PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01518.1.g00090.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 462aa MW: 50841.5 Da PI: 8.2002

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01518.1.g00090.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	100.7	2e-31	107	269	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk........leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatg 71 lp+G++F+Ptd+el+ e+L++kv+ + ++++ i+ +i++++P++Lp ++++ + ++F++ +k+y+tg Zmw_sc01518.1.g00090.1.am.mk 107 LPAGVKFDPTDQELI-EHLEAKVRPGTgaapshplIDEFIPtIEGEdGICYTHPEKLP-GLTKDGLSRHYFHRPSKAYTTG 185 799**********.99**999888886553333334776646******.455566789********* PP NAM 72 krknra..........................tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmh 124 +rk+r+ ++ +W++tgk+++v++ g++ g+kk+Lv+y g+++k++kt+Wvmh Zmw_sc01518.1.g00090.1.am.mk 186 TRKRRKiqpptaatssssspaaqhqqqqqqqkRSETRWHKTGKTRPVVV-AGHQRGCKKILVLYtnFGKHRKPQKTNWVMH 265 *88****************9998755789********.9999******5547999999*** PP NAM 125 eyrl 128 +y+l Zmw_sc01518.1.g00090.1.am.mk 266 QYHL 269 98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.31E-34	99	192	IPR003441	NAC domain
PROSITE profile	PS51005	28.059	107	288	IPR003441	NAC domain
Pfam	PF02365	7.3E-15	108	269	IPR003441	NAC domain
SuperFamily	SSF101941	1.31E-34	219	288	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence Send to blast
MFTMSTQYNL PVEQAERSLA SASRLRRVQL PYPPIHDRNP ALIRVGKGFS GNLGGEGEEL 60 EATMDGGAST AATSGGNLQE QRKYMSESSC CPRCGHKINR LLDWVGLPAG VKFDPTDQEL 120 IEHLEAKVRP GTGAAPSHPL IDEFIPTIEG EDGICYTHPE KLPGLTKDGL SRHYFHRPSK 180 AYTTGTRKRR KIQPPTAATS SSSSPAAQHQ QQQQQQKRSE TRWHKTGKTR PVVVAGHQRG 240 CKKILVLYTN FGKHRKPQKT NWVMHQYHLG EAEEEREGEL VVSKIFYQTQ PRQCGAAEPS 300 AASSAATVEM SDQAAAVPVA TSSSSAGVAF QGAVGIDEFN FAQFRSSQVQ ARDDDQEVHA 360 GQHHHLQQEH DLRHPYANQE QQRMAAAAAA AFHIRTPTDP ITALITPPPL LHHGRRPAGF 420 WTGRGDYGLH FKEGHGNGSG SKASADWQYP SFWPPDNQDH DG

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence Send to blast

MFTMSTQYNL PVEQAERSLA SASRLRRVQL PYPPIHDRNP ALIRVGKGFS GNLGGEGEEL  60
EATMDGGAST AATSGGNLQE QRKYMSESSC CPRCGHKINR LLDWVGLPAG VKFDPTDQEL  120
IEHLEAKVRP GTGAAPSHPL IDEFIPTIEG EDGICYTHPE KLPGLTKDGL SRHYFHRPSK  180
AYTTGTRKRR KIQPPTAATS SSSSPAAQHQ QQQQQQKRSE TRWHKTGKTR PVVVAGHQRG  240
CKKILVLYTN FGKHRKPQKT NWVMHQYHLG EAEEEREGEL VVSKIFYQTQ PRQCGAAEPS  300
AASSAATVEM SDQAAAVPVA TSSSSAGVAF QGAVGIDEFN FAQFRSSQVQ ARDDDQEVHA  360
GQHHHLQQEH DLRHPYANQE QQRMAAAAAA AFHIRTPTDP ITALITPPPL LHHGRRPAGF  420
WTGRGDYGLH FKEGHGNGSG SKASADWQYP SFWPPDNQDH DG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004966092.1	1e-167	uncharacterized protein LOC101753253
TrEMBL	A0A368QXL4	1e-166	A0A368QXL4_SETIT; Uncharacterized protein
STRING	Si006435m	1e-165	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1453	38	117