PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT22881
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family HD-ZIP
Protein Properties Length: 812aa    MW: 88307.2 Da    PI: 6.6344
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT22881genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox25.71.9e-0820493257
              HHHHHC....TS-HHHHHHHHHHHHHHHHC CS
  Homeobox 32 eLAkkl....gLterqVkvWFqNrRakekk 57
              +L +++    +++ +q+kvWFqNrR +ek+
  EMT22881 20 QLVRECavlaNVDPKQIKVWFQNRRCREKQ 49
              45555555569*****************97 PP
2START173.21.7e-541373442204
               HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXXTT CS
     START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvaelqa 100
               +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+++ g a+ra+g+v m++a  v+e+l+d++ W ++++++e+++v+  g  g+++l +++l+a
  EMT22881 137 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPA-KVAEILKDRPLWLRDCRSMEVVNVLPAGsnGTIELLYMQLYA 236
               789*******************************************************.8888888888******************************** PP

               XX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHH CS
     START 101 lsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwv 197
               +++l+p Rdf+  Ry+  l +g++v++++S++s+q  p+    +++vR+e+lpSg+li+p+++g+s +++v+h dl+ +++++++r+l++s+++ ++k+ +
  EMT22881 237 PTTLAPaRDFWLMRYTSILDDGSLVVCERSLSSKQGGPSmplVQPFVRGEMLPSGFLIRPSDGGGSVIHIVDHLDLEPWSVPEVVRPLYESSAMVAQKMSM 337
               **************************************999999********************************************************* PP

               HHTXXXX CS
     START 198 atlqrqc 204
               a+l++++
  EMT22881 338 AALRYLR 344
               ***9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.2031950IPR001356Homeobox domain
CDDcd000866.49E-61951No hitNo description
PfamPF000467.0E-62049IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.606.6E-82354IPR009057Homeodomain-like
SuperFamilySSF466891.03E-62652IPR009057Homeodomain-like
CDDcd146861.93E-54382No hitNo description
PROSITE profilePS5084825.927127346IPR002913START domain
CDDcd088751.28E-72131345No hitNo description
Gene3DG3DSA:3.30.530.202.1E-22134341IPR023393START-like domain
SMARTSM002342.6E-44136346IPR002913START domain
SuperFamilySSF559612.06E-36136347No hitNo description
PfamPF018522.9E-52137344IPR002913START domain
PfamPF086703.1E-26668769IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 812 aa     Download sequence    Send to blast
MVTAREAREA AAAAHGAEQQ LVRECAVLAN VDPKQIKVWF QNRRCREKQR KESGRLQSLN  60
RKLTAMNKLL MEENDRLQKQ VSHLVYQNGY YRQQTHSAGL ATTDTSCESV VTSGQQNVVV  120
VVPPPPRDAS PAGLMSIAEE TLTEFLSKAT GTAVEWVQMP GMKPGPDSIG IIAISHGCAG  180
VAARACGLVG MEPAKVAEIL KDRPLWLRDC RSMEVVNVLP AGSNGTIELL YMQLYAPTTL  240
APARDFWLMR YTSILDDGSL VVCERSLSSK QGGPSMPLVQ PFVRGEMLPS GFLIRPSDGG  300
GSVIHIVDHL DLEPWSVPEV VRPLYESSAM VAQKMSMAAL RYLRQVAHED THSVITGWGR  360
QPAALRALSQ KLTRGLNETL GGLADDGWSV IESDGVDDVC ISVNSSPSKV MSCTATFSDG  420
LPMVSTGVLC AKASMLLQDV SPPSLLRFLR EHRSQWADSS LDAFFASALK PNFSNLPMSR  480
LGGFSGQVIL PLAHTSDPEE FLEVIKIGNA SNYQDTLMHR DLFLLQMYNG IDENTMGTCS  540
ELIFAPIDAS FGDDSPLLPS GFRIIPMESP LDTSSPNCTL DLASTLEVGT PGSRIPGHSR  600
SSSKAVMTIA FQFAFESHLQ DSVAAMARQY MRSIISSVQR IALALSSSHL VPHGSSRLLP  660
PVTPEAATLS RWIVQSYRFH FGAELIKAAD ASSGESALKA LWQHTSAILC CSLKAMPVLT  720
FANQSGLDML ETTLAALREI TMDKVLDYDQ GRKSLLCADL MASVAEQGTL ISSFPSPTHN  780
GATEKRTHWL SGFATPTYRC PIFRGYPLRF SL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3653120.0AK365312.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2033F15.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020183693.10.0homeobox-leucine zipper protein HOX29-like isoform X2
SwissprotA2WLR50.0HOX29_ORYSI; Homeobox-leucine zipper protein HOX29
TrEMBLM8CHZ50.0M8CHZ5_AEGTA; Homeobox-leucine zipper protein HOX29
STRINGEMT228810.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37438197
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.30.0HD-ZIP family protein