PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA381
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Subtree rooted at node 223: /----- XP_009792033.1 [Nicotiana sylvestris] (2) /-100+ | \----- XP_016461884.1 [Nicotiana tabacum] (152) /-70-+ | | /----- Niben101Scf18484g01002.1 [Nicotiana benthamiana] (55) | \-89-+ /------100-----+ \----- Niben101Scf04671g01011.1 [Nicotiana benthamiana] (161) | | | | /----- XP_009611997.1 [Nicotiana tomentosiformis] (82) | \---100---+ | \----- XP_016460317.1 [Nicotiana tabacum] (120) | | /----- Peinf101Scf03880g00008.1 [Petunia inflata] (4) /--------------93--------------+ /--------100--------+ | | | \----- Peaxi162Scf00098g00134.1 [Petunia axillaris] (5) | | | | | | /---------- Sopen06g030320.1 [Solanum pennellii] (12) | | | | | | | |---------- PGSC0003DMP400010525 [Solanum tuberosum] (73) | \-60-+ /-76-+ | | | | /----- Sopim06g073920.0.1 [Solanum pimpinellifolium] (91) | | | \-100+ | | /-93-+ \----- Solyc06g073920.2.1 [Solanum lycopersicum] (180) | | | | | \-93-+ \--------------- Sme2.5_03324.1_g00002.1 [Solanum melongena] (110) | | | \-------------------- CA06g22580 [Capsicum annuum] (115) | | /--------------------------------------------------- Migut.B01607.1.p [Mimulus guttatus] (3) | | | | /----- Cc00_g13830 [Coffea canephora] (6) | |---------------------100---------------------+ | | \----- cra_locus_3605_iso_3 [Catharanthus roseus] (23) | | | | /----- XP_009600360.1 [Nicotiana tomentosiformis] (8) | | /----99---+ | | | \----- XP_016492403.1 [Nicotiana tabacum] (94) | | | | | | /----- XP_009781194.1 [Nicotiana sylvestris] (17) | | | /-100+ | | /----93---+ | \----- XP_016477431.1 [Nicotiana tabacum] (25) | | | |-93-+ | | | | \---------- Niben101Scf09555g02004.1 [Nicotiana benthamiana] (42) | | | | | | | \--------------- Niben101Scf03167g02028.1 [Nicotiana benthamiana] (71) | | | | | | /----- Solyc08g079100.2.1 [Solanum lycopersicum] (56) | | /-93-+ | | | | | /-100+----- Sopen08g027560.1 [Solanum pennellii] (96) | | | | | | | | | | /-98-+ \----- Sopim08g079100.0.1 [Solanum pimpinellifolium] (113) | | | | | | | | | | /-99-+ \---------- PGSC0003DMP400008402 [Solanum tuberosum] (95) | | /--93-+ | | | | | | | \-100+ \--------------- CA01g04770 [Capsicum annuum] (122) | | | | | | | | | \-------------------- Sme2.5_06478.1_g00005.1 [Solanum melongena] (87) | | | | | | | | /----- Peaxi162Scf00002g00717.1 [Petunia axillaris] (126) | | /-68-+ \-----------100----------+ | | | | \----- Peinf101Scf00674g07017.1 [Petunia inflata] (137) | | | | | | | |------------------------------------ Cc08_g12950 [Coffea canephora] (135) | | | | | | | \------------------------------------ Itr_sc001766.1_g00011.1 [Ipomoea trifida] (158) | | /-52-+ | | | | /----- DCAR_027801 [Daucus carota] (22) | | | |-----------------82----------------+ | | | | \----- DCAR_004921 [Daucus carota] (31) | |-67-+ | | | | \----------------------------------------- Achn002711 [Actinidia chinensis] (44) | | | | | \---------------------------------------------- DCAR_008464 [Daucus carota] (64) | | | |--------------------------------------------------- DCAR_006190 [Daucus carota] (9) | | | | /----- Niben101Scf04287g04009.1 [Nicotiana benthamiana] (10) | | | | | /-100+----- XP_009799428.1 [Nicotiana sylvestris] (69) | | | | | | | \----- XP_016476192.1 [Nicotiana tabacum] (134) | | /-82-+ | | | | /----- XP_009621066.1 [Nicotiana tomentosiformis] (97) | | | \-97-+ | | /-99-+ \----- XP_016511953.1 [Nicotiana