PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for
Trifolium pratense
M-type_MADS FamilyPhylogenetic tree for domain ? help Back to Top |
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Subtree rooted at node 129: /----- Tp57577_TGAC_v2_mRNA27961/14-63 (2) /-67-+ | \----- Tp57577_TGAC_v2_mRNA38349/15-63 (61) /-90-+ | \---------- Tp57577_TGAC_v2_mRNA9810/10-59 (78) /--93-+ | \--------------- Tp57577_TGAC_v2_mRNA30803/9-59 (74) /-63-+ | \--------------------- Tp57577_TGAC_v2_mRNA24190/9-59 (83) | | /----- Tp57577_TGAC_v2_mRNA24207/12-62 (20) | | /-70-+ /-61-+----- Tp57577_TGAC_v2_mRNA39807/9-59 (26) | | | | | | /-96-+ \----- Tp57577_TGAC_v2_mRNA15032/9-59 (43) | | | | | \----93----+ \---------- Tp57577_TGAC_v2_mRNA2039/36-86 (40) /-70-+ | | | \--------------- Tp57577_TGAC_v2_mRNA15177/9-58 (52) | | | | /----- Tp57577_TGAC_v2_mRNA4734/24-74 (4) /-71-+ \------------98-----------+ | | \----- Tp57577_TGAC_v2_mRNA17350/24-73 (80) | | /-57-+ \------------------------------------ Tp57577_TGAC_v2_mRNA41069/9-59 (73) | | | \----------------------------------------- Tp57577_TGAC_v2_mRNA26430/16-62 (29) /--72-+ | | /----- Tp57577_TGAC_v2_mRNA9557/10-53 (44) | \-------------------100------------------+ | \----- Tp57577_TGAC_v2_mRNA40586/75-119 (76) | | /----- Tp57577_TGAC_v2_mRNA32568/22-68 (3) | /-100+ | | \----- Tp57577_TGAC_v2_mRNA25233/21-67 (57) | | | /-56-+ /----- Tp57577_TGAC_v2_mRNA23761/17-64 (14) | | | | | | \-90-+----- Tp57577_TGAC_v2_mRNA3977/18-64 (68) | | | | | \----- Tp57577_TGAC_v2_mRNA3984/17-64 (82) | | | |--------------- Tp57577_TGAC_v2_mRNA35281/18-64 (7) | | | |--------------- Tp57577_TGAC_v2_mRNA21862/16-64 (8) | | | |--------------- Tp57577_TGAC_v2_mRNA11384/3-38 (11) | /--51-+ | | |--------------- Tp57577_TGAC_v2_mRNA547/16-64 (31) | | | | | |--------------- Tp57577_TGAC_v2_mRNA9359/16-64 (33) | | | | | |--------------- Tp57577_TGAC_v2_mRNA25300/16-64 (34) | | | | | |--------------- Tp57577_TGAC_v2_mRNA25304/44-91 (45) | | | | | |--------------- Tp57577_TGAC_v2_mRNA7829/40-87 (54) | | | | | \--------------- Tp57577_TGAC_v2_mRNA548/17-64 (67) |--------------68--------------+ | | /----- Tp57577_TGAC_v2_mRNA29038/16-64 (17) /-100+ | | | | | /-53-+----- Tp57577_TGAC_v2_mRNA12860/16-62 (59) | | | | | | | | /-96-+ \----- Tp57577_TGAC_v2_mRNA21561/16-64 (64) | | | | | | | |--77-+ \---------- Tp57577_TGAC_v2_mRNA12155/108-137 (72) | | | | | | | \--------------- Tp57577_TGAC_v2_mRNA16639/16-64 (48) | | | | | \--------------------- Tp57577_TGAC_v2_mRNA25310/27-73 (18) | | | |---------------------------------------------------- Tp57577_TGAC_v2_mRNA5032/12-53 (5) | | | | /--------------------- Tp57577_TGAC_v2_mRNA22346/30-65 (10) | | | | | | /----- Tp57577_TGAC_v2_mRNA32921/26-60 (21) | | | /---100---+ | |--------------100-------------+ | \----- Tp57577_TGAC_v2_mRNA29711/32-59 (62) | | | | | | | | /----- Tp57577_TGAC_v2_mRNA29403/20-65 (25) | | \--60-+ /-99-+ | | | | \----- Tp57577_TGAC_v2_mRNA36950/26-70 (36) /-68-+ | | | | | | \-100+---------- Tp57577_TGAC_v2_mRNA25139/26-67 (27) | | | | | | | \---------- Tp57577_TGAC_v2_mRNA35734/25-70 (81) | | | | | | /----- Tp57577_TGAC_v2_mRNA12316/18-65 (41) | | | /-74-+ | | | | \----- Tp57577_TGAC_v2_mRNA12286/20-65 (69) | | | | | | | |---------- Tp57577_TGAC_v2_mRNA9914/20-65 (51) | | | | | | \--------------------88-------------------+ /----- Tp57577_TGAC_v2_mRNA315/13-55 (58) | | |-100+ | | | \----- Tp57577_TGAC_v2_mRNA12311/10-55 (87) --80-+ | | | | | /----- Tp57577_TGAC_v2_mRNA12294/58-104 (85) | | \-100+ | | \----- Tp57577_TGAC_v2_mRNA12334/19-65 (86) | | | | /----- Tp57577_TGAC_v2_mRNA1462/11-51 (19) | | /-97-+ | | | \----- Tp57577_TGAC_v2_mRNA33537/11-51 (55) | \----------------------90----------------------+ | \---------- Tp57577_TGAC_v2_mRNA27308/13-51 (49) | | /--------------------- Tp57577_TGAC_v2_mRNA29943/11-54 (16) | | | | /---------- Tp57577_TGAC_v2_mRNA1915/11-54 (28) \-------------------100------------------+ | | /-100+ /----- Tp57577_TGAC_v2_mRNA1917/11-54 (53) | | \-64-+ \--66-+ \----- Tp57577_TGAC_v2_mRNA7596/11-54 (79) | \--------------- Tp57577_TGAC_v2_mRNA24508/11-59 (66) Root part of tree: /------------------------------------------------------------------- Tp57577_TGAC_v2_mRNA39141/11-52 (1) | |------------------------------------------------------------------- Tp57577_TGAC_v2_mRNA28663/11-52 (47) | | /------- Tp57577_TGAC_v2_mRNA15248/9-50 (60) |-----------------------------97----------------------------+ | \------- Tp57577_TGAC_v2_mRNA28322/53-99 (65) | | /--------------- Tp57577_TGAC_v2_mRNA24833/14-52 (6) | | | | /------- Tp57577_TGAC_v2_mRNA16407/14-52 (23) |-------------------------66------------------------+---55--+ | | \------- Tp57577_TGAC_v2_mRNA16398/182-220 (77) | | | \--------------- Tp57577_TGAC_v2_mRNA27652/37-61 (63) | | /------- (129) | /------------------55-----------------+ | | \------- Tp57577_TGAC_v2_mRNA23997/10-50 (70) | | | | /--------------- Tp57577_TGAC_v2_mRNA20359/10-48 (9) | | | | | /--63--+ /------- Tp57577_TGAC_v2_mRNA39095/10-50 (24) + | | \---99--+ | | /---83--+ \------- Tp57577_TGAC_v2_mRNA39058/10-50 (56) | | | | | | /--79--+ \---------------------- Tp57577_TGAC_v2_mRNA7859/10-48 (71) | | | | | /--65--+--100--+ \------------------------------ Tp57577_TGAC_v2_mRNA36086/10-48 (35) | | | | | | | \------------------------------------- Tp57577_TGAC_v2_mRNA32495/10-48 (22) | | | | | | /--------------- Tp57577_TGAC_v2_mRNA18191/10-50 (13) | | | | | | |--------------99-------------+ /------- Tp57577_TGAC_v2_mRNA17575/10-50 (15) | | | \---67--+ | | | \------- Tp57577_TGAC_v2_mRNA19730/10-50 (30) | /---65--+ | | | | | /------- Tp57577_TGAC_v2_mRNA22774/9-50 (50) | | | \-----------------100-----------------+ | | | \------- Tp57577_TGAC_v2_mRNA21233/10-50 (75) | | | | | | /------- Tp57577_TGAC_v2_mRNA1803/11-49 (37) | | | /--100--+ | | | | \------- Tp57577_TGAC_v2_mRNA2020/11-49 (39) | | | | \--65--+ \-----------------68-----------------+--------------- Tp57577_TGAC_v2_mRNA8745/43-78 (46) | | | \--------------- Tp57577_TGAC_v2_mRNA11271/9-49 (84) | |------------------------------------------------------------ Tp57577_TGAC_v2_mRNA14081/11-56 (12) | | /--------------- Tp57577_TGAC_v2_mRNA9029/11-51 (32) | | \---------------------97---------------------+ /------- Tp57577_TGAC_v2_mRNA21737/12-52 (38) \--100--+ \------- Tp57577_TGAC_v2_mRNA36392/5-44 (42) |
