PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00032.1.g00140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 257aa MW: 27060.4 Da PI: 4.345 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.8 | 1.3e-18 | 33 | 84 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++y GVr+++ +gr++AeIrdp + + r++lg+f+taeeAa a+++a+++l+g+ Zmw_sc00032.1.g00140.1.am.mk 33 TRYLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAEEAAVAYDRAARSLRGA 84 5799******.**********843...4*************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.26E-29 | 33 | 92 | No hit | No description |
Pfam | PF00847 | 8.8E-11 | 34 | 83 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.562 | 34 | 91 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.2E-32 | 34 | 97 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.73E-21 | 34 | 91 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 8.4E-29 | 34 | 91 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-8 | 35 | 46 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-8 | 57 | 73 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MMNFSSYFSS SSSSDKKSSS SRRGQQPDTT NTTRYLGVRR RPWGRYAAEI RDPATKERHW 60 LGTFDTAEEA AVAYDRAARS LRGARARTNF AYPDLPLGSS VTPYLSPDLT SGDNSAQLLQ 120 PFYAADPAAA LANPAANGAA VKDDYDYGYS DADMNSLMDD IAIPDDLSAM GGDCGGAMMD 180 MSSMYGTGAA NAGAGGGWCD ASEFGGYGAG ASTTAPGAHG MYFEEGHVHS PLFSPMPAVD 240 DACADGFQLG GSSSYYY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 4e-18 | 35 | 90 | 6 | 62 | ATERF1 |
3gcc_A | 4e-18 | 35 | 90 | 6 | 62 | ATERF1 |
5wx9_A | 4e-18 | 34 | 101 | 14 | 81 | Ethylene-responsive transcription factor ERF096 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001152173.1 | 1e-104 | AP2 domain containing protein | ||||
TrEMBL | A0A3L6Q9Q7 | 1e-102 | A0A3L6Q9Q7_PANMI; Ethylene-responsive transcription factor LEP-like | ||||
TrEMBL | B6UA41 | 1e-102 | B6UA41_MAIZE; AP2 domain containing protein | ||||
STRING | Pavir.Gb01913.1.p | 1e-112 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1885 | 33 | 97 |