PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP1885
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Subtree rooted at node 163: /----- Pavir.1NG274100.1.p [Panicum virgatum] (2) /-99-+ | \----- Pavir.1KG305800.1.p [Panicum virgatum] (60) /-99-+ | \---------- Pahal.A01926.1 [Panicum hallii] (12) | /--99-+ /---------- Do025245.1 [Dichanthelium oligosanthes] (59) | | | | \-100+ /----- Sevir.1G177600.1.p [Setaria viridis] (77) | \-100+ /-97-+ \----- Seita.1G174700.1.p [Setaria italica] (86) | | | | /----- Sobic.004G159500.1.p [Sorghum bicolor] (24) | \------100------+ | \----- GRMZM2G047999_P01 [Zea mays] (43) | | /--------------- Zpz_sc00888.1.g00090.1.sm.mk [Zoysia pacifica] (5) /-80-+ | | | /-100-+ /---------- Zmw_sc00059.1.g00720.1 [Zoysia matrella] (39) | | | | | | | | \-67-+ /----- Zjn_sc00017.1.g04580.1.am.mk [Zoysia japonica] (81) | | | \-86-+ | | | \----- Zpz_sc00584.1.g00160.1.am.mk [Zoysia pacifica] (92) | | | | \-82-+ /----- Zjn_sc00020.1.g02440.1.am.mk [Zoysia japonica] (61) | | /-92-+ /-56-+ | | \----- Zmw_sc02043.1.g00060.1 [Zoysia matrella] (90) | | | /-82-+ | | | | | /----- Zpz_sc00560.1.g00200.1.am.mk [Zoysia pacifica] (83) | | | | \-99-+ | | \--82-+ \----- Zmw_sc03259.1.g00070.1 [Zoysia matrella] (84) | | | | | \--------------- Zpz_sc08342.1.g00010.1.am.mk [Zoysia pacifica] (97) | | | | /----- Bradi3g44470.1.p [Brachypodium distachyon] (36) | \-----------100-----------+ | \----- Brast04G186900.1.p [Brachypodium stacei] (41) /-84-+ | | /--------------------- OB02G26200.1 [Oryza brachyantha] (26) | | | | | | /--------------- OMERI04G06880.1 [Oryza meridionalis] (27) | | /-75-+ | | | | | | /----- ORUFI02G19410.1 [Oryza rufipogon] (29) | | | | | /-100+ | | | \-100-+ | \----- LOC_Os02g32040.1 [Oryza sativa japonica] (85) | | | | | | | | | |---------- ORGLA02G0159100.1 [Oryza glaberrima] (33) | | | | | | \----79---+ \-99-+---------- ONIVA02G20420.1 [Oryza nivara] (49) | | | | | |---------- BGIOSGA006366-PA [Oryza sativa indica] (79) | | | | | \---------- OGLUM02G18720.1 [Oryza glumaepatula] (96) | | | \-------------------------- LPERR02G14670.1 [Leersia perrieri] (95) | |----------------------------------------- GRMZM2G060876_P01 [Zea mays] (3) | | /----- GSMUA_Achr10P17370_001 [Musa acuminata] (6) |-----------------61----------------+ | \----- GSMUA_Achr3P02360_001 [Musa acuminata] (25) | | /----- Zmw_sc01211.1.g00050.1 [Zoysia matrella] (7) | /-100+ | | \----- Zjn_sc00006.1.g04640.1.am.mk [Zoysia japonica] (14) | /-100+ | | \---------- Zmw_sc00032.1.g00140.1 [Zoysia matrella] (11) | /-100-+ | | \--------------- Zpz_sc00241.1.g00320.1.sm.mk [Zoysia pacifica] (18) | | |--------100--------+ /----- Zpz_sc01236.1.g00050.1.sm.mk [Zoysia pacifica] (55) | | /-100+ | | | \----- Zmw_sc00335.1.g00140.1 [Zoysia matrella] (73) | \----100---+ | \---------- Zjn_sc00090.1.g00150.1.am.mk [Zoysia japonica] (78) | |----------------------------------------- PEQU_25843 [Phalaenopsis equestris] (8) | |----------------------------------------- Zosma63g00340.1 [Zostera marina] (9) | | /----- Traes_2BL_5DC21F3CD.1 [Triticum aestivum] (10) | | | /-100+----- Traes_2BL_970693C1F.1 [Triticum aestivum] (15) | | | | | \----- Traes_2BL_E7871AFBA.1 [Triticum aestivum] (75) | /-100+ | | | /----- Traes_2AL_F24D031AA.1 [Triticum aestivum] (76) | | \-100+ | /-100-+ \----- TRIUR3_35273-P1 [Triticum urartu] (87) | | | | | \--------------- MLOC_73522.1 [Hordeum vulgare] (65) |--------100--------+ /-84-+ | /----- Brast09G065300.1.p [Brachypodium stacei] (23) | | \------100------+ | | \----- Bradi5g08471.1.p [Brachypodium distachyon] (30) | | | | /--------------------- BGIOSGA016321-PA [Oryza sativa indica] (13) | | | | | | /----- ORUFI04G12370.1 [Oryza rufipogon] (17) | | | /-99-+ | | /-100+ | \----- LOC_Os04g32790.1 [Oryza sativa japonica] (91) | | | | /-65-+ | | | | | \---------- ONIVA04G09120.1 [Oryza nivara] (63) | | | \--83-+ | | | | /----- OMERI04G09670.1 [Oryza meridionalis] (47) | | /-50-+ \---100---+ | | | | \----- OGLUM04G10880.1 [Oryza glumaepatula] (94) | | | | | | | |-------------------------- OPUNC04G09190.1 [Oryza punctata] (51) | |----79---+ | | | | \-------------------------- LPERR04G07940.1 [Leersia perrieri] (70) | | | | | \------------------------------- OB04G18290.1 [Oryza brachyantha] (37) | | | | /---------- Sobic.006G059800.1.p [Sorghum bicolor] (21) | | | | | /----82----+ /----- GRMZM2G079825_P01 [Zea mays] (68) | | | \-88-+ | | | \----- GRMZM2G023708_P01 [Zea mays] (69) | | | /-100-+ | | /----- Sevir.7G088600.1.p [Setaria viridis] (34) | | |---------66--------+ /-100+ | | | | | \----- Seita.7G081300.1.p [Setaria italica] (50) | | | | /-64-+ | | | | | \---------- Do004879.1 [Dichanthelium oligosanthes] (88) | | | | | | | | \--85-+ /----- Pavir.7NG148900.1.p [Panicum virgatum] (48) | | | | /-100+ | | | | | \----- Pavir.J169400.1.p [Panicum virgatum] (67) | | | \-99-+ | | | \---------- Pahal.G00808.1 [Panicum hallii] (54) | | | | | |----------------------------------------- Zosma124g00230.1 [Zostera marina] (42) | | | | | |----------------------------------------- PEQU_01824 [Phalaenopsis equestris] (45) | | | | | |----------------------------------------- Aco017794.1 [Ananas comosus] (46) | | | | | | /----- XP_010929553.1 [Elaeis guineensis] (62) | | |----------------100----------------+ | | | \----- XP_010909908.1 [Elaeis guineensis] (66) | | | | | |----------------------------------------- Spipo7G0068000 [Spirodela polyrhiza] (71) /-99-+ | | | | | |----------------------------------------- Aco016197.1 [Ananas comosus] (74) | | | | | | | \----------------------------------------- 462947140 [Eragrostis tef] (89) | | | | | \---------------------------------------------- PEQU_03244 [Phalaenopsis equestris] (52) | | | | /----- XP_010937339.1 [Elaeis guineensis] (4) | | /-100+ | | | \----- PDK_30s727901g001 [Phoenix dactylifera] (64) | | /-79-+ | | | \---------- GSMUA_Achr7P17910_001 [Musa acuminata] (40) | | /--98-+ | | | \--------------- GSMUA_Achr6P35320_001 [Musa acuminata] (56) | |--------------100-------------+ | | \--------------------- Aco001157.1 [Ananas comosus] (58) | | | | /--------------- LPERR08G04370.1 [Leersia perrieri] (19) /-53-+ | | | | | | /---------- OB08G14600.1 [Oryza brachyantha] (20) | | | | | | | | | | /----- BGIOSGA027571-PA [Oryza sativa indica] (22) | | \-----------------95-----------------+ | | | | | | |----- ONIVA08G04340.1 [Oryza nivara] (38) | | | |-81-+ | | | | |----- ORUFI08G04980.1 [Oryza rufipogon] (72) | | \-60-+ | | | | \----- LOC_Os08g07700.1 [Oryza sativa japonica] (80) | | | --100+ | |---------- OPUNC08G04370.1 [Oryza punctata] (31) | | | | | | /----- ORGLA08G0039300.1 [Oryza glaberrima] (44) | | \-100+ | | \----- OGLUM08G04690.1 [Oryza glumaepatula] (93) | | | | /----- Sobic.007G058300.1.p [Sorghum bicolor] (32) | \------------------------100------------------------+ | \----- GRMZM2G055070_P01 [Zea mays] (57) | \-------------------------------------------------------------- 462928709 [Eragrostis tef] (35) Root part of tree: /------------------------------------------------------------------- Pavir.J600300.1.p [Panicum virgatum] (1) | |------------------------------------------------------------------- Pahal.F01139.1 [Panicum hallii] (16) | + /---------------------- (163) | /----------100---------+ | | \---------------------- Do011293.1 [Dichanthelium oligosanthes] (82) \---------100---------+ | /---------------------- Sevir.6G043500.1.p [Setaria viridis] (28) \----------100---------+ \---------------------- Seita.6G046300.1.p [Setaria italica] (53) |