PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for
Castanea mollissima
FAR1 Family
Phylogenetic tree for domain ? help Back to Top

      /------------------------------------------------------------------- maker-scaffold06380-augustus-gene-0.8-mRNA-1/104-178         (1)
      |                                                                               
      |------------------------------------------------------------------- maker-scaffold01061-snap-gene-0.34-mRNA-1/62-136             (44)
      |                                                                               
      |       /----------------------------------------------------------- maker-scaffold03390-snap-gene-0.30-mRNA-1/85-143             (2)
      |       |                                                                       
      |       |                                 /------------------------- maker-scaffold24012-snap-gene-0.1-mRNA-1/68-144              (3)
      |       |                                 |                                     
      |       |                                 |                /-------- maker-scaffold13668-snap-gene-0.6-mRNA-1/60-124              (9)
      |       |                                 |       /---68---+                    
      |       |                         /--100--+       |        \-------- maker-scaffold02967-snap-gene-0.23-mRNA-1/26-77              (32)
      |       |                         |       |---63--+                             
      |       |                         |       |       \----------------- maker-scaffold03291-snap-gene-0.20-mRNA-1/81-133             (67)
      |       |                         |       |                                     
      |       |                         |       \------------------------- maker-scaffold03837-snap-gene-0.21-mRNA-1/68-154             (38)
      |       |------------76-----------+                                             
      |       |                         |                        /-------- maker-scaffold11982-snap-gene-0.6-mRNA-1/101-185             (5)
      |       |                         |               /---97---+                    
      |       |                         |               |        \-------- maker-scaffold15989-augustus-gene-0.9-mRNA-1/60-143          (61)
      |       |                         \-------99------+                             
      |       |                                         |        /-------- maker-scaffold01721-snap-gene-0.25-mRNA-1/59-143             (15)
      |       |                                         \---95---+                    
      |       |                                                  \-------- maker-scaffold07778-snap-gene-0.20-mRNA-1/89-171             (60)
      |       |                                                                       
      |       |                                                  /-------- maker-scaffold10008-snap-gene-0.10-mRNA-1/27-100             (4)
      |       |                                 /-------100------+                    
      |       |                                 |                \-------- maker-scaffold00090-snap-gene-1.53-mRNA-1/27-96              (18)
      |       |                                 |                                     
      |       |                                 |                /-------- maker-scaffold01269-snap-gene-0.46-mRNA-1/39-125             (11)
      |       |                                 |       /---77---+                    
      |       |                         /---98--+       |        \-------- maker-scaffold11611-snap-gene-0.9-mRNA-1/27-90               (36)
      |       |                         |       |       |                             
      |       |                         |       |       |        /-------- maker-scaffold09963-snap-gene-0.13-mRNA-1/39-125             (19)
      |       |                         |       |       |---90---+                    
      |       |                         |       |       |        \-------- maker-scaffold02580-snap-gene-0.30-mRNA-1/41-127             (23)
      |       |                         |       \--100--+                             
      +       |                         |               |        /-------- maker-scaffold04964-snap-gene-0.11-mRNA-1/48-134             (20)
      |       |                         |               |---87---+                    
      |       |                         |               |        \-------- maker-scaffold16277-snap-gene-0.2-mRNA-1/39-125              (55)
      |       |                         |               |                             
      |       |                         |               \----------------- maker-scaffold25755-snap-gene-0.0-mRNA-1/39-125              (48)
      |       |                         |                                             
      |       |                         |               /----------------- maker-scaffold00625-snap-gene-0.46-mRNA-1/12-84              (7)
      |       |                         |               |                             
      |       |                         |               |        /-------- maker-scaffold01488-snap-gene-0.43-mRNA-1/64-103             (12)
      |       |                         |               |---99---+                    
      |       |                         |               |        \-------- maker-scaffold15409-snap-gene-0.2-mRNA-1/11-96               (54)
      |       |                         |               |                             
      |       |                         |               |----------------- maker-scaffold08966-snap-gene-0.12-mRNA-1/32-72              (16)
      |       |                         |       /---84--+                             
      |       |                         |       |       |----------------- maker-scaffold04145-snap-gene-0.9-mRNA-1/61-110              (28)
      |       |------------91-----------+       |       |                             
      |       |                         |       |       |        /-------- maker-scaffold00469-snap-gene-0.42-mRNA-1/126-210            (30)
      |       |                         |       |       |---78---+                    
