PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_03244 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | ERF | ||||||||
Protein Properties | Length: 281aa MW: 31303.9 Da PI: 5.0112 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.4 | 3.1e-17 | 59 | 107 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +gr++AeIrdp + + r++lg+f+ta+eAa a+++a+ +l+g PEQU_03244 59 FLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAFEAALAYDKAAISLKG 107 56******.**********843...4************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 2.3E-30 | 58 | 121 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.033 | 58 | 115 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.06E-27 | 58 | 114 | No hit | No description |
SuperFamily | SSF54171 | 7.19E-19 | 59 | 115 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.7E-27 | 59 | 114 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.5E-7 | 59 | 70 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.3E-10 | 61 | 107 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.5E-7 | 81 | 97 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence Send to blast |
MFFNSQTLKR RTQQPSEQTL APTQNGIPLL NHPYIHHISS NLPTTEKRGR RRITEPGRFL 60 GVRRRPWGRY AAEIRDPATK ERHWLGTFDT AFEAALAYDK AAISLKGAQA RTNFIYPELS 120 SISSFPLSSN QTLTLASSST SSPNLTSPHP LPLPLPSNQT SDDFPCEFEF YGDTKSGDLS 180 SIVTESSLRC ATSKSCGLNT EVLDFSPPSE VVPSDDFSRV VSKVEEGNHD LGCLMEEPLW 240 ELSPSQTAMN GQVRAGSEAA LMENWCWTDD VFDYDYCPLF L |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 4e-18 | 49 | 114 | 5 | 71 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020572617.1 | 0.0 | ethylene-responsive transcription factor ESR2-like | ||||
TrEMBL | A0A2I0VJW7 | 1e-124 | A0A2I0VJW7_9ASPA; Ethylene-responsive transcription factor ERF086 | ||||
STRING | XP_008802124.1 | 6e-43 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1885 | 33 | 97 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18560.1 | 6e-38 | ERF family protein |