PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT4G22070.1
Common NameATWRKY31, F1N20.170, WRKY31
Organism
Arabidopsis thaliana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family WRKY
Protein Properties Length: 538aa    MW: 58540.9 Da    PI: 5.9409
Description WRKY DNA-binding protein 31
Gene Model
Gene Model ID Type Source Coding Sequence
AT4G22070.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.87.1e-31297355259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  AT4G22070.1 297 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAgGCPVRKQVQRCAEDRSILITTYEGNHNHP 355
                  7****************************9****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.9E-34281357IPR003657WRKY domain
SuperFamilySSF1182907.19E-28289357IPR003657WRKY domain
PROSITE profilePS5081129.918291357IPR003657WRKY domain
SMARTSM007741.5E-36296356IPR003657WRKY domain
PfamPF031067.3E-27298355IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000084anatomyplant sperm cell
PO:0009005anatomyroot
PO:0009032anatomypetal
PO:0009046anatomyflower
PO:0025022anatomycollective leaf structure
PO:0007611developmental stagepetal differentiation and expansion stage
PO:0007616developmental stageflowering stage
Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    Send to blast
MFRFPVSLGG SRDEDRHDQI TPLDDHRVVV DEVDFFSEKR DRVSRENIND DDDEGNKVLI  60
KMEGSRVEEN DRSRDVNIGL NLLTANTGSD ESTVDDGLSM DMEDKRAKIE NAQLQEELKK  120
MKIENQRLRD MLSQATTNFN ALQMQLVAVM RQQEQRNSSQ DHLLAQESKA EGRKRQELQI  180
MVPRQFMDLG PSSGAAEHGA EVSSEERTTV RSGSPPSLLE SSNPRENGKR LLGREESSEE  240
SESNAWGNPN KVPKHNPSSS NSNGNRNGNV IDQSAAEATM RKARVSVRAR SEAAMISDGC  300
QWRKYGQKMA KGNPCPRAYY RCTMAGGCPV RKQVQRCAED RSILITTYEG NHNHPLPPAA  360
TAMASTTTAA ASMLLSGSMS SQDGLMNPTN LLARAILPCS SSMATISASA PFPTITLDLT  420
NSPNGNNPNM TTNNPLMQFA QRPGFNPAVL PQVVGQAMYN NQQQSKFSGL QLPAQPLQIA  480
ATSSVAESVS AASAAIASDP NFAAALAAAI TSIMNGSSHQ NNNTNNNNVA TSNNDSRQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-23283359176WRKY transcription factor 1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO1865122580.0
Genevisible254347_at0.0
Expression AtlasAT4G22070-
AtGenExpressAT4G22070-
ATTED-IIAT4G22070-
Functional Description ? help Back to Top
Source Description
TAIRmember of WRKY Transcription Factor; Group II-b
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00447DAP27203113Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT4G22070.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT4G22070
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY0526480.0AY052648.1 Arabidopsis thaliana WRKY transcription factor 31 (WRKY31) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001328880.10.0WRKY DNA-binding protein 31
RefseqNP_001328881.10.0WRKY DNA-binding protein 31
RefseqNP_001328882.10.0WRKY DNA-binding protein 31
RefseqNP_567644.10.0WRKY DNA-binding protein 31
SwissprotQ93WT00.0WRK31_ARATH; Probable WRKY transcription factor 31
TrEMBLA0A178UV250.0A0A178UV25_ARATH; WRKY31
STRINGAT4G22070.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM105728107
Representative plantOGRP1417875
Publications ? help Back to Top
  1. Eulgem T,Rushton PJ,Robatzek S,Somssich IE
    The WRKY superfamily of plant transcription factors.
    Trends Plant Sci., 2000. 5(5): p. 199-206
    [PMID:10785665]
  2. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  3. Hampton CR, et al.
    Cesium toxicity in Arabidopsis.
    Plant Physiol., 2004. 136(3): p. 3824-37
    [PMID:15489280]
  4. Manzano C,Abraham Z,L
    Identification of ubiquitinated proteins in Arabidopsis.
    Plant Mol. Biol., 2008. 68(1-2): p. 145-58
    [PMID:18535787]
  5. Kamata N,Komeda Y
    An inversion identified in acl1-1 mutant functions as an enhancer of the acl1-1 phenotype.
    Genes Genet. Syst., 2008. 83(4): p. 293-300
    [PMID:18931455]
  6. Efroni I, et al.
    Regulation of leaf maturation by chromatin-mediated modulation of cytokinin responses.
    Dev. Cell, 2013. 24(4): p. 438-45
    [PMID:23449474]