PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_32198-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 451aa    MW: 49917.7 Da    PI: 10.5173
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_32198-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.97.2e-181912257128
              NAM  57 ewyfFskrdkkyatgkrknra...............................tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkge 117
                      + +fF++ +k+y+tg+rk+r+                                ++ +W++tgk+++v + +g++ g+kk+Lv+y   g+++k+e
  TRIUR3_32198-P1  19 SRHFFHRPSKAYTTGTRKRRKiqppatvdasalssagsvaagaahqqqqqqqRSETRWHKTGKTRPVAV-GGRQRGCKKILVLYtnFGKHRKPE 111
                      679*****************88*************************9998755789************.99************5547999999 PP

              NAM 118 ktdWvmheyrl 128
                      kt+Wvmh+y+l
  TRIUR3_32198-P1 112 KTNWVMHQYHL 122
                      *********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100517.4721141IPR003441NAC domain
SuperFamilySSF1019411.26E-201640IPR003441NAC domain
PfamPF023653.9E-766122IPR003441NAC domain
SuperFamilySSF1019411.26E-2072141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MDDGATATTG GGVSKDGLSR HFFHRPSKAY TTGTRKRRKI QPPATVDASA LSSAGSVAAG  60
AAHQQQQQQQ RSETRWHKTG KTRPVAVGGR QRGCKKILVL YTNFGKHRKP EKTNWVMHQY  120
HLGESEEERE GELVVSKIFY QTQPRQCGVG DGASASVPAS STGTSAMERR RADRAGRSRA  180
VRMTPSDMVN AAFHGTTRIQ DFSFSQFRNN IEEGLTCANW MMPTPYLVTS MNLGFPYTFP  240
NNKVGMGGSD HQVVQVRADE GVLHRPAALH HQHPHQQQHH VVDEHDHRRH HHHYAGLQQE  300
HHHSSTAAFH VSTPTDPIAT LIAAPPVHQG SVVLAAPTAE PYGHGAPSYH NQEDERPHQT  360
RKFDGRSTSG LEEVIMGCTS RRKHQAARRI QNGSTHPSGL LTTRIIMGER ANTSAMHLRA  420
LAGLGEWRRN MSTQHGPDTA LLRFFQTTVI L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0037132e-76AP003713.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0528E12.
GenBankAP0149622e-76AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence.
GenBankCP0126142e-76CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020164992.11e-178uncharacterized protein LOC109750443
TrEMBLM7ZV430.0M7ZV43_TRIUA; NAC domain-containing protein 8
STRINGTRIUR3_32198-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP145338117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.17e-47NAC domain containing protein 75