PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC044311.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 416aa MW: 45680.2 Da PI: 8.8617 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.3 | 2.1e-30 | 232 | 290 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed ++++tYeg+Hnh+ EcC044311.10 232 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRGILITTYEGNHNHP 290 7*********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.9E-33 | 216 | 292 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 8.76E-28 | 224 | 292 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.402 | 226 | 292 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.7E-36 | 231 | 291 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.8E-26 | 233 | 290 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 416 aa Download sequence Send to blast |
IFFLQQLQHL NVELQRMNSE NQRLKEMLSQ VTSNYNALQL HLSSLLQQQH QHHIQHQHQS 60 NGAEPAQDHE VSFSSCERSS LRNEKKKVFM GLNRSDASRP ELQNAMKKNQ TVVPRQFLDL 120 GPMSVAAVET DEISNSSSEE RTRDGSRSPL TKMEVASSAH NNKAEQDSSG ARDGDKRGVR 180 NESPDDSETQ GWGPNKAAKL EAARTSIEQS AEATMRKARV SVRARSEAPM ITDGCQWRKY 240 GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRGILI TTYEGNHNHP LPPAAMAMAS 300 TTAAAVSMLL SGSMSSADGI MNPNLLARAI LPCSSSMATI SASAPFPTVT LDLTHSPNPL 360 QIQRPQPQFQ VPFPGQPQNF GSLPSQSLPP AFGQALYNQS KFSGLQLSQD LANSSQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 5e-22 | 218 | 294 | 1 | 76 | WRKY transcription factor 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010057907.1 | 0.0 | PREDICTED: probable WRKY transcription factor 31 isoform X1 | ||||
Swissprot | Q9XEC3 | 1e-119 | WRK42_ARATH; WRKY transcription factor 42 | ||||
TrEMBL | A0A059CAH4 | 0.0 | A0A059CAH4_EUCGR; Uncharacterized protein | ||||
STRING | XP_010057907.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1057 | 28 | 107 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 1e-105 | WRKY family protein |