PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM1057
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 150: /----- Csa02g012740.1 [Camelina sativa] (2) /-82-+ | \----- Csa00511s240.1 [Camelina sativa] (29) /-100+ | \---------- Csa13g052170.1 [Camelina sativa] (150) /-99-+ | | /----- Cagra.4137s0022.1.p [Capsella grandiflora] (27) | \---100---+ /-98-+ \----- Carubv10000703m [Capsella rubella] (90) | | | \-------------------- Bostr.25463s0011.1.p [Boechera stricta] (53) /------100------+ | | /----- 327396 [Arabidopsis lyrata] (61) | \--------100--------+ | \----- AT4G04450.1 [Arabidopsis thaliana] (88) | | /----- GSBRNA2T00151581001 [Brassica napus] (5) | /-100+ | | \----- XP_009134300.1 [Brassica rapa] (19) | /-88-+ | | \---------- XP_013623496.1 [Brassica oleracea] (44) | /-100+ | | \--------------- GSBRNA2T00015633001 [Brassica napus] (51) | /-100+ /-96-+ | | /----- RrC7066_p1 [Raphanus raphanistrum] (43) | | | \------100-----+ | | /-99-+ \----- Rsa1.0_00316.1_g00001.1 [Raphanus sativus] (100) | | | | | | | \------------------------- Tp6g04460 [Thellungiella parvula] (55) | | | | | | /----- GSBRNA2T00094513001 [Brassica napus] (17) | | /-100-+ /-90-+ | | | | | \----- XP_009114575.1 [Brassica rapa] (81) /-100+ | | | /-100+ | | | | | | | /----- GSBRNA2T00157805001 [Brassica napus] (39) | | | | | | \-100+ | | \-100+ \------100-----+ \----- XP_013609954.1 [Brassica oleracea] (54) | | | | | | | \--------------- 676759030 [Sisymbrium irio] (89) /-100+ | | | | | \------------------------------------ Thhalv10028586m [Eutrema salsugineum] (99) | | | | | \---------------------------------------------- KFK30968.1 [Arabis alpina] (67) /-57-+ | | | \--------------------------------------------------- AA6G00277 [Aethionema arabicum] (20) | | | | /----- XP_010538731.1 [Tarenaya hassleriana] (36) | \------------------------100-----------------------+ | \----- XP_010529450.1 [Tarenaya hassleriana] (40) | | /----- XP_013621892.1 [Brassica oleracea] (7) | /-100+ | | \----- GSBRNA2T00138277001 [Brassica napus] (63) | /-100+ | | | /----- XP_009135540.1 [Brassica rapa] (37) | | \-100+ | /-100+ \----- GSBRNA2T00105168001 [Brassica napus] (59) | | | | | | /----- Rsa1.0_01730.1_g00003.1 [Raphanus sativus] (32) | /-99-+ \---100---+ | | | \----- RrC13123_p1 [Raphanus raphanistrum] (62) | | | --100+ /-100+ \-------------------- 676710984 [Sisymbrium irio] (75) | | | | /-100-+ \------------------------- Tp7g20220 [Thellungiella parvula] (31) | | | | | \------------------------------ Thhalv10026864m [Eutrema salsugineum] (66) | | | | /----- Araha.8266s0004.1.p [Arabidopsis halleri] (14) | | /-100+ | | | \----- 329411 [Arabidopsis lyrata] (69) | | /------100-----+ | | | \---------- AT4G22070.1 [Arabidopsis thaliana] (52) | /-99-+ | | | | | /----- Csa11g024150.1 [Camelina sativa] (28) | | | | /-100+ | | | | | \----- Csa12g034930.1 [Camelina sativa] (35) | | | /-100+ /-99-+ | | | | | | \---------- Csa10g021170.1 [Camelina sativa] (82) | | | | | /-100+ | | | | | | | /----- Carubv10004543m [Capsella rubella] (34) \---------84--------+ | | | | \----99---+ | \--77-+ \-100+ \----- Cagra.22019s0001.1.p [Capsella grandiflora] (83) | | | | | \-------------------- Bostr.10089s0026.1.p [Boechera stricta] (50) | | | \------------------------------ KFK29599.1 [Arabis alpina] (93) | \----------------------------------------- AA57G00405 [Aethionema arabicum] (97) Subtree rooted at node 176: /-------------------------------------------------------- (150) | | /----- XP_009113093.1 [Brassica rapa] (3) | /-100+ | | \----- GSBRNA2T00070609001 [Brassica napus] (49) | /-100+ | | | /----- GSBRNA2T00009169001 [Brassica napus] (42) | | \-100+ | /---100---+ \----- XP_013606301.1 [Brassica oleracea] (140) | | | | | | /----- Rsa1.0_00172.1_g00016.1 [Raphanus sativus] (71) | | \---100---+ | | \----- RrC1582_p1 [Raphanus raphanistrum] (94) | /-100+ | | | /-------------------- Tp2g02330 [Thellungiella parvula] (70) | | | | | | | | /----- GSBRNA2T00000453001 [Brassica napus] (77) | | | | /-100+ | | \-70-+ | \----- XP_013634064.1 [Brassica oleracea] (84) | /--78-+ | /-100+ | | | | | \---------- GSBRNA2T00028662001 [Brassica napus] (78) | | | \-100+ | | | \--------------- 676767316 [Sisymbrium irio] (110) | | | /-85-+ | \------------------------------ Thhalv10023390m [Eutrema salsugineum] (41) | | | | | | /----- Csa09g096910.1 [Camelina sativa] (4) | | | | | | | /-100+----- Csa16g055030.1 [Camelina sativa] (74) | | /-81-+ | | | | | | | \----- Csa07g063560.1 [Camelina sativa] (120) | | | | /-82-+ | | | | | | /----- Carubv10020051m [Capsella rubella] (24) | | | | | \-100+ | | | | /-96-+ \----- Cagra.0077s0017.1.p [Capsella grandiflora] (60) | | | | | | | | | | | \--------------- Bostr.22157s0126.1.p [Boechera stricta] (16) | | /-100+ | | | | | | \-------95------+ /----- AT1G62300.1 [Arabidopsis thaliana] (21) --85-+ | | | | /-90-+ | | | | | | \----- 475116 [Arabidopsis lyrata] (80) | | | | \---100---+ | | | | \---------- Araha.36995s0001.1.p [Arabidopsis halleri] (48) | | /-100+ | | | | | \----------------------------------------- KFK40614.1 [Arabis alpina] (45) | | | | | | | | /----- XP_010533798.1 [Tarenaya hassleriana] (38) | | | | /-66-+ | \-78-+ | | \----- XP_010553450.1 [Tarenaya hassleriana] (86) | | \----------------100----------------+ | | \---------- XP_010546656.1 [Tarenaya hassleriana] (98) | | | \--------------------------------------------------- Eucgr.F00740.1.p [Eucalyptus grandis] (47) | \------------------------------------------------------------- evm.model.supercontig_152.36 [Carica papaya] (130) Root part of tree: /------------------------------------------------------------------ Gorai.007G171900.1 [Gossypium raimondii] (1) | |------------------------------------------------------------------ Gh_D11G1584 [Gossypium hirsutum] (160) | | /------------------------------------ (176) | | | | /--------------- Thecc1EG030268t1 [Theobroma cacao] (6) | | | | | | /----- Gorai.009G180400.1 [Gossypium raimondii] (9) | | /----95---+ /-100+ | | | | | \----- Gh_D05G1645 [Gossypium hirsutum] (23) | | | \-100+ | | | | /----- Cotton_A_04667_BGI-A2_v1.0 [Gossypium arboreum] (12) | | | \-100+ | | | \----- Gh_A05G1472 [Gossypium hirsutum] (91) | | | | | | /----- Gorai.010G182500.1 [Gossypium raimondii] (22) | /-100+ /-100+ /-100+ | | | | | | \----- Gh_D06G1651 [Gossypium hirsutum] (25) | | | | | /---100---+ | | | | | | | /----- Gh_A06G1322 [Gossypium hirsutum] (79) | | | | | | \-100+ | | | | | | \----- Cotton_A_29468_BGI-A2_v1.0 [Gossypium arboreum] (96) | | | | | | | | | | \-53-+ /----- Gh_D10G0117 [Gossypium hirsutum] (26) | | | | | /-100+ | | | | | | \----- Gorai.011G012700.1 [Gossypium raimondii] (64) | | | | | /-100+ | | | | | | \---------- Gh_A10G0113 [Gossypium hirsutum] (30) | | \--67-+ \-100+ | | | \--------------- Cotton_A_08460_BGI-A2_v1.0 [Gossypium arboreum] (73) | | | | | | /----- orange1.1g007099m [Citrus sinensis] (11) + /-100+ | /-100+ | | | | | \----- Ciclev10014642m [Citrus clementina] (58) | | | |--------100--------+ | | | | | /----- Neem_26983_f_1 [Azadirachta indica] (72) | | | | \-100+ | | | | \----- Neem_1498_f_1 [Azadirachta indica] (85) | | | | | | | | /----- Eucgr.E04011.1.p [Eucalyptus grandis] (33) | | | \-----------100----------+ | | | \----- EcC044311.10 [Eucalyptus camaldulensis] (56) | | | | | | /----- EcC053897.10 [Eucalyptus camaldulensis] (8) | /-100+ | /---100---+ | | | | | \----- Eucgr.K00786.1.p [Eucalyptus grandis] (18) | | | | | | | | \------------88-----------+ /----- Neem_320_f_10 [Azadirachta indica] (10) | | | | /-100+ | | | | | \----- Neem_20658_f_1 [Azadirachta indica] (68) | | | \-100+ | | | | /----- orange1.1g007546m [Citrus sinensis] (65) | | | \-100+ | | | \----- Ciclev10014665m [Citrus clementina] (87) | /-100+ | | | | \---------------------------------------------- evm.model.supercontig_87.103 [Carica papaya] (57) | | | | | | /----- Gorai.001G214800.1 [Gossypium raimondii] (15) | | | /-100+ | | | | \----- Gh_D07G1877 [Gossypium hirsutum] (95) | | | /-100+ | /-100+ | | | /----- Cotton_A_18714_BGI-A2_v1.0 [Gossypium arboreum] (92) | | | | | \-100+ | | | \-----------------98----------------+ \----- Gh_A07G1665 [Gossypium hirsutum] (170) | | | | \-100+ | \--------------- Thecc1EG002087t1 [Theobroma cacao] (76) | | | \-------------------------------------------------------- Cotton_A_12289_BGI-A2_v1.0 [Gossypium arboreum] (13) | \------------------------------------------------------------- Gh_A11G1432 [Gossypium hirsutum] (46) |