PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1355
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 160: /----- XP_013584762.1 [Brassica oleracea] (2) /---100---+ | \----- GSBRNA2T00031996001 [Brassica napus] (71) | /-100-+ /----- GSBRNA2T00087993001 [Brassica napus] (49) | | /-99-+ | | | \----- XP_009119085.1 [Brassica rapa] (91) | \-59-+ /-100+ | /----- RrC378_p8 [Raphanus raphanistrum] (62) | | \-98-+ | | \----- Rsa1.0_00773.1_g00001.1 [Raphanus sativus] (82) /-100+ | | | \--------------------- 676760524 [Sisymbrium irio] (29) | | /-100+ \-------------------------- Tp1g04980 [Thellungiella parvula] (72) | | | \------------------------------- Thhalv10009992m [Eutrema salsugineum] (30) | | /----- Araha.8855s0002.1.p [Arabidopsis halleri] (5) | /-100+ /-100+ | \----- 333922 [Arabidopsis lyrata] (16) | | /----100---+ | | | \---------- AT1G06170.1 [Arabidopsis thaliana] (85) | | | | | | /----- Cagra.1671s0248.1.p [Capsella grandiflora] (7) | \------100-----+ /---100---+ | | | \----- Carubv10009189m [Capsella rubella] (60) | | | /-100+ \--93-+ /----- Csa17g009590.1 [Camelina sativa] (18) | | | /-100+ | | | | \----- Csa14g007560.1 [Camelina sativa] (58) | | \-89-+ | | \---------- Bostr.25219s0340.1.p [Boechera stricta] (39) | | | |----------------------------------------- KFK42944.1 [Arabis alpina] (45) | | | \----------------------------------------- AA23G00016 [Aethionema arabicum] (55) | | /----- Csa16g012400.1 [Camelina sativa] (3) | /-100+ | | \----- Csa07g011670.1 [Camelina sativa] (31) | /-100+ | | \---------- Csa05g030080.1 [Camelina sativa] (8) | /-100-+ | | | /----- Cagra.6952s0001.1.p [Capsella grandiflora] (25) | | \---100---+ | /-80-+ \----- Carubv10023056m [Capsella rubella] (53) | | | | | \--------------------- Bostr.24513s0102.1.p [Boechera stricta] (41) | /-54-+ /--51-+ | | /----- AT2G31220.1 [Arabidopsis thaliana] (19) | | | \---------77---------+ | | | \----- 482049 [Arabidopsis lyrata] (44) | | | | | | /----- Tp4g13710 [Thellungiella parvula] (6) | | | /---------87---------+ | | | | \----- Thhalv10016616m [Eutrema salsugineum] (69) | | | | | | /-53-+ | /----- GSBRNA2T00048621001 [Brassica napus] (15) | | | | | /-100+ | | | | | | \----- XP_009144238.1 [Brassica rapa] (23) | | | | | /-100+ | | | | | | | /----- XP_013633827.1 [Brassica oleracea] (59) | | | | | | \-100+ | | | | | /-100-+ \----- GSBRNA2T00027161001 [Brassica napus] (95) | | | | | | | | | | | | | | /----- Rsa1.0_03925.1_g00002.1 [Raphanus sativus] (46) | | | \-99-+ | \---100---+ | | | |-100+ \----- RrC8172_p2 [Raphanus raphanistrum] (66) /-53-+ | | | | | | | | | | /----- 676710090 [Sisymbrium irio] (43) | | | | | \------100------+ | | \----54---+ | \----- 676710062 [Sisymbrium irio] (89) | | | | | | | | /----- RrC9511_p3 [Raphanus raphanistrum] (24) | | | | /-100+ | | | | | \----- Rsa1.0_00496.1_g00004.1 [Raphanus sativus] (47) | | | | | | | | | | /----- XP_013634648.1 [Brassica oleracea] (35) | | | \------100------+-100+ | | | | \----- GSBRNA2T00085729001 [Brassica napus] (70) | | | | | | | | /----- GSBRNA2T00020547001 [Brassica napus] (86) | | | \-100+ | | | \----- XP_009141141.1 [Brassica rapa] (87) | | | | | \------------------------------------ AA32G00604 [Aethionema arabicum] (38) | | | \---------------------------------------------------- XP_010522155.1 [Tarenaya hassleriana] (13) | | /----- Neem_38851_f_1 [Azadirachta indica] (4) | /-100+ | | \----- Neem_10870_f_2 [Azadirachta indica] (96) | /-100+ | | | /----- Neem_10870_f_3 [Azadirachta indica] (52) | | \-100+ | /--97-+ \----- Neem_35989_f_1 [Azadirachta indica] (74) /-51-+ | | | | | | /----- Ciclev10019669m [Citrus clementina] (9) | | | \---100---+ | | /-----------100----------+ \----- orange1.1g009555m [Citrus