PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_18789

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

NAC

Protein Properties

Length: 415aa MW: 47423.7 Da PI: 8.4169

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_18789	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114	1.5e-35	23	166	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgy 82 lp+G++F+Ptd+el+ e+L++kv++++ ++++ i+ +i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r+ + + PEQU_18789 23 LPAGVKFDPTDQELI-EHLEAKVSTQSilrshplIDEFIPtIEGEdGICYTHPEKLP-GVTKDGLSKHFFHRPSKAYTTGTRKRRKiqteldvqRGETR 119 799**********.99*****77775553333333766646******.555666799**************75666554333778 PP NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l PEQU_18789 120 WHKTGKTRAVTA-NGRQKGCKKILVLYtnFGKQRKPEKTNWVMHQYHL 166 ********.999*******5547999999*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.09E-37	19	185	IPR003441	NAC domain
PROSITE profile	PS51005	32.794	23	185	IPR003441	NAC domain
Pfam	PF02365	3.1E-16	24	166	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence Send to blast
MSGSKQCPSC GHKLERKPDW VGLPAGVKFD PTDQELIEHL EAKVSTQSIL RSHPLIDEFI 60 PTIEGEDGIC YTHPEKLPGV TKDGLSKHFF HRPSKAYTTG TRKRRKIQTE LDVQRGETRW 120 HKTGKTRAVT ANGRQKGCKK ILVLYTNFGK QRKPEKTNWV MHQYHLGELE EEKEGELVVS 180 KIFYQTQPRQ CSWSSERKSF DEGIIKSTSC SYEKVLCLMI PKIHKYASMT HVSSYVICQK 240 KLNCSKKDIK SKKLQKIRSQ NFLFFFFLNE QVGIGEAAAT HSTEASMGQE EHEEHNHHQQ 300 QLHQSAAVVT TPFNITRPGN PISSIISQAT LHQNSMVLDD PYHVSTILLH DKFEHQQQHQ 360 QQQKLVERSA GAGLEELIMG CTSTDIKAEI SIAQPQETEW LKYSYWSPDS HDHHG

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence Send to blast

MSGSKQCPSC GHKLERKPDW VGLPAGVKFD PTDQELIEHL EAKVSTQSIL RSHPLIDEFI  60
PTIEGEDGIC YTHPEKLPGV TKDGLSKHFF HRPSKAYTTG TRKRRKIQTE LDVQRGETRW  120
HKTGKTRAVT ANGRQKGCKK ILVLYTNFGK QRKPEKTNWV MHQYHLGELE EEKEGELVVS  180
KIFYQTQPRQ CSWSSERKSF DEGIIKSTSC SYEKVLCLMI PKIHKYASMT HVSSYVICQK  240
KLNCSKKDIK SKKLQKIRSQ NFLFFFFLNE QVGIGEAAAT HSTEASMGQE EHEEHNHHQQ  300
QLHQSAAVVT TPFNITRPGN PISSIISQAT LHQNSMVLDD PYHVSTILLH DKFEHQQQHQ  360
QQQKLVERSA GAGLEELIMG CTSTDIKAEI SIAQPQETEW LKYSYWSPDS HDHHG

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269\|PubMed:25265867, ECO:0000269\|PubMed:25535195}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020672383.1	0.0	NAC domain-containing protein 75
Refseq	XP_020672393.1	0.0	NAC domain-containing protein 75
Swissprot	Q9M0F8	1e-118	NAC75_ARATH; NAC domain-containing protein 75
TrEMBL	A0A2I0VUI0	0.0	A0A2I0VUI0_9ASPA; NAC domain-containing protein 8
STRING	VIT_11s0016g02880.t01	1e-165	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1453	38	117

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-111	NAC domain containing protein 75

Publications ? help Back to Top
Droc G, et al. OryGenesDB: a database for rice reverse genetics. Nucleic Acids Res., 2006. 34(Database issue): p. D736-40 [PMID:16381969] Sakamoto S,Mitsuda N Reconstitution of a secondary cell wall in a secondary cell wall-deficient Arabidopsis mutant. Plant Cell Physiol., 2015. 56(2): p. 299-310 [PMID:25535195]