tabacum] (131) | | | | | | | \--------------- Niben101Scf09599g00012.1 [Nicotiana benthamiana] (51) | | | | | | /----- Peinf101Scf01171g02036.1 [Petunia inflata] (15) | | /-95-+ /----99---+ | | | | | \----- Peaxi162Scf00710g00529.1 [Petunia axillaris] (129) | | | | | | | | | | /----- Sopim05g005240.0.1 [Solanum pimpinellifolium] (18) | | | \-88-+ | | | | | /-100+----- Sopen05g001250.1 [Solanum pennellii] (130) | | | | | | | | | \-93-+ \----- Solyc05g005240.1.1 [Solanum lycopersicum] (140) | | | | | | | \---------- CA11g08140 [Capsicum annuum] (130) | | | | |------------84-----------+ /----- Itr_sc000880.1_g00003.1 [Ipomoea trifida] (77) | | |---------61--------+ | | | \----- DCAR_007074 [Daucus carota] (133) | | | | | | /----- Migut.L01462.1.p [Mimulus guttatus] (88) | | | /-93-+ | | | | \----- SMil_00001622-RA_Salv [Salvia miltiorrhiza] (123) | | |------95------+ | | | \---------- XP_011087090.1 [Sesamum indicum] (145) | | | | | \------------------------- Cc11_g15350 [Coffea canephora] (150) | | | |--------------------------------------------------- Migut.N02436.1.p [Mimulus guttatus] (13) | | | |--------------------------------------------------- Achn347011 [Actinidia chinensis] (14) | | | |--------------------------------------------------- EPS68946.1 [Genlisea aurea] (29) | /-50-+ --50-+ | |--------------------------------------------------- SMil_00009864-RA_Salv [Salvia miltiorrhiza] (33) | | | | | |--------------------------------------------------- EPS63061.1 [Genlisea aurea] (34) | | | | | |--------------------------------------------------- 678330512 [Utricularia gibba] (36) | | | | | |--------------------------------------------------- XP_011090281.1 [Sesamum indicum] (37) | | | | | | /----- Solyc01g091010.2.1 [Solanum lycopersicum] (38) | | | | | | | |----- PGSC0003DMP400045034 [Solanum tuberosum] (54) | | | /-100+ | | | | |----- Sopen01g036740.1 [Solanum pennellii] (127) | | | | | | | | /-93-+ \----- Sopim01g091010.0.1 [Solanum pimpinellifolium] (146) | | | | | | | |----------------100----------------+ \---------- Sme2.5_03738.1_g00001.1 [Solanum melongena] (58) | | | | | | | \--------------- CA00g67520 [Capsicum annuum] (63) | | | | | | /----- XP_016505067.1 [Nicotiana tabacum] (39) | | | /-93-+ | | | | \----- XP_009793076.1 [Nicotiana sylvestris] (59) | | | | | | | |---------- Niben101Scf03337g00001.1 [Nicotiana benthamiana] (50) | | | | | | | |---------- 678425438 [Utricularia gibba] (116) | | |-------------------50-------------------+ | | | | /----- XP_016482024.1 [Nicotiana tabacum] (124) | | | |-100+ | | | | \----- XP_009609785.1 [Nicotiana tomentosiformis] (125) | | | | | | | \---------- Niben101Scf04714g03014.1 [Nicotiana benthamiana] (136) | | | | | |--------------------------------------------------- SMil_00015812-RA_Salv [Salvia miltiorrhiza] (41) | | | | | |--------------------------------------------------- DCAR_031517 [Daucus carota] (43) | | | | | |--------------------------------------------------- DCAR_008543 [Daucus carota] (49) | | | | | |--------------------------------------------------- KZV32848.1 [Dorcoceras hygrometricum] (57) | | | | | | /----- 678457978 [Utricularia gibba] (60) | | |----------------------93---------------------+ | | | \----- 678304985 [Utricularia gibba] (66) |-50-+ | | | |--------------------------------------------------- Migut.N01619.1.p [Mimulus guttatus] (62) | | | | | |--------------------------------------------------- 678467294 [Utricularia