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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM255
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 378:
/----- Csa20g082130.1 [Camelina sativa] (2)
/-53-+
| \----- Csa18g002170.1 [Camelina sativa] (100)
|
/-97-+---------- Csa14271s010.1 [Camelina sativa] (144)
| |
| \---------- Csa11g064060.1 [Camelina sativa] (149)
|
| /----- AT5G47640.1 [Arabidopsis thaliana] (13)
|---100---+
| \----- 916623 [Arabidopsis lyrata] (115)
/-50-+
| | /----- Cagra.15822s0014.1.p [Capsella grandiflora] (42)
| |---100---+
| | \----- Carubv10028496m [Capsella rubella] (164)
| |
| |--------------- AA751G00004 [Aethionema arabicum] (64)
| |
| \--------------- Bostr.14419s0057.1.p [Boechera stricta] (142)
|
|-------------------- KFK31356.1 [Arabis alpina] (4)
|
| /----- RrC2292_p5 [Raphanus raphanistrum] (10)
| /---100---+
| | \----- Rsa1.0_00414.1_g00022.1 [Raphanus sativus] (210)
| |
|-100+ /---------- GSBRNA2T00033465001 [Brassica napus] (45)
| | |
| | |---------- XP_013611132.1 [Brassica oleracea] (49)
| \-100+
| | /----- XP_009114258.1 [Brassica rapa] (91)
/-85-+ \-100+
| | \----- GSBRNA2T00072378001 [Brassica napus] (170)
| |
| |-------------------- 676729274 [Sisymbrium irio] (70)
| |
| |-------------------- Thhalv10001037m [Eutrema salsugineum] (86)
| |
| | /----- XP_009128989.1 [Brassica rapa] (92)
| | /-100+
| | | \----- GSBRNA2T00041612001 [Brassica napus] (94)
| | /-91-+
/-------80------+ | | | /----- XP_013620411.1 [Brassica oleracea] (178)
| | | | \-93-+
| | | | \----- GSBRNA2T00069875001 [Brassica napus] (212)
| | |-54-+
| | | |--------------- RrC6027_p3 [Raphanus raphanistrum] (176)
| | | |
| | | \--------------- Rsa1.0_00152.1_g00034.1 [Raphanus sativus] (220)
| | |
| | \-------------------- Tp2g12350 [Thellungiella parvula] (131)
| |
| \------------------------- XP_010538453.1 [Tarenaya hassleriana] (280)
|
| /----- Gh_A11G1381 [Gossypium hirsutum] (3)
| |
| |----- Cotton_A_03704_BGI-A2_v1.0 [Gossypium arboreum] (47)
| /-100+
| | |----- Gorai.007G166100.1 [Gossypium raimondii] (128)
| | |
| /---100---+ \----- Gh_D11G1522 [Gossypium hirsutum] (169)
| | |
| | \---------- Thecc1EG002410t1 [Theobroma cacao] (193)
| |
| | /----- Gh_D07G1944 [Gossypium hirsutum] (40)
|---------100--------+ /-89-+
| | | \----- Gorai.001G222300.1 [Gossypium raimondii] (110)
| | /-74-+
| | | \---------- Cotton_A_32061_BGI-A2_v1.0 [Gossypium arboreum] (154)
| \-100+
| \--------------- Gh_A07G1738 [Gossypium hirsutum] (46)
|
| /----- Cotton_A_02119_BGI-A2_v1.0 [Gossypium arboreum] (6)
| /-97-+
| | \----- Gh_A13G1122 [Gossypium hirsutum] (16)
| /-100+
| | | /----- Gorai.013G153100.1 [Gossypium raimondii] (183)
| | \-90-+
| /-92-+ \----- Gh_D13G1393 [Gossypium hirsutum] (260)
| | |
| | \--------------- Thecc1EG030648t1 [Theobroma cacao] (171)
| |
| /-97-+ /----- Gh_D01G0731 [Gossypium hirsutum] (8)
| | | |
| | | |----- Cotton_A_06526_BGI-A2_v1.0 [Gossypium arboreum] (35)
| | \------100-----+
| | |----- Gh_A01G0712 [Gossypium hirsutum] (177)
|-------54------+ |
| | \----- Gorai.002G099900.1 [Gossypium raimondii] (226)
| |
| |------------------------- evm.model.supercontig_12.151 [Carica papaya] (63)
| |
| \------------------------- Eucgr.F02051.1.p [Eucalyptus grandis] (135)
|
|----------------------------------------- evm.model.supercontig_196.1 [Carica papaya] (7)
|
| /---------- XP_009115140.1 [Brassica rapa] (9)
| |
