PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_02925
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family HD-ZIP
Protein Properties Length: 835aa    MW: 92452.5 Da    PI: 6.1228
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_02925genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.91.7e-181775357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                k  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  PEQU_02925 17 KYVRYTPEQVEALERVYNECPKPSSLRRQQLIRECpilsKIEPKQIKVWFQNRRCREKQ 75
                5678*****************************************************97 PP
2bZIP_1201.5e-06691111860
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                 rr+R++ ++e  +L++   +L+a Nk L +e+++l+k+v++l 
  PEQU_02925  69 RRCREKQRKEASNLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 111
                 9***************************************986 PP
3START148.18.1e-471633702204
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee++ e++kka+ ++  Wv+++ +++g++++ +++ s+++sg a+ra+g+v  ++ ++v +l d++  W +++++ ++l+v  ++  g ++  ++++
  PEQU_02925 163 IAEETLVEFLKKATGTAIDWVQMVGMKPGPDSIGIIAISRNCSGLAARACGFVSLEPKKVVDILKDRS-TWYRDCRSLDVLKVFHTAkgGHIEILYMQT 260
                 6789999***************************************************7777777777.***************99999********** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l+  Rdf+++Ry+ +l++g++vi+++S+++ +       +ss+vRae+lpSg+li+p+++ +  +++v+hvdl++++++++lr+l++s ++ ++
  PEQU_02925 261 YAPTTLALaRDFWTLRYSASLEDGSLVICERSLTPSTGGLAgptNSSFVRAEMLPSGYLIRPCEGSGAMIHIVDHVDLDASSVPEVLRPLYESPTVLAQ 359
                 *******99**************************9875444449****************************************************** PP

                 HHHHHHTXXXX CS
       START 194 ktwvatlqrqc 204
                 k+++++l++ +
  PEQU_02925 360 KMTLSALHHIR 370
                 *******9865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007115.0621276IPR001356Homeobox domain
SMARTSM003891.4E-151480IPR001356Homeobox domain
SuperFamilySSF466895.99E-171679IPR009057Homeodomain-like
CDDcd000862.57E-161777No hitNo description
PfamPF000465.1E-161875IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.604.0E-181975IPR009057Homeodomain-like
CDDcd146861.16E-669108No hitNo description
PROSITE profilePS5084824.579153353IPR002913START domain
SMARTSM002344.4E-36162372IPR002913START domain
Gene3DG3DSA:3.30.530.205.9E-20162353IPR023393START-like domain
SuperFamilySSF559611.22E-33163371No hitNo description
PfamPF018523.2E-44163370IPR002913START domain
SuperFamilySSF559616.46E-6410493No hitNo description
SuperFamilySSF559616.46E-6524595No hitNo description
PfamPF086705.0E-42696834IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 835 aa     Download sequence    Send to blast
MVFSDKDGGK QIMDSGKYVR YTPEQVEALE RVYNECPKPS SLRRQQLIRE CPILSKIEPK  60
QIKVWFQNRR CREKQRKEAS NLQTVNRKLT AMNKLLMEEN DRLQKQVSQL VYDNTFLHQQ  120
LNSTSLAATD TTCESMILGN QLQNPTPQPQ LMDANNTDGL LAIAEETLVE FLKKATGTAI  180
DWVQMVGMKP GPDSIGIIAI SRNCSGLAAR ACGFVSLEPK KVVDILKDRS TWYRDCRSLD  240
VLKVFHTAKG GHIEILYMQT YAPTTLALAR DFWTLRYSAS LEDGSLVICE RSLTPSTGGL  300
AGPTNSSFVR AEMLPSGYLI RPCEGSGAMI HIVDHVDLDA SSVPEVLRPL YESPTVLAQK  360
MTLSALHHIR QIGLETCGET SYVRGRQPAV LRTFSQRLSR GFNDAINGFS DDGWSFLGYD  420
GVEDVTITIN SSPSKLFGSH SRFAMLSSLG GGIVCAKASM LLQNVPPALL IRFLREHRSE  480
WADSLIDAYS TASLRGSTYE VPGFSDNSGF LANHVIIPLA YTVENEEFLE VIRVESHAFS  540
QDNVLSRDMY LLQLCEGIDE NSVGACAQLI FSPADQSFVD DAPLLPSGFR VIPLDLKADS  600
TPATRTLDLA STLEVSSGGT SRIVTDTTIS DGRSVLTIAF QFIFENHLQE SVVAMARQYT  660
RSVVASVQRV AMAITSSRLG RELGMKQPLG SPEAHTLARW ISSSYRFHSG IELIRTDSHC  720
ADSHLKLLWH HSDAITCCSL KACFANQSGL DMLETTLVAL QDITLENILD EDGRNVLSSV  780
FPKLMQQGFA YLPAGICMSS MGRPASYEQA MAWKVLDECN CQHCLAFMFI NWSFV
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020582785.10.0homeobox-leucine zipper protein HOX32-like
SwissprotQ6AST10.0HOX32_ORYSJ; Homeobox-leucine zipper protein HOX32
TrEMBLA0A2I0X7H50.0A0A2I0X7H5_9ASPA; Homeobox-leucine zipper protein HOX32
STRINGXP_008794452.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37438197
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Itoh J,Hibara K,Sato Y,Nagato Y
    Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice.
    Plant Physiol., 2008. 147(4): p. 1960-75
    [PMID:18567825]
  3. Li YY, et al.
    Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice.
    Rice (N Y), 2016. 9(1): p. 46
    [PMID:27624698]