PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_33147-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 477aa    MW: 53996 Da    PI: 10.1986
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_33147-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM111.78.3e-35461882128
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkklelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra............t 78 
                      p+G++F+Ptd+el+ e+L+ kv ++ ++l +    +i+   +i++++P++Lp  v+ + ++ +fF++ +k+y+tg+rk+r+             
  TRIUR3_33147-P1  46 PAGVKFDPTDQELI-EHLESKVMKRAHSLIDdfipTIEGEdGICYTHPEKLP-GVTRNGQSKHFFHRPSKAYTTGTRKRRKihaetelsnsknG 137
                      89************.99*****99996654423223555545**********.555667899******************87899888886654 PP

              NAM  79 ksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      ++ +W++tgk++++++ +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  TRIUR3_33147-P1 138 AETRWHKTGKTRPLMV-GGQHKGCKKILVLYinFGKTRKAEKTNWVMHQYHL 188
                      4678************.99************766899*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.84E-3536207IPR003441NAC domain
PROSITE profilePS5100531.80445207IPR003441NAC domain
PfamPF023651.1E-1546188IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    Send to blast
MDKGHPGYSK YMIDAKLQEQ GFFASQHCAN CGHELHHKPK DMVGFPAGVK FDPTDQELIE  60
HLESKVMKRA HSLIDDFIPT IEGEDGICYT HPEKLPGVTR NGQSKHFFHR PSKAYTTGTR  120
KRRKIHAETE LSNSKNGAET RWHKTGKTRP LMVGGQHKGC KKILVLYINF GKTRKAEKTN  180
WVMHQYHLGD LEDEKEGELI VSKVFYQTQP RQTAAATTST VLREPSTNGN MEVKMPKSMK  240
IGLTDHAVAA AAAIQMQRQQ QQLLKQGDEM KKGKEGQDQL QQKFDHRPAG LEGLIMACKS  300
ASTKEVSFLI KEPRTVCESE VQDGVEDSET RTKLRGSPWC CKAKMRKSCI LVLSSAFWSG  360
RRRRLHRNLL GGVALEVHLL AVVWSSPTVM GDRRAMCFFL IRPSRSLSVY GPTAANRKDD  420
FFNELIAQKP PSELNGSPWM TSTKFTELAI RTNEVVNRTR INRFWATLTP ANSKRFF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFN5644300.0FN564430.1 Triticum aestivum chromosome 3B-specific BAC library, contig ctg0464b.
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156234.10.0NAC domain-containing protein 73-like
RefseqXP_020156242.10.0NAC domain-containing protein 73-like
TrEMBLM7Y5I10.0M7Y5I1_TRIUA; NAC domain-containing protein 8
STRINGTRIUR3_33147-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP145338117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.15e-93NAC domain containing protein 75