gibba] (65) | | | | | |--------------------------------------------------- Ote100009440121 [Ocimum tenuiflorum] (67) | | | | | |--------------------------------------------------- Ote100043710021 [Ocimum tenuiflorum] (70) | | | | | |--------------------------------------------------- Ote100109850021 [Ocimum tenuiflorum] (72) | | | | | |--------------------------------------------------- XP_011088989.1 [Sesamum indicum] (74) | | | | | |--------------------------------------------------- Itr_sc000071.1_g00046.1 [Ipomoea trifida] (75) | | | | | |--------------------------------------------------- Cc01_g07860 [Coffea canephora] (78) | | | | | |--------------------------------------------------- EPS61311.1 [Genlisea aurea] (80) | | | | | |--------------------------------------------------- SMil_00012845-RA_Salv [Salvia miltiorrhiza] (81) | | | | | |--------------------------------------------------- cra_locus_46963_iso_2 [Catharanthus roseus] (85) | | | | | |--------------------------------------------------- KZV44471.1 [Dorcoceras hygrometricum] (89) | | | | | |--------------------------------------------------- Ote100103720001 [Ocimum tenuiflorum] (90) | | | | | |--------------------------------------------------- EPS57246.1 [Genlisea aurea] (99) | | | | | | /----- Peinf101Scf00645g12010.1 [Petunia inflata] (114) | | |---------------------100---------------------+ | | | \----- Peaxi162Scf00013g02410.1 [Petunia axillaris] (128) | | | | | |--------------------------------------------------- XP_011093320.1 [Sesamum indicum] (121) | | | | | |--------------------------------------------------- XP_011090395.1 [Sesamum indicum] (139) | | | | | |--------------------------------------------------- EPS57324.1 [Genlisea aurea] (144) | | | | | |--------------------------------------------------- Ote100187630141 [Ocimum tenuiflorum] (151) | | | | | |--------------------------------------------------- SMil_00004343-RA_Salv [Salvia miltiorrhiza] (156) | | | | | \--------------------------------------------------- Migut.D02379.1.p [Mimulus guttatus] (157) | | | \-------------------------------------------------------- Itr_sc001375.1_g00007.1 [Ipomoea trifida] (61) | | /----- Peaxi162Scf00717g00318.1 [Petunia axillaris] (27) | /---100---+ | | \----- Peinf101Scf00118g00003.1 [Petunia inflata] (154) | | | | /---------- Sopen11g029480.2 [Solanum pennellii] (40) | /-54-+ | | | | | /----- Sopim11g071810.0.1 [Solanum pimpinellifolium] (98) | | | |-100+ | | \-93-+ \----- Solyc11g071810.1.1 [Solanum lycopersicum] (142) | | | | | |---------- Sme2.5_03411.1_g00006.1 [Solanum melongena] (190) | | | | | \---------- PGSC0003DMP400005367 [Solanum tuberosum] (132) \-------------------63-------------------+ | /----- XP_016503299.1 [Nicotiana tabacum] (28) | /-74-+ | | \----- XP_009798278.1 [Nicotiana sylvestris] (141) | /-93-+ | | \---------- Niben101Scf30065g00001.1 [Nicotiana benthamiana] (110) | | | | /----- XP_016437684.1 [Nicotiana tabacum] (112) \-84-+----77---+ | \----- XP_009626437.1 [Nicotiana tomentosiformis] (149) | \--------------- Niben101Scf00970g00003.1 [Nicotiana benthamiana] (159) Root part of tree: /------------------------------------------------------------------ XP_011078402.1 [Sesamum indicum] (1) | |------------------------------------------------------------------ Migut.K00443.1.p [Mimulus guttatus] (83) | | /------- (223) | | | /------------------50------------------+------- cra_locus_87588_iso_1 [Catharanthus