PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A11G1432
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family WRKY
Protein Properties Length: 517aa    MW: 55769.9 Da    PI: 5.0786
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A11G1432genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.31e-30248306259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  Gh_A11G1432 248 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 306
                  7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.9E-34232308IPR003657WRKY domain
SuperFamilySSF1182907.06E-28240308IPR003657WRKY domain
PROSITE profilePS5081129.838242308IPR003657WRKY domain
SMARTSM007741.0E-36247307IPR003657WRKY domain
PfamPF031069.5E-27249306IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    Send to blast
MDFFAQRSNK LVDDIDDEEV EEEDDDDDDD DGNLIHTSDS DIKDSADRTK LQLNVNTGLN  60
LLTTNTSSDI SNDGIHCNTE DKRAKDEVAV LQAEVERMNT ENQRLREMLS QVTSNYNTVQ  120
MHLVTLMQQP PDAKAEEQDQ IKQIKKSNGG LMVPSPRQFM DLRLPAVDID EPSLSSSDHS  180
GSDLASKGFG LRKRDSSEDS PDQGSQGQGW VANKVPRFNS SKNVDQTEAT MRKARVSVRA  240
RSEATMITDG CQWRKYGQKM AKGNPCPRAY YRCTMAAGCP VRKQVQRCAE DRTILITTYE  300
GNHNHPLPPA AMAMASTTSS AARMLLSGSM SSADGLMNSN VLTRTILPCS SSMATISASA  360
PFPTVTLDLT QTPNPFQSPR LTPGRFQVPF PNPPQNLANS PAAALLPQIF GQALHTQSKF  420
SGLQMSGVVG HQQLQISLAE TVNAATAAIA ADPNFTAALA AAITSIIGSS QPNNAAIPND  480
NAATANLTSV TNSRANNATT TSNSNNKITN NSSFTAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-23234310176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016678924.10.0PREDICTED: probable WRKY transcription factor 31
SwissprotQ9XEC31e-130WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A1U8ISM90.0A0A1U8ISM9_GOSHI; probable WRKY transcription factor 31
STRINGGorai.007G171900.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM105728107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.13e-96WRKY family protein