      |       |                         |---95--+       |        \-------- maker-scaffold00506-snap-gene-0.29-mRNA-1/40-122             (46)
      |       |                         |       |       |                             
      |       |                         |       |       \----------------- maker-scaffold03734-snap-gene-0.30-mRNA-1/8-46               (34)
      |       |                         |       |                                     
      |       |                         |       \------------------------- maker-scaffold01582-snap-gene-0.43-mRNA-1/48-86              (21)
      |       |                         |                                             
      |       |                         |                        /-------- maker-scaffold05977-snap-gene-0.21-mRNA-1/56-91              (22)
      |       |                         |               /---51---+                    
      |       |                         |               |        \-------- maker-scaffold06042-snap-gene-0.11-mRNA-1/31-116             (41)
      |       |                         |       /---83--+                             
      |       |                         |       |       \----------------- maker-scaffold04666-snap-gene-0.8-mRNA-1/21-105              (57)
      |       |                         |       |                                     
      |       |                         |---93--+                /-------- maker-scaffold01502-snap-gene-0.37-mRNA-1/20-60              (66)
      |       |                         |       |       /---62---+                    
      |       |                         |       |       |        \-------- maker-scaffold16046-snap-gene-0.1-mRNA-1/50-125              (68)
      |       |                         |       \---96--+                             
      |       |                         |               \----------------- maker-scaffold05870-snap-gene-0.15-mRNA-1/29-114             (71)
      |       |                         |                                             
      \---97--+                         \--------------------------------- maker-scaffold09962-snap-gene-0.16-mRNA-1/51-86              (31)
              |                                                                       
              |                                                  /-------- maker-scaffold16569-snap-gene-0.4-mRNA-1/69-155              (6)
              |------------------------100-----------------------+                    
              |                                                  \-------- maker-scaffold00580-snap-gene-0.34-mRNA-1/18-89              (64)
              |                                                                       
              |                                         /----------------- maker-scaffold00160-snap-gene-1.16-mRNA-1/82-138             (8)
              |                                         |                             
              |                                 /---83--+        /-------- maker-scaffold14328-snap-gene-0.0-mRNA-1/3-40                (56)
              |                                 |       \---96---+                    
              |                         /--100--+                \-------- maker-scaffold01044-snap-gene-0.26-mRNA-1/58-131             (62)
              |                         |       |                                     
              |                         |       \------------------------- maker-scaffold00403-snap-gene-0.30-mRNA-1/35-90              (43)
              |                /---77---+                                             
              |                |        |                        /-------- augustus_masked-scaffold00096-abinit-gene-1.0-mRNA-1/2-43    (26)
              |                |        \-----------98-----------+                    
              |        /---90--+                                 \-------- maker-scaffold01299-snap-gene-0.24-mRNA-1/62-155             (58)
              |        |       |                                                      
              |        |       |                                 /-------- maker-scaffold00020-augustus-gene-1.52-mRNA-1/72-163         (39)
              |        |       \---------------100---------------+                    
              |        |                                         \-------- maker-scaffold01972-augustus-gene-0.27-mRNA-1/68-159         (42)
              |---55---+                                                              
              |        |                                         /-------- maker-scaffold14382-augustus-gene-0.8-mRNA-1/60-146          (13)
              |        |--------------------99-------------------+                    
              |        |                                         \-------- maker-scaffold01051-snap-gene-0.46-mRNA-1/70-129             (69)
              |        |                                                              
              |        \-------------------------------------------------- augustus_masked-scaffold07930-abinit-gene-0.1-mRNA-1/163-233 (17)
              |                                                                       
              |                                                  /-------- maker-scaffold00029-augustus-gene-0.34-mRNA-1/66-152         (10)
              |                                 /-------72-------+                    
              |                                 |                \-------- maker-scaffold08668-snap-gene-0.14-mRNA-1/72-180             (52)
              |                                 |                                     
              |---------------100---------------+                /-------- maker-scaffold00029-snap-gene-0.40-mRNA-1/64-151             (27)
              |                                 |       /---98---+                    
              |                                 |       |        \-------- maker-scaffold00029-augustus-gene-1.37-mRNA-2/89-191         (51)
              |                                 \---55--+                             
              |                                         \----------------- maker-scaffold12279-snap-gene-0.4-mRNA-1/54-139              (40)