roseus] (11) | | | | | \------- DCAR_012254 [Daucus carota] (53) | | | | /------- Achn032281 [Actinidia chinensis] (7) | | /-100-+ | | | \------- Achn169341 [Actinidia chinensis] (45) | | /--50--+ | | | \------------- cra_locus_21461_iso_2 [Catharanthus roseus] (79) | | | | | | /------------- Niben101Scf10688g04007.1 [Nicotiana benthamiana] (21) | | | | | | | | /------- XP_016446776.1 [Nicotiana tabacum] (68) | | | |--95-+ | | | | \------- XP_009622268.1 [Nicotiana tomentosiformis] (155) | | |--82--+ | | | |------------- Niben101Scf02838g04006.1 [Nicotiana benthamiana] (84) | | | | | | | | /------- XP_016457963.1 [Nicotiana tabacum] (93) | | /---------50--------+ \-100-+ | | | | \------- XP_009785258.1 [Nicotiana sylvestris] (153) | | | | | | | | /------- Sopim07g008180.0.1 [Solanum pimpinellifolium] (30) | | | | | | | | | |------- Sopen07g004060.1 [Solanum pennellii] (32) | | | |-----86-----+ | | | | |------- PGSC0003DMP400053832 [Solanum tuberosum] (47) | | | | | | | | | \------- Solyc07g008180.2.1 [Solanum lycopersicum] (76) | | | | | | | \-------------------- CA07g04270 [Capsicum annuum] (46) | | | + | | /------- Peaxi162Scf00046g00823.1 [Petunia axillaris] (20) | | | /-100-+ | | | | \------- Peinf101Scf02030g00008.1 [Petunia inflata] (147) | /--51--+ |------------84------------+ | | | | \------------- Achn383981 [Actinidia chinensis] (35) | | | | | | | | /------- Peinf101Scf00350g00009.1 [Petunia inflata] (24) | | | | /-----------100-----------+ | | | | | \------- Peaxi162Scf00313g00092.1 [Petunia axillaris] (170) | | | | | | | | | | /------- XP_016489012.1 [Nicotiana tabacum] (48) | | | | | /-----100----+ | | |--50-+ | | \------- XP_009607227.1 [Nicotiana tomentosiformis] (163) | | | | | | | | | |--99--+ /--93-+ /------- Niben101Scf03737g01002.1 [Nicotiana benthamiana] (52) | | | | | | | /--93-+ | | | | | | | | \------- Niben101Scf02112g02009.1 [Nicotiana benthamiana] (100) | | | | | | \--95--+ | | | | | | | /------- XP_009762052.1 [Nicotiana sylvestris] (111) | | | | | | \-100-+ | | | | \--93--+ \------- XP_016452662.1 [Nicotiana tabacum] (148) | | | | | | | | | | /-------------------- PGSC0003DMP400005200 [Solanum tuberosum] (92) | /--85-+ | | | | | | | | | | | /------- Sopim12g009580.0.1 [Solanum pimpinellifolium] (117) | | | | | \-100-+ /-100-+ | | | | | | | \------- Solyc12g009580.1.1 [Solanum lycopersicum] (143) | | | | | \--100-+ | | | | | \------------- Sopen12g004560.1 [Solanum pennellii] (118) | | | | | | | | | | /------- Cc06_g08310 [Coffea canephora] (26) | | | | |---------------86---------------+ | | | | | \------- cra_locus_8025_iso_3 [Catharanthus roseus] (86) | | | | | | | | | |---------------------------------------- Itr_sc000068.1_g00001.1 [Ipomoea trifida] (160) | | | | | | | | | \---------------------------------------- Itr_sc000717.1_g00004.1 [Ipomoea trifida] (162) \--61--+ | | | | \---------------------------------------------- DCAR_014892 [Daucus carota] (140) | | | | /------------- SMil_00012607-RA_Salv [Salvia miltiorrhiza] (19) | | | | \-------------------59------------------+ /------- Ote100010730081 [Ocimum tenuiflorum] (120) | \-100-+ | \------- Ote100181850011 [Ocimum tenuiflorum] (150) | | /------- Ote100030700021 [Ocimum tenuiflorum] (16) | /-100-+ | | \------- Ote100030700031 [Ocimum tenuiflorum] (119) | /--100-+ | | \------------- SMil_00026183-RA_Salv [Salvia miltiorrhiza] (138) \------------------84------------------+ \-------------------- KZV18878.1 [Dorcoceras hygrometricum] (160) |