PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP927
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Subtree rooted at node 221: /---------- Do007708.1 [Dichanthelium oligosanthes] (5) | /-100+ /----- Sevir.7G115200.1.p [Setaria viridis] (33) | \-100+ | \----- Seita.7G107800.1.p [Setaria italica] (133) | /------------92-----------+ /----- GRMZM2G355469_P01 [Zea mays] (6) | | /-100+ | | | \----- Sobic.006G089000.1.p [Sorghum bicolor] (13) | \-100+ | \---------- GRMZM2G137380_P01 [Zea mays] (14) | | /----- Zmw_sc00094.1.g00540.1 [Zoysia matrella] (9) | /-100+ | | \----- Zmw_sc02041.1.g00060.1 [Zoysia matrella] (123) | | | |---------- Zjn_sc00013.1.g00010.1.am.mk [Zoysia japonica] (26) | /-79-+ | | |---------- Zmw_sc01403.1.g00020.1 [Zoysia matrella] (68) | | | | | | /----- Zmw_sc01403.1.g00010.1 [Zoysia matrella] (150) | | \-72-+ | /-100+ \----- Zmw_sc00094.1.g00550.1 [Zoysia matrella] (138) | | | | | | /----- Zpz_sc01351.1.g00050.1.sm.mk [Zoysia pacifica] (10) | | | /-74-+ | /-99-+ | | \----- Zmw_sc07075.1.g00020.1 [Zoysia matrella] (11) | | | \-77-+ | | | \---------- Zpz_sc01351.1.g00040.1.sm.mk [Zoysia pacifica] (100) | | | /-95-+ | \-------------------- Oropetium_20150105_08228A [Oropetium thomaeum] (93) | | /-100+ | | | | /----- Zpz_sc01557.1.g00020.1.sm.mk [Zoysia pacifica] (19) | | | | | | | | | /-64-+----- Zmw_sc00106.1.g00180.1 [Zoysia matrella] (34) | | | | | | | | | \------100-----+ \----- Zmw_sc00248.1.g00140.1 [Zoysia matrella] (120) | | | | | | | \---------- Zjn_sc00019.1.g04580.1.am.mk [Zoysia japonica] (38) | | | | | | /----- Seita.9G143900.1.p [Setaria italica] (12) | | /--97-+ /---100---+ | | | | | \----- Sevir.9G141900.1.p [Setaria viridis] (80) | | | | | | | | | /-100+ /---------- Pahal.I02284.1 [Panicum hallii] (35) | | | | | | | | | | | | \-100+ /----- Pavir.9NG165900.1.p [Panicum virgatum] (44) | | | | /-100+ \-100+ | | | | | | \----- Pavir.9KG057700.1.p [Panicum virgatum] (54) | | | | | | | | | \-96-+ \-------------------- Do025519.1 [Dichanthelium oligosanthes] (90) | | | | /-52-+ | | | /----- GRMZM2G120021_P01 [Zea mays] (45) | | \-93-+ \--------100--------+ | | | \----- Sobic.001G140900.3.p [Sorghum bicolor] (134) | | | | | | /----- Pavir.9KG057800.1.p [Panicum virgatum] (40) | | | /-100+ | | | | \----- Pahal.I02285.1 [Panicum hallii] (70) | | | /-99-+ | | | | | /----- Seita.9G144000.1.p [Setaria italica] (71) | | | | \-100+ | | | /-100+ \----- Sevir.9G142000.1.p [Setaria viridis] (120) | | | | | | | | | \--------------- Do009524.1 [Dichanthelium oligosanthes] (89) | | \------100------+ | | | /----- Sobic.001G141100.1.p [Sorghum bicolor] (43) | | \------100-----+ /-56-+ | \----- GRMZM2G155043_P01 [Zea mays] (74) | | | | | | /----- Sevir.9G383800.1.p [Setaria viridis] (8) | | | /-100+ | | | | \----- Seita.9G378600.1.p [Setaria italica] (16) | | \----------------100----------------+ | | \---------- Pavir.9NG541400.1.p [Panicum virgatum] (77) | | | | /---------- Pavir.3KG138700.1.p [Panicum virgatum] (20) | | | /-89-+ | /-100+ /----- Pavir.8NG304900.1.p [Panicum virgatum] (58) | | | | \-100+ | | | /-80-+ \----- Pahal.C01288.1 [Panicum hallii] (140) | | | | | | | | | \--------------- Do005732.1 [Dichanthelium oligosanthes] (85) | | \--------------100-------------+ | | | /----- Seita.3G055600.1.p [Setaria italica] (97) | | \------100-----+ | | \----- Sevir.3G056400.1.p [Setaria viridis] (99) | | --79-+ \-------------------------------------------------------- PH01004870G0100 [Phyllostachys heterocycla] (140) | | /----- Brast02G259000.1.p [Brachypodium stacei] (22) | /---------99--------+ | | \----- Bradi1g12770.2.p [Brachypodium distachyon] (112) | | | | /----- Traes_4DS_ECE3F21FA.1 [Triticum aestivum] (47) | | /-82-+ | | | \----- Traes_4DS_069F2900B.1 [Triticum aestivum] (48) \----------------100----------------+ /-71-+ | | \---------- Traes_4DS_6A9EB40A4.1 [Triticum aestivum] (75) | /-95-+ | | | /----- TRIUR3_05977-P1 [Triticum urartu] (82) | | \---100---+ \-100+ \----- EMT20704 [Aegilops tauschii] (135) | \-------------------- MLOC_42946.1 [Hordeum vulgare] (122) Subtree rooted at node 257: /--------------- 462948128 [Eragrostis tef] (2) | | /----- Zpz_sc01557.1.g00030.1.sm.mk [Zoysia pacifica] (25) /---------99---------+ /-100+ | | | \----- Zmw_sc00106.1.g00190.1 [Zoysia matrella] (42) | \-100+ | | /----- Zmw_sc00248.1.g00130.1 [Zoysia matrella] (67) | \-65-+ | \----- Zjn_sc00669.1.g00010.1.sm.mk [Zoysia japonica] (136) | | /----- Sevir.7G176900.1.p [Setaria viridis] (15) /----94---+ /-----------100----------+ | | | \----- Seita.7G167600.1.p [Setaria italica] (94) | | | | | | /----- Sevir.9G141800.1.p [Setaria viridis] (36) | | | /---100---+ | | | | \----- Seita.9G143800.1.p [Setaria italica] (57) | | | | | \--65-+ /-57-+ /----- Pavir.9KG057600.1.p [Panicum virgatum] (55) | | | | /-100+ | | | | | \----- Pavir.9NG165600.1.p [Panicum virgatum] (125) | | /-100+ \-100+ | | | | \---------- Pahal.I02283.1 [Panicum hallii] (132) | | | | | \-100+ \-------------------- Do008895.1 [Dichanthelium oligosanthes] (81) | | | | /----- GRMZM2G095899_P01 [Zea mays] (84) | \--------100--------+ | \----- Sobic.001G140800.1.p [Sorghum bicolor] (87) | | /------------------------------------ LPERR03G24050.1 [Leersia perrieri] (3) /-73-+ | | | | /----- OBART03G29050.1 [Oryza barthii] (17) | | | /-70-+ | | | | \----- ORGLA03G0269200.1 [Oryza glaberrima] (29) | | | | | | | |---------- BGIOSGA010080-PA [Oryza sativa indica] (31) | | | | | | | /-100+---------- LOC_Os03g46860.1 [Oryza sativa japonica] (50) | | /-100+ | | | | | | | |---------- ORUFI03G30210.1 [Oryza rufipogon] (51) | | | | /-100+ | | | | | | | \---------- ONIVA03G30270.1 [Oryza nivara] (86) | | | | | | | | | | /-100+ \--------------- OMERI03G25360.1 [Oryza meridionalis] (142) | | | | | | | | | | /-100+ \-------------------- OGLUM03G29270.1 [Oryza glumaepatula] (53) | | | | | | | | | \-100-+ \------------------------- OPUNC03G26600.1 [Oryza punctata] (76) | | | | | | | \------------------------------ OB03G36530.1 [Oryza brachyantha] (27) | \-64-+ /-76-+ | /---------- MLOC_68896.2 [Hordeum vulgare] (64) | | | | | | | /-97-+ /----- EMT10961 [Aegilops tauschii] (92) | | | | \-100+ | | | /-66-+ \----- TRIUR3_15085-P1 [Triticum urartu] (137) | | | | | | | | | \--------------- Bradi1g12760.2.p [Brachypodium distachyon] (72) | | | | | | | /-79-+ /----- Traes_4DS_E4442B2FF.1 [Triticum aestivum] (65) | | | | | /-99-+ | | | | | | \----- TRIUR3_05978-P1 [Triticum urartu] (130) | | \-------71------+ \---100---+ | | | \---------- MLOC_36423.5 [Hordeum vulgare] (98) | | | | | \------------------------- PH01004440G0090 [Phyllostachys heterocycla] (73) | | | | /------------------------- (221) | | | | | | /-------------------- OPUNC03G26580.1 [Oryza punctata] (24) | | | | | | | | /----- ORGLA03G0268800.1 [Oryza glaberrima] (28) | \------------55-----------+ | /-95-+ | | | | \----- OBART03G29020.1 [Oryza barthii] (96) | | | | | | | | /----- ONIVA03G30250.1 [Oryza nivara] (37) | \-100+ | | /-99-+ | | |----- LOC_Os03g46790.1 [Oryza sativa japonica] (49) | | | /-64-+-91-+ | | | | | |----- ORUFI03G30180.1 [Oryza rufipogon] (111) | | | | | | | | | | | \----- BGIOSGA013293-PA [Oryza sativa indica] (113) | | \-100+ | | | | \---------- OGLUM03G29200.1 [Oryza glumaepatula] (46) | | | | | \--------------- KN539201.1_FGP004 [Oryza longistaminata] (131) | | | | /----- EMT16739 [Aegilops tauschii] (32) | | /-100+ | | | \----- Traes_4BL_19F19CCC0.1 [Triticum aestivum] (91) | | /---100---+ | | | \---------- MLOC_13159.1 [Hordeum vulgare] (129) | | | | | | /----- TRIUR3_27148-P1 [Triticum urartu] (61) | | /-78-+ /-51-+ | | | | | \----- TRIUR3_19095-P1 [Triticum urartu] (69) | | | | /-78-+ | | | | | \---------- EMT32260 [Aegilops tauschii] (110) | | /-100+ \-79-+ | | | | \--------------- MLOC_67483.1 [Hordeum vulgare] (130) | | | | | | | | /----- EMT15172 [Aegilops tauschii] (88) | \------------97-----------+ \--------100--------+ | | \----- EMT33188 [Aegilops tauschii] (190) --100+ | | | /----- Bradi1g12780.4.p [Brachypodium distachyon] (124) | \-----------100----------+ | \----- Brast02G258700.1.p [Brachypodium stacei] (128) | | /----- Traes_5AS_FFFE74F61.1 [Triticum aestivum] (21) | /-56-+ | | \----- TRIUR3_29908-P1 [Triticum urartu] (52) | /-100+ | | \---------- EMT10895 [Aegilops tauschii] (126) | | | /-98-+ /----- EMT16023 [Aegilops tauschii] (83) | | | /-100+ | | | | \----- EMT26066 [Aegilops tauschii] (180) | | \-100+ | /---------97---------+ \---------- TRIUR3_13152-P1 [Triticum urartu] (143) | | | | | | /----- Bradi4g00920.2.p [Brachypodium distachyon] (114) | | \------100-----+ | | \----- Brast10G007900.1.p [Brachypodium stacei] (139) | | | | /------------------------------ LPERR12G16560.1 [Leersia perrieri] (23) | | | | | | /---------- KN539001.1_FGP011 [Oryza longistaminata] (41) | | | | | | | /---100---+ /----- LOC_Os12g43620.1 [Oryza sativa japonica] (60) \---------96--------+ | | \-97-+ | | | \----- ORUFI12G22050.1 [Oryza rufipogon] (119) | | | | /--97-+ | /----- BGIOSGA037855-PA [Oryza sativa indica] (59) | | | | | | | | /-100+ |----- ORGLA12G0170500.1 [Oryza glaberrima] (115) | | | | | /-88-+ | | | | | | |----- ONIVA03G07570.1 [Oryza nivara] (117) | | | | | | | | | | | | /-100+ \----- OGLUM12G21470.1 [Oryza glumaepatula] (118) \-98-+ \-100+ | | | | | \-98-+ \---------- OBART12G19700.1 [Oryza barthii] (127) | | | | | \--------------- OMERI12G15000.1 [Oryza meridionalis] (160) | | | \------------------------- OPUNC12G17950.1 [Oryza punctata] (63) | \------------------------------------ OB12G26450.1 [Oryza brachyantha] (79) Root part of tree: /------------------------------------------------------------------ Oropetium_20150105_28232A [Oropetium thomaeum] (1) | |------------------------------------------------------------------ Oropetium_20150105_26110A [Oropetium thomaeum] (121) | | /-------------------------------------------- (257) | | | | /------- Pavir.3KG561900.1.p [Panicum virgatum] (4) | | /--100--+ | | | \------- Pavir.3NG266900.1.p [Panicum virgatum] (110) | | /-----100-----+ | | | \--------------- Pahal.C04862.1 [Panicum hallii] (7) | /--98--+ | | | | | /------- GRMZM2G049686_P01 [Zea mays] (30) + | | /---88--+ /--100--+ | | | | | | \------- GRMZM2G068604_P01 [Zea mays] (56) | | | | | /--100-+ | | | | | | \--------------- Sobic.008G186100.2.p [Sorghum bicolor] (39) | | \--100-+ \--99--+ | | | \---------------------- Do003007.1 [Dichanthelium oligosanthes] (66) | /--100--+ | | | | | /------- Seita.3G401700.1.p [Setaria italica] (62) | | | \-------------100-------------+ | | | \------- Sevir.3G419500.1.p [Setaria viridis] (116) | | | | | | /------- Zmw_sc01626.1.g00110.1 [Zoysia matrella] (18) | | | /---95--+ \--88--+ | | \------- Zpz_sc01466.1.g00120.1.sm.mk [Zoysia pacifica] (141) | \----------------100----------------+ | | /------- Zmw_sc01536.1.g00120.1 [Zoysia matrella] (78) | \--100--+ | \------- Zjn_sc00088.1.g00480.1.sm.mk [Zoysia japonica] (95) | \----------------------------------------------------------- Oropetium_20150105_23269A [Oropetium thomaeum] (170) |