PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP1453
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Subtree rooted at node 189: /----- PDK_30s745071g005 [Phoenix dactylifera] (3) /-100+ | \----- XP_010925507.1 [Elaeis guineensis] (4) /-84-+ | \---------- PDK_30s663981g010 [Phoenix dactylifera] (88) /----64---+ | \--------------- Aco015181.1 [Ananas comosus] (18) | | /----- GSMUA_Achr7P09510_001 [Musa acuminata] (12) | /-100+ /-51-+ | \----- GSMUA_AchrUn_randomP28610_001 [Musa acuminata] (180) | | /-91-+ | | | \---------- GSMUA_Achr6P05480_001 [Musa acuminata] (96) | | /-80-+ | | | \--------------- GSMUA_Achr4P30940_001 [Musa acuminata] (130) | \-74-+ | \-------------------- GSMUA_Achr2P16590_001 [Musa acuminata] (80) | /------------84-----------+ /----- Zosma13g00110.1 [Zostera marina] (16) | |-----------57-----------+ | | \----- Spipo0G0178900 [Spirodela polyrhiza] (78) | | | | /----- PEQU_21110 [Phalaenopsis equestris] (74) | | /-52-+ | | | \----- PEQU_18789 [Phalaenopsis equestris] (114) | \---------53--------+ | \---------- Spipo21G0033300 [Spirodela polyrhiza] (98) | | /---------- 462859892 [Eragrostis tef] (5) | | | /----98---+ /----- 462859722 [Eragrostis tef] (24) | | \-96-+ | | \----- 462859904 [Eragrostis tef] (53) | | | | /----- Zpz_sc01216.1.g00070.1.sm.mk [Zoysia pacifica] (6) | | /-59-+ | /----98---+ | \----- Zmw_sc03738.1.g00030.1 [Zoysia matrella] (51) | | | /-100+ | | | | | /----- Zmw_sc01518.1.g00090.1 [Zoysia matrella] (27) | | | | \-75-+ | | | | \----- Zjn_sc00008.1.g07180.1.am.mk [Zoysia japonica] (100) | | \-83-+ | | | /----- Zjn_sc00069.1.g03350.1.sm.mk [Zoysia japonica] (28) | | | | | | \---100---+----- Zpz_sc00062.1.g00510.1.am.mk [Zoysia pacifica] (60) | | | | | \----- Zmw_sc05316.1.g00060.1 [Zoysia matrella] (66) | | | /-------98------+ /---------- Pahal.D02567.1 [Panicum hallii] (9) | | | | | | | /-100+ /----- Pavir.4KG270300.1.p [Panicum virgatum] (77) | | | | \-100+ | | | | \----- Pavir.4NG062800.1.p [Panicum virgatum] (89) /-99-+ | | /-100+ | | | | | | /----- Seita.4G240200.1.p [Setaria italica] (31) | | | | | \---100---+ | | | | /-100+ \----- Sevir.4G252600.1.p [Setaria viridis] (110) | | | | | | | | | | | \-------------------- Do009902.1 [Dichanthelium oligosanthes] (62) | | | \-100+ | | | | /----- GRMZM2G115721_P01 [Zea mays] (33) | | | \--------100--------+ | | | \----- Sobic.010G168500.2.p [Sorghum bicolor] (120) | | | | | | /-------------------- OMERI06G18870.1 [Oryza meridionalis] (14) | | | | | | | | /----- BGIOSGA021039-PA [Oryza sativa indica] (36) | | | | /---100---+ | | | /-76-+ | \----- LOC_Os06g36480.1 [Oryza sativa japonica] (150) | | /-97-+ | | | | | | | | | | /----- ORUFI06G19520.1 [Oryza rufipogon] (85) | | | | | \-100+ | | | | | | | /-100+----- ONIVA06G22200.1 [Oryza nivara] (87) | | | | | | | | | | | | /-57-+ | | \----- OGLUM06G19630.1 [Oryza glumaepatula] (160) | | | | | | \-100+ | | | | | | | /----- ORGLA06G0153500.1 [Oryza glaberrima] (91) | | | | | | \-100+ | | | | /-100-+ | \----- OBART06G18520.1 [Oryza barthii] (94) | | | | | | | | | | | | | \------------------------- KN538782.1_FGP005 [Oryza longistaminata] (26) | | | | | | | | | | /-100+ \------------------------------ OPUNC06G16740.1 [Oryza punctata] (113) | | | | | | | | | | | | /----- OB06G26080.1 [Oryza brachyantha] (46) | | | | | \--------------52--------------+ | | | | | \----- LPERR06G15260.1 [Leersia perrieri] (99) | \-96-+ | | | | | | /---------- MLOC_72553.1 [Hordeum vulgare] (40) | | | | | --99-+ | \-85-+ /-91-+ /----- Traes_7AL_EFD897AFC.2 [Triticum aestivum] (52) | | | | \-79-+ | | | /-100+ \----- Traes_7DL_1913741A8.1 [Triticum aestivum] (110) | | | | | | | | | \--------------- TRIUR3_32198-P1 [Triticum urartu] (75) | | | /-95-+ | | | | | /----- Brast07G145000.1.p [Brachypodium stacei] (79) | | | | \------100-----+ | | \-------89------+ \----- Bradi1g37898.1.p [Brachypodium distachyon] (90) | | | | | | /----- PH01004129G0090 [Phyllostachys heterocycla] (45) | | \---------99--------+ | | \----- PH01004273G0140 [Phyllostachys heterocycla] (95) | | | \--------------------------------------------------- Zosma11g00600.1 [Zostera marina] (8) | | /------------------------------ PH01000491G0390 [Phyllostachys heterocycla] (7) | | | | /---------- TRIUR3_33147-P1 [Triticum urartu] (10) | | | | | /-100+ /----- Traes_3AL_41AC2099E1.2 [Triticum aestivum] (41) | | | \-89-+ | /----89----+ /-85-+ \----- Traes_3AL_41AC2099E.2 [Triticum aestivum] (97) | | | | | | | | /-100+ \--------------- MLOC_66537.1 [Hordeum vulgare] (39) | | | | | | | | | \-------------------- Traes_3DL_C686CE2E3.2 [Triticum aestivum] (21) | | \-100+ | | | /----- Brast08G178700.1.p [Brachypodium stacei] (13) | | \--------100--------+ | | \----- Bradi2g33307.2.p [Brachypodium distachyon] (70) | | | | /----- Sobic.009G071600.2.p [Sorghum bicolor] (15) | | /-----------100----------+ | | | \----- Sobic.009G071500.1.p [Sorghum bicolor] (38) | | | \--------100--------+ | /----- Sevir.3G113300.1.p [Setaria viridis] (25) | | /------100-----+ | | | \----- Seita.3G111000.1.p [Setaria italica] (37) | /-100-+ | | | | | /---------- Pahal.C01598.1 [Panicum hallii] (34) | | | /-100+ | | | | | | /-99-+ /----- Pavir.3KG188900.1.p [Panicum virgatum] (69) | | | | | | \-92-+ | | | | \-100+ \----- Pavir.3KG194800.1.p [Panicum virgatum] (115) | | \-100+ | | | | \--------------- Pavir.J149600.1.p [Panicum virgatum] (111) | | | | | \------------------------- Do016642.1 [Dichanthelium oligosanthes] (50) \-100+ | /----- Zmw_sc00748.1.g00050.1 [Zoysia matrella] (35) | /-56-+ | | \----- Zpz_sc00228.1.g00080.1.sm.mkhc [Zoysia pacifica] (48) | /-100+ | | | /----- Zmw_sc00471.1.g00160.1 [Zoysia matrella] (61) | | \-100+ | /-100+ \----- Zjn_sc00024.1.g02770.1.am.mkhc [Zoysia japonica] (84) | | | | | \--------------- Oropetium_20150105_03172A [Oropetium thomaeum] (54) \------100------+ | /----- 462895220 [Eragrostis tef] (64) \------100-----+ \----- 462849400 [Eragrostis tef] (190) Subtree rooted at node 217: /----- (189) /----------------------70---------------------+ | \----- PH01000358G0570 [Phyllostachys heterocycla] (55) | | /-------------------- BGIOSGA002220-PA [Oryza sativa indica] (11) | | | | /----- KN538755.1_FGP008 [Oryza