sinensis] (32) | | | | | | | | /----- Ciclev10006940m [Citrus clementina] (65) | | | \------100------+ | | | \----- orange1.1g043851m [Citrus sinensis] (67) | | | | | | /--------------------- Gh_D06G1740 [Gossypium hirsutum] (11) | | | | | | | | /----- Cotton_A_13783_BGI-A2_v1.0 [Gossypium arboreum] (36) | | | | /-99-+ | | | /-99-+ | \----- Cotton_A_13785_BGI-A2_v1.0 [Gossypium arboreum] (78) | | | | | /-100+ | | | | | | \---------- Gh_A06G1396 [Gossypium hirsutum] (50) | | | | \-100-+ | | /-100-+ /-100+ | /----- Gh_A06G1395 [Gossypium hirsutum] (51) | | | | | | \---100---+ | | | | | | \----- Cotton_A_13784_BGI-A2_v1.0 [Gossypium arboreum] (83) --50-+ | | | | | | | | | /-100+ \-------------------------- Gorai.010G191900.1 [Gossypium raimondii] (37) | | | | | | | | | | | | /----- Gh_D06G1739 [Gossypium hirsutum] (42) | | | | | \-----------100-----------+ | | | | | \----- Gorai.010G191800.1 [Gossypium raimondii] (57) | | | | /-97-+ | \-99-+ | | | /----- Gorai.012G081100.1 [Gossypium raimondii] (17) | | | | | /-100+ | | | | | | \----- Gh_D04G0689 [Gossypium hirsutum] (54) | | \-100+ \-----------100-----------+ | | | \---------- Cotton_A_30832_BGI-A2_v1.0 [Gossypium arboreum] (21) | | | | | \----------------------------------------- Thecc1EG042366t1 [Theobroma cacao] (90) | | | | /----- Eucgr.E04246.1.p [Eucalyptus grandis] (22) | \----------------------100---------------------+ | \----- Eucgr.E04247.1.p [Eucalyptus grandis] (63) | \-------------------------------------------------------------- Araha.4530s0003.1.p [Arabidopsis halleri] (27) Root part of tree: /------------------------------------------------------------------- Bostr.24513s0104.1.p [Boechera stricta] (1) | | /------- (160) | /-------------------------100------------------------+ | | \------- XP_010543057.1 [Tarenaya hassleriana] (28) | | | | /------- GSBRNA2T00085730001 [Brassica napus] (10) | | /-100-+ | | | \------- GSBRNA2T00020545001 [Brassica napus] (34) | | /--100-+ | | | \------------- XP_009141140.1 [Brassica rapa] (84) | | /--100-+ | | | | /------- XP_013634977.1 [Brassica oleracea] (75) | | | \-----100----+ | | /-100-+ \------- GSBRNA2T00085731001 [Brassica napus] (92) | | | | | | | | /------- Rsa1.0_00496.1_g00005.1 [Raphanus sativus] (64) | | | \--------100--------+ | | | \------- RrC9511_p2 [Raphanus raphanistrum] (77) | | /--58--+ | | | | /------- GSBRNA2T00027163001 [Brassica napus] (33) | | | | /-100-+ | | | | | \------- XP_013635096.1 [Brassica oleracea] (68) |--100-+ /--99--+ \--------100--------+ | | | | \------------- GSBRNA2T00048622001 [Brassica napus] (79) + | | | | | | | /------- 676710094 [Sisymbrium irio] (56) | | /--100-+ \---------------100--------------+ | | | | \------- 676710066 [Sisymbrium irio] (81) | | | | | | | \----------------------------------------------- Tp4g13700 [Thellungiella parvula] (61) | | | | |--74-+------------------------------------------------------ Thhalv10017830m [Eutrema salsugineum] (14) | | | | | | /------------- Thhalv10017908m [Eutrema salsugineum] (20) | | | | | | \-------------------74-------------------+ /------- 676710064 [Sisymbrium irio] (88) | | \-100-+ | | \------- 676710092 [Sisymbrium irio] (94) | | | | /------------- AT2G31210.1 [Arabidopsis thaliana] (26) | | | | \----------------------97----------------------+ /------- Araha.4530s0002.1.p [Arabidopsis halleri] (73) | \-100-+ | \------- 482048 [Arabidopsis lyrata] (76) | | /------- Cagra.7286s0012.1.p [Capsella grandiflora] (12) | /-----100----+ | | \------- Carubv10023260m [Capsella rubella] (40) | | \----------------------100---------------------+ /------- Csa16g012410.1 [Camelina sativa] (48) | /--99-+ | | \------- Csa07g011680.1 [Camelina sativa] (93) \--100-+ \------------- Csa05g030090.1 [Camelina sativa] (80) |