Phylogenetic tree for protein ? help Back to Top |
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/------------------------------------------------------------------- Tp57577_TGAC_v2_mRNA3977 (1) | |------------------------------------------------------------------- Tp57577_TGAC_v2_mRNA3984 (36) | |------------------------------------------------------------------- Tp57577_TGAC_v2_mRNA23761 (78) | | /----- Tp57577_TGAC_v2_mRNA36392 (2) | /-100+ | | \----- Tp57577_TGAC_v2_mRNA21737 (12) | /-100+ | | \---------- Tp57577_TGAC_v2_mRNA9029 (19) | /------100------+ | | \--------------- Tp57577_TGAC_v2_mRNA14081 (55) | | | | /--------------- Tp57577_TGAC_v2_mRNA8745 (5) | | | | | | /----- Tp57577_TGAC_v2_mRNA2020 (8) | | /----100---+ /-100+ | | | | | \----- Tp57577_TGAC_v2_mRNA1803 (64) | | | \-98-+ | | | \---------- Tp57577_TGAC_v2_mRNA11271 (63) | | | | |-89-+ /----- Tp57577_TGAC_v2_mRNA39095 (17) | | | /------100------+ | | | | \----- Tp57577_TGAC_v2_mRNA39058 (50) | | | | | /-53-+ | | /---------- Tp57577_TGAC_v2_mRNA7859 (44) | | | \-100+ | | | | | /-71-+ /----- Tp57577_TGAC_v2_mRNA36086 (47) | | | | | \-100+ | | | \-100-+ \----- Tp57577_TGAC_v2_mRNA32495 (68) | | | | | | | \--------------- Tp57577_TGAC_v2_mRNA20359 (80) | | | | | | /----- Tp57577_TGAC_v2_mRNA19730 (32) | | | /-89-+ | | | | \----- Tp57577_TGAC_v2_mRNA17575 (56) | | |---------100--------+ | | | \---------- Tp57577_TGAC_v2_mRNA18191 (42) | | | | /-84-+ \------------------------------- Tp57577_TGAC_v2_mRNA23997 (73) | | | | | | /----- Tp57577_TGAC_v2_mRNA16407 (23) | | | /-98-+ | | | | \----- Tp57577_TGAC_v2_mRNA16398 (83) | | | /-94-+ | | | | \---------- Tp57577_TGAC_v2_mRNA24833 (35) | | | /--93-+ | | | | \--------------- Tp57577_TGAC_v2_mRNA28663 (26) | | | | | /-100+ | /-57-+--------------------- Tp57577_TGAC_v2_mRNA28322 (57) | | | | | | | | | | /-89-+ \--------------------- Tp57577_TGAC_v2_mRNA27652 (72) | | | | | | | | | \-94-+ \-------------------------- Tp57577_TGAC_v2_mRNA15248 (86) | | | | | | | \------------------------------- Tp57577_TGAC_v2_mRNA39141 (28) | | | | | | /----- Tp57577_TGAC_v2_mRNA21233 (43) | | \----------------100----------------+ | /--98-+ \----- Tp57577_TGAC_v2_mRNA22774 (75) | | | | | | /----- Tp57577_TGAC_v2_mRNA1462 (13) | | | /-100+ | | | | \----- Tp57577_TGAC_v2_mRNA33537 (77) | | | /----100---+ | | | | \---------- Tp57577_TGAC_v2_mRNA27308 (53) | | | | | | | | /----- Tp57577_TGAC_v2_mRNA29943 (16) | | \-----------100----------+ /----97---+ + | | | \----- Tp57577_TGAC_v2_mRNA24508 (54) | | | | | | \-100-+ /---------- Tp57577_TGAC_v2_mRNA1917 (33) | | | | | | \-99-+ /----- Tp57577_TGAC_v2_mRNA1915 (41) | | \-76-+ | | \----- Tp57577_TGAC_v2_mRNA7596 (82) | | | | /---------- Tp57577_TGAC_v2_mRNA2039 (4) | | | | | | /----- Tp57577_TGAC_v2_mRNA24207 (6) | | /-70-+-76-+ | /-92-+ | | \----- Tp57577_TGAC_v2_mRNA39807 (49) | | | | | | | | /--97-+ \---------- Tp57577_TGAC_v2_mRNA24190 (60) | | | | | | | | /-98-+ \--------------- Tp57577_TGAC_v2_mRNA15032 (14) | | | | | | | | | \--------------------- Tp57577_TGAC_v2_mRNA15177 (74) | | | /-71-+ | | | | | /----- Tp57577_TGAC_v2_mRNA30803 (34) | | | | \---------93---------+ | | | /-70-+ \----- Tp57577_TGAC_v2_mRNA9810 (67) | | | | | | | | | | /----- Tp57577_TGAC_v2_mRNA4734 (20) | | | /-51-+ \------------86-----------+ | | | | | \----- Tp57577_TGAC_v2_mRNA17350 (48) | | | | | | | | /-100+ \------------------------------------ Tp57577_TGAC_v2_mRNA41069 (24) | | | | | | | | | | /----- Tp57577_TGAC_v2_mRNA27961 (30) | | | | \-----------------99----------------+ | | | | \----- Tp57577_TGAC_v2_mRNA38349 (84) | | \--52-+ | | | /----- Tp57577_TGAC_v2_mRNA40586 (58) | | | /-100+ | | | | \----- Tp57577_TGAC_v2_mRNA9557 (71) | | \-----------------81----------------+ | | \---------- Tp57577_TGAC_v2_mRNA26430 (62) | | | | /----- Tp57577_TGAC_v2_mRNA32921 (3) | /-97-+ /------100------+ | | | | \----- Tp57577_TGAC_v2_mRNA29711 (52) | | | | | | | | /---------- Tp57577_TGAC_v2_mRNA35734 (7) | | | /-95-+ | | | | | | /-51-+ /----- Tp57577_TGAC_v2_mRNA29403 (10) | | | | | | \-100+ | | | | \-100-+ \----- Tp57577_TGAC_v2_mRNA36950 (87) | | | /-100+ | | | | | | \--------------- Tp57577_TGAC_v2_mRNA25139 (81) | | | | | | | |------------66-----------+ \-------------------------- Tp57577_TGAC_v2_mRNA22346 (61) | | | | | | | | /----- Tp57577_TGAC_v2_mRNA32568 (25) | | | \-----------100-----------+ | | | \----- Tp57577_TGAC_v2_mRNA25233 (70) | | | | | | /----- Tp57577_TGAC_v2_mRNA12334 (9) | | | /---100---+ | | | | \----- Tp57577_TGAC_v2_mRNA12294 (45) | | | | | | | /--54-+ /---------- Tp57577_TGAC_v2_mRNA9914 (15) | | | | | | | | | | \-79-+ /----- Tp57577_TGAC_v2_mRNA315 (66) | | | | \-100+ | | | /-100+ \----- Tp57577_TGAC_v2_mRNA12311 (79) | | | | | | | | | | /----- Tp57577_TGAC_v2_mRNA12316 (22) \-100+ \--------------99--------------+ \------100------+ | | \----- Tp57577_TGAC_v2_mRNA12286 (39) | | | \-------------------------- Tp57577_TGAC_v2_mRNA5032 (37) | | /---------- Tp57577_TGAC_v2_mRNA12860 (11) | | | /-100+ /----- Tp57577_TGAC_v2_mRNA12155 (21) | | \-99-+ | /----100---+ \----- Tp57577_TGAC_v2_mRNA29038 (76) | | | | | \--------------- Tp57577_TGAC_v2_mRNA21561 (65) | | | | /----- Tp57577_TGAC_v2_mRNA25310 (18) | | /-100+ | | | \----- Tp57577_TGAC_v2_mRNA25304 (31) | /-74-+ /-98-+ | | | | \---------- Tp57577_TGAC_v2_mRNA16639 (51) | | | /--68-+ | | | | \--------------- Tp57577_TGAC_v2_mRNA25300 (59) | | |-55-+ | /-87-+ | \--------------------- Tp57577_TGAC_v2_mRNA11384 (29) | | | | | | | \-------------------------- Tp57577_TGAC_v2_mRNA21862 (38) | | | | | | /----- Tp57577_TGAC_v2_mRNA35281 (46) | | \-----------100-----------+ \------------99-----------+ \----- Tp57577_TGAC_v2_mRNA7829 (85) | | /----- Tp57577_TGAC_v2_mRNA547 (27) | /-99-+ | | \----- Tp57577_TGAC_v2_mRNA548 (40) \------------98-----------+ \---------- Tp57577_TGAC_v2_mRNA9359 (69) |