| | /----- XP_013639202.1 [Brassica oleracea] (27)
| /-81-+-64-+
| | | \----- GSBRNA2T00018200001 [Brassica napus] (166)
| | |
| | \---------- GSBRNA2T00010034001 [Brassica napus] (34)
| |
| /---------56---------+ /----- Rsa1.0_01245.1_g00005.1 [Raphanus sativus] (110)
| | | /-96-+
| | | | \----- RrC12404_p1 [Raphanus raphanistrum] (111)
| | | |
| | | |---------- XP_013587714.1 [Brassica oleracea] (192)
/----85---+ | \-79-+
| | | |---------- GSBRNA2T00044690001 [Brassica napus] (197)
| | | |
| | | \---------- XP_009146189.1 [Brassica rapa] (250)
| | |
| | | /----- GSBRNA2T00123828001 [Brassica napus] (69)
| | | /-86-+
| | | | \----- XP_013622804.1 [Brassica oleracea] (189)
| |-54-+ |
| | | /-100+---------- XP_009135466.1 [Brassica rapa] (175)
| | | | |
| | | | \---------- GSBRNA2T00137554001 [Brassica napus] (181)
| | | /-66-+
| | | | | /----- Rsa1.0_00545.1_g00014.1 [Raphanus sativus] (222)
| | | | \---100---+
| | | /-66-+ \----- RrC59920_p1 [Raphanus raphanistrum] (229)
| | | | |
| | | | | /----- 676784470 [Sisymbrium irio] (157)
| | | /-64-+ \------58------+
| | | | | \----- Tp3g14280 [Thellungiella parvula] (168)
| | | | |
| | \--59-+ \------------------------- Thhalv10021578m [Eutrema salsugineum] (155)
| | |
| | \------------------------------ AA398G00002 [Aethionema arabicum] (225)
| |
| | /---------- Araha.1122s0014.1.p [Arabidopsis halleri] (20)
| | |
| | /-99-+ /----- 493452 [Arabidopsis lyrata] (114)
| | | \-89-+
| | | \----- AT4G14540.1 [Arabidopsis thaliana] (211)
| | |
| | | /----- Carubv10006827m [Capsella rubella] (81)
| |-----------100-----------+ /-100+
| | | | \----- Cagra.1718s0015.1.p [Capsella grandiflora] (130)
| | | |
| | | |---------- Bostr.0597s0066.1.p [Boechera stricta] (98)
| | | |
| | \-59-+---------- Csa12g057280.1 [Camelina sativa] (121)
| | |
| | |---------- Csa10g031970.1 [Camelina sativa] (187)
| | |
| | \---------- Csa11g038610.1 [Camelina sativa] (217)
| |
| |----------------------------------------- Neem_354_f_2 [Azadirachta indica] (21)
| |
| | /----- XP_010532973.1 [Tarenaya hassleriana] (30)
| |-----------------51----------------+
| | \----- XP_010557716.1 [Tarenaya hassleriana] (138)
| |
| | /----- orange1.1g036580m [Citrus sinensis] (71)
| |-----------------99----------------+
| | \----- Ciclev10009623m [Citrus clementina] (122)
| |
| |----------------------------------------- RrC3475_p4 [Raphanus raphanistrum] (74)
| |
| | /---------- Neem_797_f_1 [Azadirachta indica] (90)
| | |
| | /-50-+ /----- Eucgr.L00153.1.p [Eucalyptus grandis] (146)
| | | \-100+
| |------------65-----------+ \----- EcS532174.10 [Eucalyptus camaldulensis] (159)
/-69-+ | |
| | | \--------------- Thecc1EG030438t1 [Theobroma cacao] (126)
| | |
| | |----------------------------------------- KFK32404.1 [Arabis alpina] (120)
| | |
| | |----------------------------------------- Rsa1.0_00741.1_g00004.1 [Raphanus sativus] (137)
| | |
| | \----------------------------------------- evm.model.supercontig_136.31 [Carica papaya] (185)
| |
| | /----- RrC7464_p1 [Raphanus raphanistrum] (17)
| | /---100---+
| | | \----- Rsa1.0_00954.1_g00002.1 [Raphanus sativus] (213)
| | |
| | | /----- XP_013612461.1 [Brassica oleracea] (48)
| | /-----------100-----------+ |
| | | | /-93-+----- XP_009112239.1 [Brassica rapa] (66)
| | | | | |
| | | \-100+ \----- GSBRNA2T00063695001 [Brassica napus] (89)
| | | |
| | | \---------- GSBRNA2T00135034001 [Brassica napus] (152)
| | |
| | | /----- Csa01g036280.1 [Camelina sativa] (19)