              |                                                                       
              |                                                  /-------- maker-scaffold09066-snap-gene-0.12-mRNA-1/44-121             (14)
              |                                         /---99---+                    
              |                                         |        \-------- maker-scaffold02284-snap-gene-0.34-mRNA-1/71-159             (70)
              |                                 /---99--+                             
              |                                 |       |        /-------- augustus_masked-scaffold01133-abinit-gene-0.3-mRNA-1/3-74    (24)
              |                                 |       \---95---+                    
              |                         /---91--+                \-------- snap_masked-scaffold04457-abinit-gene-0.10-mRNA-1/12-100     (45)
              |                         |       |                                     
              |                         |       \------------------------- maker-scaffold01133-snap-gene-0.29-mRNA-1/18-105             (65)
              |------------97-----------+                                             
              |                         |                        /-------- maker-scaffold00365-snap-gene-0.42-mRNA-1/103-190            (33)
              |                         \-----------100----------+                    
              |                                                  \-------- maker-scaffold01639-snap-gene-0.21-mRNA-1/94-183             (59)
              |                                                                       
              |----------------------------------------------------------- maker-scaffold02961-snap-gene-0.25-mRNA-1/26-67              (25)
              |                                                                       
              |                                                  /-------- maker-scaffold02284-snap-gene-0.34-mRNA-1/506-596            (29)
              |                                         /---100--+                    
              |                                         |        \-------- augustus_masked-scaffold01133-abinit-gene-0.2-mRNA-1/78-168  (53)
              |                                 /---51--+                             
              |                                 |       \----------------- maker-scaffold02284-snap-gene-0.34-mRNA-1/278-369            (50)
              |----------------99---------------+                                     
              |                                 \------------------------- maker-scaffold03433-augustus-gene-0.19-mRNA-1/82-172         (37)
              |                                                                       
              |----------------------------------------------------------- maker-scaffold00965-augustus-gene-0.44-mRNA-1/77-168         (35)
              |                                                                       
              |----------------------------------------------------------- maker-scaffold00285-augustus-gene-0.37-mRNA-1/84-171         (47)
              |                                                                       
              |                                                  /-------- maker-scaffold06874-snap-gene-0.7-mRNA-1/198-271             (49)
              \------------------------96------------------------+                    
                                                                 \-------- maker-scaffold06874-snap-gene-0.7-mRNA-1/44-118              (63)
                                                                                      

Phylogenetic tree for protein ? help Back to Top

      Subtree rooted at node 120:

                                               /-------------------------- maker-scaffold03390-snap-gene-0.30-mRNA-1            (2)
                                               |                                      
                                               |                    /----- maker-scaffold03433-augustus-gene-0.19-mRNA-1        (5)
                                               |               /-96-+                 
                                               |               |    \----- augustus_masked-scaffold01133-abinit-gene-0.2-mRNA-1 (40)
                                               |    /----93----+                      
                                               |    |          \---------- maker-scaffold02284-snap-gene-0.34-mRNA-1            (17)
                                               |    |                                 
                                               |    |          /---------- maker-scaffold01133-snap-gene-0.29-mRNA-1            (13)
                                               |    |          |                      
                                               |-89-+     /-82-+    /----- maker-scaffold00365-snap-gene-0.42-mRNA-1            (29)
                                               |    |     |    \-100+                 
                                               |    |     |         \----- maker-scaffold01639-snap-gene-0.21-mRNA-1            (51)
                                               |    |     |                           
                                          /-80-+    \--88-+         /----- augustus_masked-scaffold01133-abinit-gene-0.3-mRNA-1 (24)
                                          |    |          |    /-76-+                 
                                          |    |          |    |    \----- snap_masked-scaffold04457-abinit-gene-0.10-mRNA-1    (48)
                                          |    |          \-100+                      
                                          |    |               \---------- maker-scaffold09066-snap-gene-0.12-mRNA-1            (41)
                                          |    |                                      
                                          |    |                    /----- maker-scaffold06380-augustus-gene-0.8-mRNA-1         (28)
                                          |    |               /-100+                 
