PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC053897.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 491aa    MW: 52264.3 Da    PI: 7.0549
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC053897.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.49.5e-31220278259
                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+
  EcC053897.10 220 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRSVLITTYEGNHNHP 278
                   7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-33204280IPR003657WRKY domain
SuperFamilySSF1182907.45E-28212280IPR003657WRKY domain
PROSITE profilePS5081129.815214280IPR003657WRKY domain
SMARTSM007743.7E-37219279IPR003657WRKY domain
PfamPF031065.1E-27221278IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    Send to blast
MAKGGGLSID DPDPTGLNLL TTNTSSDQSM VDDGISPNSE DKRAKNELAV LQAEVERMSN  60
ENQRLKDMLS QVTTNYSALQ MHLLAVMQDQ KPENSSDENR KSDEKKENSM LMVPRQFMDL  120
GLATANNSDS PSSSEGGTRD RTGSPVNNNR EPAEVGMGLD PDKKESACGR HKREESPDQE  180
SLPIKVPRSI SPSKSVDQTD ATMRKARVSV RAHSEAPMIT DGCQWRKYGQ KMAKGNPCPR  240
AYYRCTMAAG CPVRKQVQRC AEDRSVLITT YEGNHNHPLP PAAMAMASTT SSAARMLLSG  300
SMPSGEGLMN TNFLTRTLLP CSSSMATISA SAPFPTVTLD LTQNPNTLQS QASPGQFQVP  360
FPNPGSSLPN HSAALLPQIF GQALYNQSKF SGLQMSQDAK ACRLEGQPQL PQPPGQGQPN  420
SIFTTDTLSA ATAAIATNPN FTAALAAAIS SIMGGSNPSG SSGMSSLVPS GANNRSNSSS  480
NNCSNDNKIS S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-22206282176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00428DAPTransfer from AT4G04450Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010035553.10.0PREDICTED: probable WRKY transcription factor 31
SwissprotQ9XEC31e-135WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A058ZZL70.0A0A058ZZL7_EUCGR; Uncharacterized protein
STRINGXP_010035553.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM105728107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-116WRKY family protein