longistaminata] (17) | | /-100+ | | | \----- OGLUM01G06390.1 [Oryza glumaepatula] (56) | /-100+ /-100+ | | | | \---------- ORUFI01G06380.1 [Oryza rufipogon] (92) | | |-100+ | | | \--------------- ONIVA01G06690.2 [Oryza nivara] (82) /-58-+ | | | | /-100+ \-------------------- LOC_Os01g09550.1 [Oryza sativa japonica] (20) | | | | | | | |------------------------- OBART01G05840.2 [Oryza barthii] (73) | | /-100-+ | | | | | \------------------------- ORGLA01G0055000.1 [Oryza glaberrima] (76) | | | | | | /-80-+ \------------------------------ OPUNC01G05680.1 [Oryza punctata] (140) | | | | | | /-100+ \------------------------------------ OB01G15780.1 [Oryza brachyantha] (22) | | | | | \-83-+ \----------------------------------------- LPERR01G05530.1 [Leersia perrieri] (65) /-100+ | | | \---------------------------------------------- PH01002611G0200 [Phyllostachys heterocycla] (19) | | | | /---------- TRAES3BF096900070CFD_t1 [Triticum aestivum] (23) | | | | | | /----- EMT27068 [Aegilops tauschii] (83) | | /-100+-100+ | | | | \----- TRIUR3_31341-P1 [Triticum urartu] (170) | | | | | | /-100+ \---------- Traes_3AS_74E386CE7.1 [Triticum aestivum] (112) | | | | | | | \--------------- MLOC_75795.1 [Hordeum vulgare] (29) | \----------------100----------------+ | | /----- Brast01G355100.1.p [Brachypodium stacei] (86) | \------100-----+ | \----- Bradi2g05700.3.p [Brachypodium distachyon] (116) | --100+ /----- Zmw_sc01050.1.g00040.1 [Zoysia matrella] (32) | /-100+ | | \----- Zpz_sc01442.1.g00030.1.sm.mkhc [Zoysia pacifica] (71) | /---100---+ | | | /----- Zmw_sc00646.1.g00100.1 [Zoysia matrella] (43) | | \-100+ | | \----- Zjn_sc00011.1.g07110.1.sm.mkhc [Zoysia japonica] (49) | | | /-100+ /----- Zmw_sc00688.1.g00010.1 [Zoysia matrella] (44) | | | /-97-+ | | | | \----- Zpz_sc00468.1.g00110.1.sm.mkhc [Zoysia pacifica] (93) | | | /-100+ | | | | \---------- Zmw_sc02761.1.g00130.1 [Zoysia matrella] (67) | /-100+ \-100+ | | | \--------------- Zjn_sc00005.1.g03670.1.sm.mkhc [Zoysia japonica] (81) | | | | | | /----- 462851085 [Eragrostis tef] (58) \--------------100-------------+ \--------100--------+ | \----- 462923865 [Eragrostis tef] (59) | \------------------------------ Oropetium_20150105_07363A [Oropetium thomaeum] (57) Root part of tree: /------------------------------------------------------------------ Pavir.5NG037700.1.p [Panicum virgatum] (1) | |------------------------------------------------------------------ Pavir.5KG054400.1.p [Panicum virgatum] (2) | | /----------- (217) | /---------------97---------------+ | | \----------- Do013581.1 [Dichanthelium oligosanthes] (63) + | | | /---------------------- GRMZM2G166721_P01 [Zea mays] (30) | /----100---+ | | | | /----100---+ /----------- Sobic.003G035100.1.p [Sorghum bicolor] (47) | | | | \----100---+ | | | | \----------- GRMZM2G112681_P01 [Zea mays] (72) | | \----96----+ \----100---+ | /----------- Seita.5G135300.1.p [Setaria italica] (42) | \---------100---------+ | \----------- Sevir.5G133600.10.p [Setaria viridis] (68) | \------------------------------------------------------- Pahal.E04286.10 [Panicum hallii] (117) |