-100+ | | | \----- Pavir.9KG558300.1.p [Panicum virgatum] (149) | | /-100+ | | | \---------- Pahal.I00068.1 [Panicum hallii] (47) | | /-99-+ | | | | /----- Sevir.9G576100.1.p [Setaria viridis] (48) | | | \---100---+ | | | \----- Seita.9G572600.1.p [Setaria italica] (118) | | | | | | /----- Zpz_sc00278.1.g00310.1.am.mkhc [Zoysia pacifica] (53) | | | | | | | /-95-+----- Zmw_sc10007.1.g00010.1 [Zoysia matrella] (140) | | /-70-+ | | | | | | | \----- Zjn_sc00003.1.g15120.1.am.mkhc [Zoysia japonica] (148) | | | |----86---+ | | | | | /----- 462926787 [Eragrostis tef] (57) | | | | \-99-+ | | | | \----- Oropetium_20150105_21320A [Oropetium thomaeum] (182) | \--------------88--------------+ | | | \-------------------- Do020438.1 [Dichanthelium oligosanthes] (54) --100+ | | | /----- GRMZM2G042250_P03 [Zea mays] (170) | | | | \---------91--------+----- GRMZM2G109987_P02 [Zea mays] (138) | | | \----- Sobic.001G537300.2.p [Sorghum bicolor] (187) | | /----- ORUFI03G00510.1 [Oryza rufipogon] (22) | | | |----- LOC_Os03g01890.1 [Oryza sativa japonica] (52) | /-53-+ | | |----- ONIVA11G21180.1 [Oryza nivara] (94) | | | | | \----- OGLUM03G00670.1 [Oryza glumaepatula] (119) | | | | /----- OBART03G00720.1 [Oryza barthii] (49) | /-58-+-88-+ | | | \----- ORGLA03G0005300.1 [Oryza glaberrima] (190) | | | | | |---------- OMERI03G00480.1 [Oryza meridionalis] (93) | | | | /-99-+ | /----- KN539358.1_FGP006 [Oryza longistaminata] (163) | | | \-86-+ | | | \----- BGIOSGA011687-PA [Oryza sativa indica] (196) | | | | /-51-+ | /----- OPUNC03G00670.1 [Oryza punctata] (34) | | | \---100---+ | | | \----- OPUNC03G00630.1 [Oryza punctata] (60) |-----------------99----------------+ | | | \-------------------- OB03G10760.1 [Oryza brachyantha] (190) | | | \------------------------- LPERR03G00720.1 [Leersia perrieri] (42) | \------------------------------------------------------------- PH01000017G2520 [Phyllostachys heterocycla] (130) Root part of tree: /------------------------------------------------------------------ Traes_4DL_F064084A9.2 [Triticum aestivum] (1) | |------------------------------------------------------------------ EMT24595 [Aegilops tauschii] (90) + | /-------------------------------------------- (352) | | \---------100---------+ /---------------------- Traes_5AL_A5234EC05.1 [Triticum aestivum] (180) \---------100---------+ \---------------------- TRIUR3_14835-P1 [Triticum urartu] (111) |