PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM877
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 164: /----- Gorai.011G289400.1 [Gossypium raimondii] (2) /-99-+ | \----- Gh_D10G2455 [Gossypium hirsutum] (80) /--------100--------+ | | /----- Cotton_A_15843_BGI-A2_v1.0 [Gossypium arboreum] (16) | \-93-+ | \----- Gh_A10G2134 [Gossypium hirsutum] (58) | | /----- Gh_A06G1433 [Gossypium hirsutum] (4) | /-100+ | | \----- Cotton_A_13838_BGI-A2_v1.0 [Gossypium arboreum] (30) | /-61-+ /-100-+ | \---------- Gh_D06G1781 [Gossypium hirsutum] (45) | | /-100+ | | | \--------------- Gorai.010G196500.1 [Gossypium raimondii] (38) | | | | | /-70-+ /----- Gh_A13G0138 [Gossypium hirsutum] (19) | | | | /-100+ | | | | | \----- Cotton_A_00988_BGI-A2_v1.0 [Gossypium arboreum] (84) | | | \---100---+ /-----------100----------+ \-100+ | /----- Gorai.013G017600.1 [Gossypium raimondii] (29) | | | \-99-+ | | | \----- Gh_D13G0160 [Gossypium hirsutum] (76) | | | | | \------------------------- Thecc1EG042489t1 [Theobroma cacao] (21) | | | | /----- Ciclev10030920m [Citrus clementina] (69) | \--------------100-------------+ | \----- orange1.1g006236m [Citrus sinensis] (90) | | /---------- AT5G58620.1 [Arabidopsis thaliana] (8) | | | /------100-----+ /----- Araha.5856s0005.1.p [Arabidopsis halleri] (34) | | \-77-+ | | \----- 495985 [Arabidopsis lyrata] (62) | | | | /----- Csa11g092360.1 [Camelina sativa] (14) | | /-64-+ | /----100---+ | \----- Csa18g031800.1 [Camelina sativa] (110) | | | /-100+ | | | | \---------- Csa02g064250.1 [Camelina sativa] (94) | | | /-93-+ | | | | | /----- Carubv10026101m [Capsella rubella] (25) | | | | \---100---+ | | \-100+ \----- Cagra.0891s0057.1.p [Capsella grandiflora] (42) | /-99-+ | | | | \-------------------- Bostr.26833s0388.1.p [Boechera stricta] (59) | | | | | | /------------------------------ Thhalv10012984m [Eutrema salsugineum] (13) | | | | | | | | /------------------------- Tp6g20320 [Thellungiella parvula] (15) | | | | | | | \--95-+ | /----- GSBRNA2T00004938001 [Brassica napus] (52) | | | | /-100+ | | | | | \----- XP_009120378.1 [Brassica rapa] (88) | | | | /-100+ | /-100+ \-99-+ | | /----- XP_013612376.1 [Brassica oleracea] (55) | | | | | \-100+ | | | | /-100+ \----- GSBRNA2T00133403001 [Brassica napus] (72) | | | | | | | | | | | | /----- Rsa1.0_13967.1_g00001.1 [Raphanus sativus] (61) | | | \-95-+ \---100---+ --64-+ | | | \----- RrC375_p3 [Raphanus raphanistrum] (73) | /-100+ | | | | | | \-------------------- 676738006 [Sisymbrium irio] (54) | | | | | | | \----------------------------------------- AA5G00005 [Aethionema arabicum] (83) | | | | | | /----- XP_010535371.1 [Tarenaya hassleriana] (9) | | \-------------------100------------------+ | | \----- XP_010541453.1 [Tarenaya hassleriana] (150) | | | | /----- Gorai.001G116400.1 [Gossypium raimondii] (10) | | /-100+ | | | \----- Gh_D07G1024 [Gossypium hirsutum] (86) | | /---100---+ | | | | /----- Gh_A07G0945 [Gossypium hirsutum] (71) | | | \-100+ | | | \----- Cotton_A_09522_BGI-A2_v1.0 [Gossypium arboreum] (93) | | | | | | /----- Gh_A09G0850 [Gossypium hirsutum] (22) | | /-51-+ /-100+ | | | | | \----- Cotton_A_21124_BGI-A2_v1.0 [Gossypium arboreum] (27) | | | | /-100+ | | | | | | /----- Gh_D09G0872 [Gossypium hirsutum] (50) | | | | | \-100+ | | | | | \----- Gorai.006G106300.1 [Gossypium raimondii] (92) | /-100+ | \-100+ | | | | | /----- Gh_A09G0849 [Gossypium hirsutum] (32) | | | | | /-100+ | | | | | | \----- Cotton_A_21125_BGI-A2_v1.0 [Gossypium arboreum] (64) | | | | \-100+ | | | | \---------- Cotton_A_21121_BGI-A2_v1.0 [Gossypium arboreum] (68) | | | | | | | | /----- Cotton_A_12946_BGI-A2_v1.0 [Gossypium arboreum] (31) | | | | /-100+ | | | /-100+ | \----- Gh_A05G0730 [Gossypium hirsutum] (36) | | | | |------100-----+ | | | | | | /----- Gorai.009G091200.1 [Gossypium raimondii] (98) | | | | | \-100+ | | | | | \----- Gh_D05G0867 [Gossypium hirsutum] (120) | | | | | | | | | | /----- Gh_D08G0066 [Gossypium hirsutum] (39) \-99-+ | | | /-100+ | | | | | \----- Gorai.004G007300.1 [Gossypium raimondii] (100) | | /--88-+ |------100-----+ | | | | | | /----- Gh_A08G0027 [Gossypium hirsutum] (79) | | | | | \-99-+ | | | | | \----- Cotton_A_21402_BGI-A2_v1.0 [Gossypium