                                          |    |               |    \----- maker-scaffold01061-snap-gene-0.34-mRNA-1            (34)
                                          |    |-------72------+                      
                                          |    |               |    /----- maker-scaffold00285-augustus-gene-0.37-mRNA-1        (42)
                                     /-96-+    |               \-100+                 
                                     |    |    |                    \----- maker-scaffold00965-augustus-gene-0.44-mRNA-1        (62)
                                     |    |    |                                      
                                     |    |    \-------------------------- maker-scaffold06874-snap-gene-0.7-mRNA-1             (56)
                                     |    |                                           
                                     |    |                         /----- maker-scaffold03291-snap-gene-0.20-mRNA-1            (3)
                                     |    |                         |                 
                                     |    |                    /-92-+----- maker-scaffold13668-snap-gene-0.6-mRNA-1             (27)
                                     |    |                    |    |                 
                                     |    |                    |    \----- maker-scaffold02967-snap-gene-0.23-mRNA-1            (46)
                                     |    \---------100--------+                      
                                     |                         |    /----- maker-scaffold03837-snap-gene-0.21-mRNA-1            (12)
                                     |                         \-57-+                 
                                     |                              \----- maker-scaffold24012-snap-gene-0.1-mRNA-1             (57)
                                /-64-+                                                
                                |    |                              /----- maker-scaffold00029-augustus-gene-1.37-mRNA-2        (14)
                                |    |                         /-100+                 
                                |    |                         |    \----- maker-scaffold00029-snap-gene-0.40-mRNA-1            (67)
                                |    |                    /-80-+                      
                                |    |                    |    \---------- maker-scaffold08668-snap-gene-0.14-mRNA-1            (31)
                                |    |              /-100-+                           
                                |    |              |     \--------------- maker-scaffold00029-augustus-gene-0.34-mRNA-1        (36)
                                |    |         /-100+                                 
                                |    |         |    \--------------------- maker-scaffold12279-snap-gene-0.4-mRNA-1             (58)
                                |    |         |                                      
                                |    |         |                    /----- maker-scaffold01721-snap-gene-0.25-mRNA-1            (20)
                                |    |         |               /-98-+                 
                                |    \----75---+               |    \----- maker-scaffold07778-snap-gene-0.20-mRNA-1            (53)
                                |              |          /-100+                      
                                |              |          |    |    /----- maker-scaffold15989-augustus-gene-0.9-mRNA-1         (21)
                                |              |          |    \-100+                 
                                |              \----70----+         \----- maker-scaffold11982-snap-gene-0.6-mRNA-1             (47)
                           /-100+                         |                           
                           |    |                         |         /----- maker-scaffold14382-augustus-gene-0.8-mRNA-1         (25)
                           |    |                         \----97---+                 
                           |    |                                   \----- maker-scaffold01051-snap-gene-0.46-mRNA-1            (63)
                           |    |                                                     
                           |    |                              /---------- augustus_masked-scaffold07930-abinit-gene-0.1-mRNA-1 (4)
                           |    |                              |                      
                           |    |--------------80--------------+    /----- maker-scaffold16569-snap-gene-0.4-mRNA-1             (7)
                           |    |                              \-100+                 
                           |    |                                   \----- maker-scaffold00580-snap-gene-0.34-mRNA-1            (18)
                           |    |                                                     
                           |    |                                   /----- augustus_masked-scaffold00096-abinit-gene-1.0-mRNA-1 (16)
                           |    |                              /-100+                 
                           |    |                              |    \----- maker-scaffold01299-snap-gene-0.24-mRNA-1            (39)
                     /-100-+    |                   /----100---+                      
                     |     |    |                   |          |    /----- maker-scaffold01972-augustus-gene-0.27-mRNA-1        (44)
                     |     |    |                   |          \-100+                 
                     |     |    |                   |               \----- maker-scaffold00020-augustus-gene-1.52-mRNA-1        (55)
                     |     |    \--------100--------+                                 
                     |     |                        |     /--------------- maker-scaffold00403-snap-gene-0.30-mRNA-1            (32)
                     |     |                        |     |                           
                     |     |                        \--99-+    /---------- maker-scaffold14328-snap-gene-0.0-mRNA-1             (38)