| | | /-98-+
| | | | \----- Csa19g043340.1 [Camelina sativa] (99)
| | | /-73-+
| | | | | /----- Csa15g066860.1 [Camelina sativa] (43)
| | | | \-82-+
| | | /-53-+ \----- Csa15g065860.1 [Camelina sativa] (172)
| | | | |
| | | /-100+ \--------------- Cagra.2412s0002.1.p [Capsella grandiflora] (124)
| | | | |
| | | | \-------------------- Carubv10016473m [Capsella rubella] (79)
| | | /-99-+
| | | | | /----- 899587 [Arabidopsis lyrata] (87)
| | | | | |
| | | | \---------96--------+----- Araha.29463s0001.1.p [Arabidopsis halleri] (113)
| | | /-100-+ |
| | | | | \----- AT2G13570.1 [Arabidopsis thaliana] (218)
| | /-81-+ | |
| | | |-100+ \------------------------------ Bostr.13083s0037.1.p [Boechera stricta] (33)
| | | | |
| | | | | /----- AA322G00001 [Aethionema arabicum] (112)
| | | | \--------------100-------------+
| | | | \----- XP_010527095.1 [Tarenaya hassleriana] (186)
| | | |
| | | | /---------- XP_013627354.1 [Brassica oleracea] (65)
| | | | |
| | | | /-88-+ /----- Rsa1.0_00713.1_g00008.1 [Raphanus sativus] (96)
| | | | | \-99-+
| | | | | \----- RrC4944_p4 [Raphanus raphanistrum] (158)
| | | | |
| | | |------------94-----------+ /----- XP_009136216.1 [Brassica rapa] (73)
| | | | | /-100+
| | | | | | \----- GSBRNA2T00155032001 [Brassica napus] (76)
| | | | \-100+
| | | | \---------- GSBRNA2T00149966001 [Brassica napus] (230)
| | | |
| | | | /----- 676767456 [Sisymbrium irio] (85)
| | | |-----------------73----------------+
| \-85-+ | \----- Tp3g26980 [Thellungiella parvula] (136)
| | |
| | \----------------------------------------- Thhalv10022845m [Eutrema salsugineum] (223)
| |
| | /------------------------- Neem_5905_f_1 [Azadirachta indica] (39)
| | |
| | | /----- Gorai.007G066100.1 [Gossypium raimondii] (56)
| | | /-86-+
| | | | \----- Gh_A11G0532 [Gossypium hirsutum] (191)
| | | /-100+
| | | | \---------- Gh_D11G0616 [Gossypium hirsutum] (93)
| | | |
| | | | /---------- Gorai.006G005400.1 [Gossypium raimondii] (57)
| | /-57-+ | |
| | | | | |---------- Gh_D09G0041 [Gossypium hirsutum] (156)
| | | | |-100+
| | | | /-80-+ | /----- Gh_A09G0043 [Gossypium hirsutum] (184)
| | | | | | \-100+
| | | | | | \----- Cotton_A_29111_BGI-A2_v1.0 [Gossypium arboreum] (216)
| | | | | |
| | | | | |--------------- Thecc1EG001531t1 [Theobroma cacao] (170)
| \-------82------+ \-78-+ |
| | | \--------------- evm.TU.contig_41265.1 [Carica papaya] (210)
| | |
| | | /----- Ciclev10003558m [Citrus clementina] (167)
| | \------96------+
| | \----- orange1.1g047516m [Citrus sinensis] (270)
| |
| \------------------------------ Eucgr.I00185.1.p [Eucalyptus grandis] (143)
|
| /----- GSBRNA2T00008339001 [Brassica napus] (5)
| /-96-+
| | \----- XP_013634509.1 [Brassica oleracea] (22)
| /-77-+
| | | /----- GSBRNA2T00133043001 [Brassica napus] (117)
| | \-92-+
| /-100+ \----- XP_009142500.1 [Brassica rapa] (160)
| | |
| | \--------------- RrC20063_p1 [Raphanus raphanistrum] (14)
| |
| | /----- Cagra.0551s0036.1.p [Capsella grandiflora] (12)
| |------100-----+
| | \----- Carubv10025377m [Capsella rubella] (145)
| |
| |-------------------- AA21G00538 [Aethionema arabicum] (15)
| |
| | /----- Csa04g067900.1 [Camelina sativa] (25)
| | /-100+
/-66-+ | | \----- Csa06g054340.1 [Camelina sativa] (190)
| | |---100---+
| | | \---------- Csa05g001360.1 [Camelina sativa] (37)
| | |
| | | /----- GSBRNA2T00138879001 [Brassica napus] (28)
| | | /-100+
| | | | \----- XP_009133828.1 [Brassica rapa] (161)
