PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Raphanus sativus
M-type_MADS FamilyPhylogenetic tree for domain ? help Back to Top |
---|
Subtree rooted at node 171: /---------- Rsa1.0_10498.1_g00001.1/10-50 (2) | |---------- Rsa1.0_13392.1_g00001.1/10-50 (4) | | /----- Rsa1.0_07715.1_g00001.1/10-50 (8) |-95-+ | \----- Rsa1.0_07715.1_g00002.1/10-50 (71) | | /----- Rsa1.0_23673.1_g00001.1/10-50 (18) | | |-59-+----- Rsa1.0_11422.1_g00002.1/10-50 (34) | | | \----- Rsa1.0_13724.1_g00002.1/10-50 (95) | |---------- Rsa1.0_23278.1_g00001.1/10-50 (23) /-99-+ | |---------- Rsa1.0_11408.1_g00001.1/10-50 (38) | | | |---------- Rsa1.0_13724.1_g00003.1/22-47 (43) | | | | /----- Rsa1.0_18257.1_g00002.1/10-50 (48) | | | | | |----- Rsa1.0_24109.1_g00001.1/10-50 (67) | |-51-+ /-70-+ | |----- Rsa1.0_16113.1_g00002.1/10-52 (93) | | | | | | | \----- Rsa1.0_22149.1_g00001.1/10-50 (170) | | | | | |---------- Rsa1.0_12282.1_g00001.1/10-50 (66) /-------------------99-------------------+ | | | | | \---------- Rsa1.0_03526.1_g00003.1/10-50 (150) | | | | | \--------------- Rsa1.0_00694.1_g00006.1/10-50 (72) | | | \-------------------- Rsa1.0_00420.1_g00008.1/10-50 (29) | | /----- Rsa1.0_10740.1_g00001.1/9-59 (3) | /---------99--------+ | | \----- Rsa1.0_01359.1_g00005.1/9-59 (39) | | | | /-------------------- Rsa1.0_00248.1_g00021.1/9-59 (7) | | | | | | /----- Rsa1.0_05241.1_g00003.1/24-74 (17) | | | /-78-+ | | | | \----- Rsa1.0_07505.1_g00001.1/24-74 (50) | | | /-99-+ | | | | \---------- Rsa1.0_02433.1_g00012.1/24-74 (190) | | |-100+ | | | \--------------- Rsa1.0_04195.1_g00003.1/22-72 (46) | |-74-+ | | | /----- Rsa1.0_19534.1_g00001.1/9-58 (32) | /------------58-----------+ | /-51-+ | | | | | \----- Rsa1.0_36951.1_g00001.1/9-58 (61) | | | | /-99-+ | | | | | \---------- Rsa1.0_26510.1_g00001.1/9-58 (94) | | | |-71-+ | | | | \--------------- Rsa1.0_18284.1_g00001.1/10-58 (44) | | | | | | | \-------------------- Rsa1.0_00040.1_g00037.1/9-59 (113) | | | | | |------------------------- Rsa1.0_05340.1_g00003.1/9-59 (15) | | | | | | /----- Rsa1.0_00073.1_g00002.1/9-55 (110) | | | /-69-+ | | | | \----- Rsa1.0_02553.1_g00002.1/44-83 (130) | | \------100-----+ | | \---------- Rsa1.0_00022.1_g00002.1/9-56 (110) | | | | /----- Rsa1.0_00041.1_g00013.1/15-62 (5) | | /-69-+ | | | \----- Rsa1.0_05374.1_g00001.1/3-41 (49) | | /-100+ | | | \---------- Rsa1.0_00087.1_g00110.1/14-62 (111) | |-----------------93----------------+ | | | /----- Rsa1.0_02405.1_g00007.1/1-38 (69) | | \---100---+ | | \----- Rsa1.0_02405.1_g00006.1/2-40 (112) | | | | /----- Rsa1.0_00095.1_g00022.1/14-51 (6) | | /-100+ | | | \----- Rsa1.0_00095.1_g00006.1/14-51 (42) | | /-84-+ | | | \---------- Rsa1.0_00362.1_g00007.1/22-56 (90) | | /-100+ | | | \--------------- Rsa1.0_00818.1_g00004.1/23-52 (80) | | | | | |-------------------- Rsa1.0_00887.1_g00007.1/15-53 (65) | | /-58-+ | | | |-------------------- Rsa1.0_01854.1_g00005.1/15-53 (86) | | | | | | | \-------------------- Rsa1.0_07319.1_g00001.1/15-53 (97) | | /-99-+ | | | |------------------------- Rsa1.0_00769.1_g00002.1/15-53 (47) | | | | | | /--71-+ \------------------------- Rsa1.0_00134.1_g00010.1/15-52 (96) | | | | | | | | /----- Rsa1.0_00072.1_g00017.1/14-53 (40) | | /-91-+ \-----------100----------+ | | | | \----- Rsa1.0_37341.1_g00001.1/14-53 (140) | | | | | | | \------------------------------------ Rsa1.0_11288.1_g00002.1/1-29 (33) | | | | /-80-+ /-99-+ /----- Rsa1.0_02758.1_g00002.1/12-49 (20) | | | | |----------------100----------------+ | | | | | \----- Rsa1.0_03102.1_g00002.1/11-49 (180) | | | | | | | | | \----------------------------------------- Rsa1.0_00730.1_g00002.1/16-55 (89) | | | | --99-+ | |-74-+ /----- Rsa1.0_00060.1_g00025.1/50-98 (21) | | | | /-94-+ | | | | | \----- Rsa1.0_04034.1_g00004.1/52-100 (35) | | | | /-70-+ | | | | | \---------- Rsa1.0_00139.1_g00034.1/81-129 (45) | | | \--------------100-------------+ | | | \--------------- Rsa1.0_06027.1_g00002.1/51-99 (55) | | | | | | /---------- Rsa1.0_02588.1_g00007.1/18-65 (9) | | | | | | |-------------------98-------------------+ /----- Rsa1.0_00122.1_g00026.1/10-53 (22) | | | \-100+ | | | \----- Rsa1.0_10151.1_g00001.1/19-61 (31) | | | | | | /----- Rsa1.0_01437.1_g00004.1/5-50 (13) | | | /----99---+ | | | | \----- Rsa1.0_01437.1_g00002.1/5-50 (68) | | | | | | |-----------------76----------------+ /---------- Rsa1.0_04281.1_g00001.1/16-62 (16) | | | | | | | | \-71-+ /----- Rsa1.0_02599.1_g00003.1/17-62 (53) |-77-+ | \-100+ | | | \----- Rsa1.0_03429.1_g00003.1/4-50 (54) | | | | | | /----- Rsa1.0_00111.1_g00068.1/12-57 (25) | | |----------------------83---------------------+ | | | \----- Rsa1.0_13506.1_g00002.1/11-57 (30) | | | | | | /----- Rsa1.0_01360.1_g00011.1/9-53 (28) | | | /-89-+ | | | | \----- Rsa1.0_00038.1_g00008.1/51-94 (75) | | |-------------------98-------------------+ | | | | /----- Rsa1.0_00015.1_g00081.1/9-32 (62) | | | \-100+ | | | \----- Rsa1.0_02019.1_g00002.1/9-53 (99) | | | | | | /----- Rsa1.0_00826.1_g00011.1/1-31 (60) | | |----------------------95---------------------+ | | | \----- Rsa1.0_02554.1_g00004.1/9-37 (120) | | | | | |--------------------------------------------------- Rsa1.0_00607.1_g00004.1/11-53 (77) | | | | | |--------------------------------------------------- Rsa1.0_00160.1_g00025.1/9-57 (81) | | | | | \--------------------------------------------------- Rsa1.0_23774.1_g00001.1/9-59 (88) | | | |-------------------------------------------------------- Rsa1.0_02169.1_g00002.1/10-49 (14) | | | \-------------------------------------------------------- Rsa1.0_00044.1_g00052.1/10-50 (19) | | /----- Rsa1.0_01943.1_g00008.1/11-60 (10) |---------------------------79--------------------------+ | \----- Rsa1.0_01654.1_g00004.1/10-60 (73) | | /----- Rsa1.0_00293.1_g00003.1/10-58 (11) | /---100---+ | | \----- Rsa1.0_00293.1_g00005.1/10-58 (87) | | |----------------------62---------------------+ /----- Rsa1.0_01533.1_g00002.1/10-50 (24) | | /-100+ | | | \----- Rsa1.0_00433.1_g00001.1/11-50 (64) | \-84-+ | \---------- Rsa1.0_00044.1_g00049.1/11-52 (100) | |------------------------------------------------------------- Rsa1.0_00317.1_g00004.1/10-51 (58) | | /---------- Rsa1.0_00420.1_g00007.1/11-50 (70) | | |------------------------94------------------------+ /----- Rsa1.0_03097.1_g00002.1/11-52 (83) | \-93-+ | \----- Rsa1.0_00896.1_g00015.1/11-52 (114) | | /----- Rsa1.0_01744.1_g00001.1/16-58 (74) |--------------------------100--------------------------+ | \----- Rsa1.0_00233.1_g00006.1/10-51 (79) | |------------------------------------------------------------- Rsa1.0_01440.1_g00008.1/12-52 (78) | \------------------------------------------------------------- Rsa1.0_01426.1_g00007.1/10-50 (160) Root part of tree: /------------------------------------------------------------------ Rsa1.0_35331.1_g00001.1/22-66 (1) | |------------------------------------------------------------------ Rsa1.0_04196.1_g00001.1/35-66 (57) | | /--------------------------------------------------- (171) | | | | /------------------------------------- Rsa1.0_00073.1_g00025.1/6-55 (12) | | | | | | /----------------------------- Rsa1.0_03930.1_g00002.1/11-58 (27) | | /--97--+ | | /---72--+ | | | /--------------- Rsa1.0_00802.1_g00014.1/15-61 (41) | | | | | | | | | | | \--100--+ /--57--+ /------- Rsa1.0_08500.1_g00001.1/12-58 (63) | | | | | | \---70--+ | | | | | | \------- Rsa1.0_01989.1_g00006.1/14-62 (84) | | | | \--59--+ | | \--98--+ |---------------------- Rsa1.0_00516.1_g00016.1/14-62 (91) | | | | | | | \---------------------- Rsa1.0_04489.1_g00005.1/33-80 (92) | | | +--95--+ | /------- Rsa1.0_00279.1_g00020.1/26-71 (36) | | | | | | \-----------------57-----------------+------- Rsa1.0_03316.1_g00003.1/35-80 (52) | | | | | \------- Rsa1.0_07073.1_g00002.1/20-57 (115) | | | | /------- Rsa1.0_03662.1_g00003.1/23-56 (26) | | /---96--+ | | | \------- Rsa1.0_00089.1_g00022.1/22-63 (98) | | | | \---------------------97--------------------+ /------- Rsa1.0_00181.1_g00021.1/11-53 (59) | | | | \---97--+------- Rsa1.0_05509.1_g00003.1/12-56 (76) | | | \------- Rsa1.0_00079.1_g00026.1/15-60 (82) | | /------- Rsa1.0_03276.1_g00003.1/24-67 (37) | | | |------- Rsa1.0_09034.1_g00001.1/1-27 (51) \----------------------------78----------------------------+ |------- Rsa1.0_01844.1_g00002.1/27-68 (56) | \------- Rsa1.0_07424.1_g00001.1/187-215 (85) |
Phylogenetic tree for protein ? help Back to Top |
---|
/------------------------------------------------------------------ Rsa1.0_10740.1_g00001.1 (1) | |------------------------------------------------------------------ Rsa1.0_01359.1_g00005.1 (49) | | /----- Rsa1.0_00122.1_g00026.1 (2) | /-100+ | | \----- Rsa1.0_10151.1_g00001.1 (65) | /---100---+ | | \---------- Rsa1.0_02588.1_g00007.1 (37) | | | | /----- Rsa1.0_01437.1_g00002.1 (5) | /--------------80--------------+ /-99-+ | | | | \----- Rsa1.0_01437.1_g00004.1 (66) | | | /-91-+ | | | | \---------- Rsa1.0_04281.1_g00001.1 (15) | | \-95-+ | | | /----- Rsa1.0_03429.1_g00003.1 (9) | | \---100---+ | | \----- Rsa1.0_02599.1_g00003.1 (70) | | | | /---------------------------------------------- Rsa1.0_00730.1_g00002.1 (7) | | | | | | /----- Rsa1.0_03102.1_g00002.1 (10) | | | /----------------100----------------+ | | | | \----- Rsa1.0_02758.1_g00002.1 (85) | | | | | | | | /---------- Rsa1.0_00769.1_g00002.1 (28) | |-91-+ | | | | | | /-78-+ /----- Rsa1.0_00134.1_g00010.1 (35) | | | | | \-100+ | | | | /-100+ \----- Rsa1.0_07319.1_g00001.1 (114) | | | | | | | | | | /-100+ \--------------- Rsa1.0_01854.1_g00005.1 (90) | | | | | | | | \-97-+ | \-------------------- Rsa1.0_00887.1_g00007.1 (91) | | | /-99-+ | | | | | /----- Rsa1.0_37341.1_g00001.1 (46) | | | | \--------100--------+ | | | | \----- Rsa1.0_00072.1_g00017.1 (78) | | | /--99-+ | | | | | /----- Rsa1.0_00095.1_g00006.1 (40) | | | | | /-100+ | /-62-+ | | | | \----- Rsa1.0_00095.1_g00022.1 (82) | | | | | \--------100--------+ | | | \-56-+ | /----- Rsa1.0_00362.1_g00007.1 (64) | | | | \-100+ | | | | \----- Rsa1.0_00818.1_g00004.1 (100) | | | | | | | \------------------------------------ Rsa1.0_11288.1_g00002.1 (150) | | | | | | /---------- Rsa1.0_00087.1_g00110.1 (14) | | | | | | |-------------------99-------------------+ /----- Rsa1.0_05374.1_g00001.1 (20) | | | \-97-+ | | | \----- Rsa1.0_00041.1_g00013.1 (36) | | | | | | /----- Rsa1.0_02405.1_g00007.1 (29) | | |---------------------100---------------------+ | | | \----- Rsa1.0_02405.1_g00006.1 (63) | | | | | | /----- Rsa1.0_00607.1_g00004.1 (30) | | |----------------------91---------------------+ | | | \----- Rsa1.0_00160.1_g00025.1 (80) | | | | | | /--------------- Rsa1.0_06027.1_g00002.1 (31) | | | | | | |----------------100----------------+ /---------- Rsa1.0_00139.1_g00034.1 (68) | | | | | | | | \-100+ /----- Rsa1.0_04034.1_g00004.1 (92) | | | \-78-+ | | | \----- Rsa1.0_00060.1_g00025.1 (93) | | | | | | /----- Rsa1.0_00111.1_g00068.1 (170) | | \---------------------100---------------------+ | | \----- Rsa1.0_13506.1_g00002.1 (115) | | | | /----- Rsa1.0_01533.1_g00002.1 (3) | | /---100---+ | | | \----- Rsa1.0_00433.1_g00001.1 (140) | | | | | | /----- Rsa1.0_03097.1_g00002.1 (11) | | | /-100+ | | | | \----- Rsa1.0_00896.1_g00015.1 (62) | | |-100+ | | | \---------- Rsa1.0_00420.1_g00007.1 (25) | | /------------58-----------+ | | | | /----- Rsa1.0_00293.1_g00003.1 (34) + | | | /-100+ | | | | | \----- Rsa1.0_00293.1_g00005.1 (42) | | | |-98-+ | | | | \---------- Rsa1.0_00044.1_g00049.1 (76) | | | | | | | | /----- Rsa1.0_00044.1_g00052.1 (75) | | | \---100---+ | | | \----- Rsa1.0_02169.1_g00002.1 (86) | | | | | | /----- Rsa1.0_01426.1_g00007.1 (6) | | | /--------------100-------------+ | | | | \----- Rsa1.0_00317.1_g00004.1 (16) | | /-100+ | | | | | | /----- Rsa1.0_23673.1_g00001.1 (8) | | | | | /------86------+ | | | | | | \----- Rsa1.0_13724.1_g00003.1 (23) | | | | | | | | | | | | /----- Rsa1.0_16113.1_g00002.1 (12) | | | | | | | | | | | | | |----- Rsa1.0_11408.1_g00001.1 (13) | | | | | | /----67---+ | | | | | | | |----- Rsa1.0_23278.1_g00001.1 (51) | | | | | | | | | | | | | | | \----- Rsa1.0_13724.1_g00002.1 (113) | | | | | |-97-+ | | | | | | | /----- Rsa1.0_12282.1_g00001.1 (44) | | | \-87-+ | | /-100+ | | | | | | | \----- Rsa1.0_03526.1_g00003.1 (190) | | | | /-100+ \-92-+ | | | | | | \---------- Rsa1.0_18257.1_g00002.1 (74) | /-95-+ | | | | | | | | | | |-------------------- Rsa1.0_10498.1_g00001.1 (18) | | | /-84-+ | | | | | | | | | | | /----- Rsa1.0_22149.1_g00001.1 (38) | | | | | | | |------66------+ | | | | | | | | \----- Rsa1.0_24109.1_g00001.1 (96) | | | | | | | | | | | | | | /-100+ |-------------------- Rsa1.0_11422.1_g00002.1 (47) | | | | | | | | | | | | | | | | | | /---------- Rsa1.0_13392.1_g00001.1 (61) | | | | | | | | | | | | | | | | | | \----66---+ /----- Rsa1.0_07715.1_g00002.1 (73) | | | | | \-100-+ | \-100+ | | | | | | | \----- Rsa1.0_07715.1_g00001.1 (130) | | | | | | | | | | | | | \------------------------- Rsa1.0_00694.1_g00006.1 (48) | | | | | | | | | | | \------------------------------ Rsa1.0_00420.1_g00008.1 (98) | | | | | | | | | | /----- Rsa1.0_01654.1_g00004.1 (57) | | | | | /-100+ | | | | | | \----- Rsa1.0_01943.1_g00008.1 (120) | | | | \-----------------95----------------+ | | | | \---------- Rsa1.0_01440.1_g00008.1 (110) | | | | | | | | /---------- Rsa1.0_00079.1_g00026.1 (17) | | | | | | | | | /-100+ /----- Rsa1.0_05509.1_g00003.1 (79) | | | | | \-85-+ | | | | /-86-+ \----- Rsa1.0_00181.1_g00021.1 (95) | | | | | | | | | | /-100+ \--------------- Rsa1.0_03662.1_g00003.1 (111) | | | | | | | | | | | \-------------------- Rsa1.0_00089.1_g00022.1 (58) | | | | | | | |-91-+ | /----- Rsa1.0_07424.1_g00001.1 (19) | | | | | /-98-+ | | | | /------100------+ | \----- Rsa1.0_09034.1_g00001.1 (67) | | | | | | /-59-+ | | | | | | | \---------- Rsa1.0_01844.1_g00002.1 (39) | | | | | | /-59-+ | | | | | | | \--------------- Rsa1.0_03276.1_g00003.1 (45) | | | | | | | | | | | | \-100+-------------------- Rsa1.0_04196.1_g00001.1 (24) | | | | | | | | | | | \-------------------- Rsa1.0_35331.1_g00001.1 (94) | | | | | | | | | | /------------------------- Rsa1.0_01989.1_g00006.1 (21) | | | | | | | | | |---100---+ | /----- Rsa1.0_04489.1_g00005.1 (32) | | | | | | /-84-+ | | | | | | | \----- Rsa1.0_08500.1_g00001.1 (60) | | | | | /-100+ /-78-+ | | | | | | | | \---------- Rsa1.0_00802.1_g00014.1 (112) | | | | | | | /-76-+ | | | | | | | | \--------------- Rsa1.0_03930.1_g00002.1 (56) \-100+ | | | /--99-+ \-59-+ | | | | | | \-------------------- Rsa1.0_00516.1_g00016.1 (110) | | | | | | | | | | | \------------------------------ Rsa1.0_00073.1_g00025.1 (83) | | | \-100+ | | | | /----- Rsa1.0_03316.1_g00003.1 (52) | | | | /-76-+ | | | | | \----- Rsa1.0_00279.1_g00020.1 (87) | | | \-----------100-----------+ | | | \---------- Rsa1.0_07073.1_g00002.1 (97) | | | | | | /----- Rsa1.0_00233.1_g00006.1 (50) | | \---------------------100---------------------+ | | \----- Rsa1.0_01744.1_g00001.1 (53) | | | | /----- Rsa1.0_01360.1_g00011.1 (72) | | /-100+ | | | \----- Rsa1.0_00038.1_g00008.1 (88) | \---------------------100---------------------+ | | /----- Rsa1.0_00015.1_g00081.1 (89) | \-100+ | \----- Rsa1.0_02019.1_g00002.1 (99) | | /---------- Rsa1.0_07505.1_g00001.1 (4) | | | /-99-+ /----- Rsa1.0_02433.1_g00012.1 (77) | | \-99-+ | /-100+ \----- Rsa1.0_05241.1_g00003.1 (160) | | | |-------------------63-------------------+ \--------------- Rsa1.0_04195.1_g00003.1 (43) | | | \-------------------- Rsa1.0_00248.1_g00021.1 (27) | | /----- Rsa1.0_36951.1_g00001.1 (22) | /-59-+ | | \----- Rsa1.0_19534.1_g00001.1 (26) |------------------------100-----------------------+ | \---------- Rsa1.0_26510.1_g00001.1 (84) | | /----- Rsa1.0_00073.1_g00002.1 (33) | /-92-+ | | \----- Rsa1.0_02553.1_g00002.1 (59) |------------------------100-----------------------+ | \---------- Rsa1.0_00022.1_g00002.1 (71) | | /----- Rsa1.0_00826.1_g00011.1 (41) | /-93-+ | | \----- Rsa1.0_02554.1_g00004.1 (81) |------------------------77------------------------+ | \---------- Rsa1.0_23774.1_g00001.1 (69) | | /----- Rsa1.0_18284.1_g00001.1 (54) |---------------------------89--------------------------+ | \----- Rsa1.0_00040.1_g00037.1 (55) | \------------------------------------------------------------- Rsa1.0_05340.1_g00003.1 (180) |