PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E04011.1.p | ||||||||
Common Name | EUGRSUZ_E04011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 606aa MW: 64390 Da PI: 7.0608 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.5 | 3.6e-30 | 314 | 372 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed ++++tYeg+Hnh+ Eucgr.E04011.1.p 314 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRGILITTYEGNHNHP 372 7*********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 5.2E-33 | 298 | 374 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.57E-27 | 306 | 374 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.402 | 308 | 374 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.7E-36 | 313 | 373 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.8E-26 | 315 | 372 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 606 aa Download sequence Send to blast |
MFPGIDFSAS LGRRDDHRHA SILNSSSPAA DEGRVVVGEV DFFSDCKSRS SLPAAAAGGE 60 EGRAATVSVK RESPVASGPA RSELNVNTGL RLLTANTGSD QSTVDDGFSS DIEEKRAKNE 120 QLAHLNAELQ RMNSENQRLK EMLSQVTSNY NALQLHLSSL LQQQQQHHIQ HQHQSNGAEP 180 AQDHENAMKK NQTVVPRQFL DLGPMSAAAA ETDEISNSSS EERTRDGSRS PLAKMEVASS 240 AHNNKAEQDS SGARDGDKRG VRNESPDDSE TQGWGPNKAA KLEAARTSIE QSAEATMRKA 300 RVSVRARSEA PMITDGCQWR KYGQKMAKGN PCPRAYYRCT MAVGCPVRKQ VQRCAEDRGI 360 LITTYEGNHN HPLPPAAMAM ASTTAAAVSM LLSGSMSSAD GIMNPNLLAR AILPCSSSVA 420 TISASAPFPT VTLDLTHSPN PLQIQRPQPQ FQVPFPGQPQ NFGSLPSQSL PPAFGQALYN 480 QSKFSGLQLS QDLANPSQLG QQVASLPQHL QQAQQQQQQQ QQQQQQSASL ADTLSAATAA 540 ITADPNFTAA LAAAISSIIG GAHPNNSTTT TTTGTAAAAT TTGNNNNNTT NVSTSNSKMS 600 SFPGN* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 3e-22 | 300 | 376 | 1 | 76 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in the control of processes related to senescence and pathogen defense (PubMed:12000796). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:12000796). Activates the transcription of the SIRK gene and represses its own expression and that of the WRKY42 genes (PubMed:12000796). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000269|PubMed:12000796, ECO:0000269|PubMed:25733771}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E04011.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid, ethylene, jasmonic acid, pathogens, wounding and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010057907.1 | 0.0 | PREDICTED: probable WRKY transcription factor 31 isoform X1 | ||||
Swissprot | Q9C519 | 1e-152 | WRKY6_ARATH; WRKY transcription factor 6 | ||||
TrEMBL | A0A059CAH4 | 0.0 | A0A059CAH4_EUCGR; Uncharacterized protein | ||||
STRING | XP_010057907.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1057 | 28 | 107 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 1e-126 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E04011.1.p |