| | /-56-+----58---+
| | | | \---------- XP_013626976.1 [Brassica oleracea] (84)
| | | |
| | | | /----- AT2G47810.1 [Arabidopsis thaliana] (50)
| | | | /-91-+
| | | | | \----- 483964 [Arabidopsis lyrata] (129)
| | | |---100---+
| | | | \---------- Araha.26260s0002.1.p [Arabidopsis halleri] (62)
| | | |
| | | | /----- RrC8778_p1 [Raphanus raphanistrum] (61)
| | | |------71------+
| | /-56-+ | \----- Rsa1.0_00177.1_g00002.1 [Raphanus sativus] (80)
| | | | |
| | | | |-------------------- Thhalv10001724m [Eutrema salsugineum] (72)
| | | | |
| | | | |-------------------- 676734994 [Sisymbrium irio] (151)
| | | | |
| |------------59-----------+ | |-------------------- Bostr.13208s0037.1.p [Boechera stricta] (190)
| | | | |
| | | | \-------------------- Tp4g29730 [Thellungiella parvula] (215)
| | | |
| | | \------------------------- XP_010523933.1 [Tarenaya hassleriana] (163)
| | |
| | \------------------------------ evm.model.supercontig_9.193 [Carica papaya] (32)
| |
| | /----- Eucgr.B01299.1.p [Eucalyptus grandis] (11)
| | /-100+
| | | \----- Eucgr.B01300.1.p [Eucalyptus grandis] (221)
| | /-100+
| | | \---------- Eucgr.B01293.1.p [Eucalyptus grandis] (240)
| | /-95-+
| | | \--------------- Eucgr.B01303.1.p [Eucalyptus grandis] (41)
| |-----------------71----------------+
| | | /----- Eucgr.H03892.1.p [Eucalyptus grandis] (118)
| | \------100-----+
| | \----- EcC025257.10 [Eucalyptus camaldulensis] (196)
| |
| | /----- Gh_D02G0528 [Gossypium hirsutum] (18)
| | /-88-+
| | | \----- Gorai.005G059500.1 [Gossypium raimondii] (165)
| |---------------------100---------------------+
| | | /----- Cotton_A_04868_BGI-A2_v1.0 [Gossypium arboreum] (141)
| | \-84-+
| | \----- Gh_A02G0473 [Gossypium hirsutum] (188)
| |
| | /----- Gh_D10G1689 [Gossypium hirsutum] (23)
| | /-99-+
| | | \----- Gorai.011G189100.1 [Gossypium raimondii] (194)
| | /-100+
| | | \---------- Gh_A10G1446 [Gossypium hirsutum] (214)
| |-------------------99-------------------+
| | | /----- Cotton_A_18789_BGI-A2_v1.0 [Gossypium arboreum] (116)
| | \----89---+
| | \----- Gh_Sca156698G01 [Gossypium hirsutum] (133)
| |
| | /----- Gorai.006G263900.1 [Gossypium raimondii] (24)
| | /-100+
| | | \----- Gh_D09G2321 [Gossypium hirsutum] (174)
| | /-73-+
| | | \---------- Cotton_A_18010_BGI-A2_v1.0 [Gossypium arboreum] (53)
| |-------------------100------------------+
| | \--------------- Gh_A09G2115 [Gossypium hirsutum] (198)
| |
| | /----- orange1.1g038014m [Citrus sinensis] (26)
| | /-100+
| | | \----- Ciclev10024294m [Citrus clementina] (140)
| | /------75------+
| | | | /----- Neem_6689_f_1 [Azadirachta indica] (38)
| | | \-100+
| | | \----- Neem_30289_f_1 [Azadirachta indica] (132)
| | |
| | | /----- Gorai.004G141600.1 [Gossypium raimondii] (52)
| | | /-61-+
| |--------------59--------------+ | \----- Gh_D08G1297 [Gossypium hirsutum] (147)
| | | /---100---+
| | | | | /----- Cotton_A_22531_BGI-A2_v1.0 [Gossypium arboreum] (60)
| | | | \-91-+
--100+ | | | \----- Gh_A08G1022 [Gossypium hirsutum] (150)
| | | |
| | | | /----- Cotton_A_23317_BGI-A2_v1.0 [Gossypium arboreum] (58)
| | \-67-+ /-98-+
| | | | \----- Gh_A11G1060 [Gossypium hirsutum] (127)
| | | /-100+
| | | | | /----- Gorai.007G129900.1 [Gossypium raimondii] (68)
| | | | \-100+
| | \-64-+ \----- Gh_D11G1215 [Gossypium hirsutum] (199)
| | |
| | \--------------- Thecc1EG004576t1 [Theobroma cacao] (95)
| |