arboreum] (96) | | | | | | | | | \------------------------- Thecc1EG041605t1 [Theobroma cacao] (160) | \------100-----+ | | | | /----- orange1.1g005264m [Citrus sinensis] (28) | | \-----------100----------+ | | \----- Ciclev10027883m [Citrus clementina] (63) | | | \------------------------------------ evm.model.supercontig_112.6 [Carica papaya] (26) | | /----- Eucgr.G03067.1.p [Eucalyptus grandis] (51) \------------------------100-----------------------+ \----- EcC004212.20 [Eucalyptus camaldulensis] (66) Subtree rooted at node 191: /----- (164) /-100+ | \----- Eucgr.J00202.1.p [Eucalyptus grandis] (57) /---------------------100---------------------+ | | /----- XP_010554668.1 [Tarenaya hassleriana] (41) | \-100+ | \----- XP_010534604.1 [Tarenaya hassleriana] (56) | | /----- XP_009143241.1 [Brassica rapa] (5) | /-100+ | | \----- GSBRNA2T00011209001 [Brassica napus] (46) | /-100+ | | | /----- GSBRNA2T00014964001 [Brassica napus] (60) | | \-100+ | /-100+ \----- XP_013637248.1 [Brassica oleracea] (140) | | | | /-95-+ \--------------- Rsa1.0_00354.1_g00020.1 [Raphanus sativus] (95) | | | | | \-------------------- RrC11712_p1 [Raphanus raphanistrum] (24) | | | /-100+ /----- Rsa1.0_05362.1_g00001.1 [Raphanus sativus] (6) | | | /------100-----+ | | | | \----- RrC24910_p1 [Raphanus raphanistrum] (35) | | | | | | \-100+ /--------------- GSBRNA2T00124720001 [Brassica napus] (12) | | | | /-100+ /--93-+ | | /----- GSBRNA2T00028718001 [Brassica napus] (67) | | | | \-100+ /-97-+ | | | | | | \----- XP_013621926.1 [Brassica oleracea] (130) | | | | \-100+ | | /-99-+ | \---------- XP_009133413.1 [Brassica rapa] (75) | | | | | | | | | \------------------------------ 676735566 [Sisymbrium irio] (81) | | /-55-+ | | | | | \------------------------------------ Tp4g22490 [Thellungiella parvula] (43) | | | | | | | \----------------------------------------- Thhalv10016372m [Eutrema salsugineum] (44) | | | | | | /---------- Csa04g054400.1 [Camelina sativa] (23) | | | | | | | /-100+ /----- Csa06g044480.1 [Camelina sativa] (97) --100+ | /-100+ | \-60-+ | | | | | \----- Csa05g012690.1 [Camelina sativa] (99) | | | | /-55-+ | | | | | |--------------- AT2G40140.1 [Arabidopsis thaliana] (77) | | | | | | | | | | /-72-+ \--------------- Araha.32835s0001.1.p [Arabidopsis halleri] (91) | | | | | | | \-100+ | | \-------------------- Bostr.23794s0043.1.p [Boechera stricta] (49) | | \---------100--------+ | | | /----- Cagra.2495s0002.1.p [Capsella grandiflora] (40) | | \--------100--------+ | | \----- Carubv10022848m [Capsella rubella] (74) | | | \--------------------------------------------------- AA29G00263 [Aethionema arabicum] (20) | \------------------------------------------------------------- AA61G00075 [Aethionema arabicum] (47) Root part of tree: /------------------------------------------------------------------ Tp5g06550 [Thellungiella parvula] (1) | | /--------- (191) | /-----------------------94----------------------+ | | \--------- Thhalv10005860m [Eutrema salsugineum] (37) | | | | /--------- Cagra.0925s0010.1.p [Capsella grandiflora] (3) | | /--------100-------+ | | | \--------- Carubv10016897m [Capsella rubella] (89) | | | |---100--+ /---100---+ /--------- Csa04g042360.1 [Camelina sativa] (17) | | | | /---100---+ | | | | | \--------- Csa06g030660.1 [Camelina sativa] (33) | | /---99---+ \---100--+ | | | | \------------------- Csa09g068150.1 [Camelina sativa] (65) | | | | | | | \-------------------------------------- Bostr.20505s0158.1.p [Boechera stricta] (11) + \---100---+ | | /--------- 486038 [Arabidopsis lyrata] (48) | | /---100---+ | | | \--------- Araha.26365s0002.1.p [Arabidopsis halleri] (85) | \-------------95------------+ | \------------------- AT3G55980.1 [Arabidopsis thaliana] (170) | | /--------- XP_013604703.1 [Brassica oleracea] (7) | /---100---+ | | \--------- GSBRNA2T00156011001 [Brassica napus] (53) | /---100--+ | | | /--------- GSBRNA2T00014340001 [Brassica napus] (18) | | \----65---+ | /---100---+ \--------- XP_009116292.1 [Brassica rapa] (78) | | | | | | /--------- Rsa1.0_01121.1_g00002.1 [Raphanus sativus] (82) \------------100------------+ \--------100-------+ | \--------- RrC904_p3 [Raphanus raphanistrum] (87) | \-------------------------------------- 676776022 [Sisymbrium irio] (70) |