                     |     |                              |    |                      
                     |     |                              \-84-+    /----- maker-scaffold00160-snap-gene-1.16-mRNA-1            (59)
                     |     |                                   \-64-+                 
                     |     |                                        \----- maker-scaffold01044-snap-gene-0.26-mRNA-1            (64)
                     |     |                                                          
                     |     \---------------------------------------------- maker-scaffold02961-snap-gene-0.25-mRNA-1            (65)
                /-56-+                                                                
                |    |                                    /--------------- maker-scaffold00625-snap-gene-0.46-mRNA-1            (6)
                |    |                                    |                           
                |    |                                    |         /----- maker-scaffold04145-snap-gene-0.9-mRNA-1             (9)
                |    |                                    |    /-99-+                 
                |    |                                    |    |    \----- maker-scaffold08966-snap-gene-0.12-mRNA-1            (43)
                |    |                                    |    |                      
                |    |                                    |    |    /----- maker-scaffold00469-snap-gene-0.42-mRNA-1            (11)
                |    |                                    |-100+-98-+                 
                |    |                              /-100-+    |    \----- maker-scaffold03734-snap-gene-0.30-mRNA-1            (61)
                |    |                              |     |    |                      
                |    |                              |     |    \---------- maker-scaffold00506-snap-gene-0.29-mRNA-1            (66)
                |    |                              |     |                           
                |    |                              |     |         /----- maker-scaffold01488-snap-gene-0.43-mRNA-1            (23)
                |    \--------------100-------------+     |----50---+                 
           /-100+                                   |     |         \----- maker-scaffold01582-snap-gene-0.43-mRNA-1            (54)
           |    |                                   |     |                           
           |    |                                   |     \--------------- maker-scaffold15409-snap-gene-0.2-mRNA-1             (50)
           |    |                                   |                                 
           |    |                                   \--------------------- maker-scaffold09962-snap-gene-0.16-mRNA-1            (49)
           |    |                                                                     
           |    |                                         /--------------- maker-scaffold04666-snap-gene-0.8-mRNA-1             (19)
           |    |                                         |                           
           |    |                                         |         /----- maker-scaffold01502-snap-gene-0.37-mRNA-1            (30)
           |    |                                   /--77-+    /-78-+                 
      --90-+    |                                   |     |    |    \----- maker-scaffold16046-snap-gene-0.1-mRNA-1             (35)
           |    |                                   |     \-78-+                      
           |    |                              /-78-+          \---------- maker-scaffold05977-snap-gene-0.21-mRNA-1            (68)
           |    |                              |    |                                 
           |    \--------------100-------------+    \--------------------- maker-scaffold06042-snap-gene-0.11-mRNA-1            (45)
           |                                   |                                      
           |                                   \-------------------------- maker-scaffold05870-snap-gene-0.15-mRNA-1            (60)
           |                                                                          
           |                                                        /----- maker-scaffold00090-snap-gene-1.53-mRNA-1            (10)
           \---------------------------100--------------------------+                 
                                                                    \----- maker-scaffold10008-snap-gene-0.10-mRNA-1            (37)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- maker-scaffold04964-snap-gene-0.11-mRNA-1            (1)
      |                                                                               
      |------------------------------------------------------------------- maker-scaffold16277-snap-gene-0.2-mRNA-1             (15)
      |                                                                               
      |                                            /---------------------- (120)
      +                     /----------53----------+                                  
      |                     |                      \---------------------- maker-scaffold11611-snap-gene-0.9-mRNA-1             (26)
      |                     |                                                         
      |                     |--------------------------------------------- maker-scaffold25755-snap-gene-0.0-mRNA-1             (8)
      |                     |                                                         
      \---------100---------+--------------------------------------------- maker-scaffold01269-snap-gene-0.46-mRNA-1            (22)
                            |                                                         
                            |--------------------------------------------- maker-scaffold02580-snap-gene-0.30-mRNA-1            (33)
                            |                                                         
                            \--------------------------------------------- maker-scaffold09963-snap-gene-0.13-mRNA-1            (52)