| |-------------------------------------------------------- Neem_696_f_5 [Azadirachta indica] (83)
| |
| |-------------------------------------------------------- Eucgr.H01189.1.p [Eucalyptus grandis] (119)
| |
| | /----- orange1.1g044287m [Citrus sinensis] (125)
| |------------------------100-----------------------+
| | \----- Ciclev10006769m [Citrus clementina] (195)
| |
| |-------------------------------------------------------- evm.model.supercontig_287.4 [Carica papaya] (220)
| |
| \-------------------------------------------------------- Thecc1EG021185t1 [Theobroma cacao] (228)
|
| /----- Thecc1EG026629t1 [Theobroma cacao] (31)
| /----76---+
| | \----- evm.model.supercontig_48.72 [Carica papaya] (173)
| |
| | /----- Eucgr.H04502.1.p [Eucalyptus grandis] (44)
| |----74---+
|----------------------50---------------------+ \----- Eucgr.B01940.1.p [Eucalyptus grandis] (97)
| |
| | /---------- Neem_10966_f_2 [Azadirachta indica] (51)
| | |
| \-95-+ /----- Ciclev10003157m [Citrus clementina] (54)
| \-100+
| \----- orange1.1g045194m [Citrus sinensis] (139)
|
| /----- Csa17g012530.1 [Camelina sativa] (36)
| /-100+
| | \----- Csa14g010490.1 [Camelina sativa] (75)
| |
| /-100+---------- Csa03g012440.1 [Camelina sativa] (77)
| | |
| | \---------- Csa08521s010.1 [Camelina sativa] (180)
| |
| /-87-+ /----- Cagra.4395s0089.1.p [Capsella grandiflora] (55)
| | |---100---+
| | | \----- Carubv10011185m [Capsella rubella] (162)
| | |
| /-100+ \--------------- Bostr.25219s0042.1.p [Boechera stricta] (134)
| | |
| | | /----- Araha.58155s0001.1.p [Arabidopsis halleri] (160)
| | | |
| /-91-+ \------99------+----- AT1G09030.1 [Arabidopsis thaliana] (140)
| | | |
| | | \----- 888138 [Arabidopsis lyrata] (200)
| /--76-+ |
| | | \------------------------- Thhalv10009804m [Eutrema salsugineum] (148)
| | |
| | \------------------------------ 676723770 [Sisymbrium irio] (67)
| |
| | /---------- RrC264_p1 [Raphanus raphanistrum] (88)
| | |
| | | /----- GSBRNA2T00100529001 [Brassica napus] (130)
| /-64-+ |-100+
| | |------------97-----------+ \----- XP_013585147.1 [Brassica oleracea] (153)
| | | |
| | | |---------- Rsa1.0_00690.1_g00015.1 [Raphanus sativus] (150)
| | | |
| /-93-+ | \---------- XP_009148158.1 [Brassica rapa] (219)
| | | |
| | | \------------------------------------ Tp1g07640 [Thellungiella parvula] (179)
| | |
|------91------+ \----------------------------------------- AA218G00001 [Aethionema arabicum] (120)
| |
| | /----- XP_010549755.1 [Tarenaya hassleriana] (78)
| \-------------------95-------------------+
| \----- XP_010529024.1 [Tarenaya hassleriana] (290)
|
| /----- Gh_Sca130119G01 [Gossypium hirsutum] (59)
| |
| |----- Cotton_A_22387_BGI-A2_v1.0 [Gossypium arboreum] (82)
| |
\--------------------------100--------------------------+----- Gh_D13G1867 [Gossypium hirsutum] (123)
|
|----- Gorai.013G205200.1 [Gossypium raimondii] (182)
|
\----- Gh_A13G1533 [Gossypium hirsutum] (227)
Root part of tree:
/------------------------------------------------------------------ Gh_D11G2731 [Gossypium hirsutum] (1)
|
|------------------------------------------------------------------ Gorai.007G298300.1 [Gossypium raimondii] (224)
+
| /-------------------------------------------- (378)
| |
\---------100---------+ /---------------------- Gh_A11G2413 [Gossypium hirsutum] (29)
\---------100---------+
\---------------------- Cotton_A_29306_BGI-A2_v1.0 [Gossypium arboreum] (180)
|
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