PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM4176
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Subtree rooted at node 98: /----- 906088 [Arabidopsis lyrata] (2) /-100+ | \----- Araha.17006s0008.1.p [Arabidopsis halleri] (14) /-100+ | \---------- AT3G48440.1 [Arabidopsis thaliana] (12) /-100-+ | | /----- Csa06g022230.1 [Camelina sativa] (30) | \---100---+ /-66-+ \----- Csa09g050480.1 [Camelina sativa] (41) | | | | /----- Carubv10017261m [Capsella rubella] (17) /-100+ \------100------+ | | \----- Cagra.0807s0009.1.p [Capsella grandiflora] (44) | | | \-------------------------- Bostr.18473s0106.1.p [Boechera stricta] (38) | | /----- GSBRNA2T00125334001 [Brassica napus] (4) | /-100+ | | \----- XP_009149817.1 [Brassica rapa] (20) | /-100+ /-67-+ | | /----- GSBRNA2T00068140001 [Brassica napus] (8) | | | \-97-+ | | /-100-+ \----- XP_013599555.1 [Brassica oleracea] (21) | | | | | | | | /----- Rsa1.0_03777.1_g00001.1 [Raphanus sativus] (43) | | /-93-+ \---100---+ /-100+ | | | \----- RrC357_p4 [Raphanus raphanistrum] (46) | | | | | | | \-100+ \--------------------- Tp5g13590 [Thellungiella parvula] (48) | | | /-100+ | \-------------------------- Thhalv10010405m [Eutrema salsugineum] (47) | | | | | \------------------------------------ KFK34147.1 [Arabis alpina] (56) | | | \----------------------------------------- AA96G00100 [Aethionema arabicum] (58) | | /----- Rsa1.0_01492.1_g00001.1 [Raphanus sativus] (5) | /---100---+ | | \----- RrC1841_p5 [Raphanus raphanistrum] (36) | | | /-100-+ /----- XP_009150385.1 [Brassica rapa] (15) | | | /-100+ | | | | \----- GSBRNA2T00073126001 [Brassica napus] (54) | | \-100+ | /-100+ | /----- GSBRNA2T00141565001 [Brassica napus] (39) | | | \-100+ | | | \----- XP_013628435.1 [Brassica oleracea] (42) | /-100+ | | | | \--------------------- 676739336 [Sisymbrium irio] (11) /-100-+ | | | | /-100+ \-------------------------- Tp2g26380 [Thellungiella parvula] (9) | | | | | | | \------------------------------- Thhalv10004204m [Eutrema salsugineum] (23) | | | | | | /---------- Csa11g100160.1 [Camelina sativa] (6) | | | | | | | /-100+ /----- Csa18g036800.1 [Camelina sativa] (10) | | | | \-100+ | | | | \----- Csa02g071710.1 [Camelina sativa] (51) | | | /-100-+ | | /-100+ | | /----- Carubv10028484m [Capsella rubella] (13) | | | | | \---100---+ | | | | /-100+ \----- Cagra.0248s0008.1.p [Capsella grandiflora] (57) /-100+ | | | | | | | | | | | \--------------------- Bostr.0568s0481.1.p [Boechera stricta] (45) | | | | | | | | | | | /-100+ /----- 496509 [Arabidopsis lyrata] (7) | | \-100+ | | | /-100+ | | | | | | | \----- Araha.1329s0007.1.p [Arabidopsis halleri] (53) | | | \-51-+ \------100------+ | | | | \---------- AT5G63260.2 [Arabidopsis thaliana] (49) /-85-+ | | | | | | | \------------------------------- KFK28041.1 [Arabis alpina] (50) | | | | | | | \----------------------------------------- AA4G00058 [Aethionema arabicum] (16) | | | | | \---------------------------------------------------- XP_010519530.1 [Tarenaya hassleriana] (25) --91-+ | | | /----- Eucgr.B00161.1.p [Eucalyptus grandis] (37) | \------------------------100------------------------+ | \----- EcS547846.10 [Eucalyptus camaldulensis] (40) | \-------------------------------------------------------------- evm.model.supercontig_4.50 [Carica papaya] (18) Root part of tree: /------------------------------------------------------------------- Gh_D07G0544 [Gossypium hirsutum] (1) | |------------------------------------------------------------------- Gorai.001G061800.1 [Gossypium raimondii] (55) | | /----------------------------- (98) | | | | /---------- Neem_19703_f_1 [Azadirachta indica] (3) | /---100--+ /---100--+ | | | | \---------- Neem_5849_f_3 [Azadirachta indica] (24) | | \---100---+ | /----84---+ \------------------- Ciclev10019979m [Citrus clementina] (26) | | | + | \-------------------------------------- Thecc1EG014550t1 [Theobroma cacao] (19) | | | | /---------- Gh_D12G1861 [Gossypium hirsutum] (22) | | /---100--+ | /---100--+ | \---------- Gorai.008G204400.1 [Gossypium raimondii] (27) | | | /---100---+ | | | | | /---------- Gh_A12G1698 [Gossypium hirsutum] (28) | | | | \---95---+ | | | | \---------- Cotton_A_08063_BGI-A2_v1.0 [Gossypium arboreum] (29) | | \--------99--------+ | | | /---------- Gorai.007G041600.1 [Gossypium raimondii] (32) | | | /---100--+ \----87---+ | | \---------- Gh_D11G0383 [Gossypium hirsutum] (52) | \---100---+ | | /---------- Cotton_A_01917_BGI-A2_v1.0 [Gossypium arboreum] (33) | \---71---+ | \---------- Gh_A11G0327 [Gossypium hirsutum] (34) | | /---------- Gh_A07G2280 [Gossypium hirsutum] (31) \----------------------72----------------------+ \---------- Cotton_A_32573_BGI-A2_v1.0 [Gossypium arboreum] (35) |