PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010538731.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family WRKY
Protein Properties Length: 538aa    MW: 58236.8 Da    PI: 6.9098
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010538731.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.77.4e-31289347259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  XP_010538731.1 289 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRSILITTYEGNHNHP 347
                     7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-33273349IPR003657WRKY domain
SuperFamilySSF1182905.89E-28281349IPR003657WRKY domain
PROSITE profilePS5081129.677283349IPR003657WRKY domain
SMARTSM007743.7E-37288348IPR003657WRKY domain
PfamPF031068.5E-27290347IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    Send to blast
MFQFPASLSG PHGCGDHRQG QSPPPSSEEE ADEHRRVAVG EVDFFSEKRD RVSRENIAGD  60
TDRVHVKMEI PWVEDDDRSM DVNIGLNLLT ANTGSDESTV DDGLSMDMEE KRVKSEVVQM  120
QAKLQKMSEE NQRLREMVNK ANSNYSSLQM QLVAVMRRQE HYRTSSSSQA DRCLGGEGKR  180
QERPAMVPRQ FIDLGPSSTA SEREAEVSSE ERMTVRSGSP PLHSNPRDEG KRLLGREESP  240
ESEFPNKVPK HYPSCNGNGN VIDHSATAEA TMRKARVSVR ARSEAPMISD GCQWRKYGQK  300
MAKGNPCPRA YYRCTMAVGC PVRKQVQRCA EDRSILITTY EGNHNHPLPP AAMPMASTTT  360
AAASMLLSGS MSSTQEGIMN PTNLLARTIL PACSSTMATI SASAPFPTIT LDLTTNSSNA  420
NANASNPLLQ FAHCPGFSAA AFNPSILPHV VSQASYYNNN HQSKFSGLQL PAQSLPTALA  480
AESVSATPAA IAADPNFAAA VAAAITSIIN GSGHHQNNSS SNNNNNNTVT TSNGGTRQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-22275351176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010538731.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010538731.10.0PREDICTED: probable WRKY transcription factor 31
SwissprotQ9XEC30.0WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A3P6FUH10.0A0A3P6FUH1_BRAOL; Uncharacterized protein
STRINGXP_010538731.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM105728107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22070.11e-175WRKY DNA-binding protein 31