PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP2900
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Subtree rooted at node 137: /----- Pavir.2NG086600.1.p [Panicum virgatum] (3) /-100+ | \----- Pavir.5NG052700.1.p [Panicum virgatum] (62) /-100+ | \---------- Pavir.5KG049600.1.p [Panicum virgatum] (31) /-100-+ | \--------------- Pahal.E04322.1 [Panicum hallii] (70) | /-100+ /----- Seita.5G138900.1.p [Setaria italica] (28) | | /-100+ | | | \----- Sevir.5G136900.1.p [Setaria viridis] (38) | \----100---+ /-100+ \---------- Do028210.1 [Dichanthelium oligosanthes] (33) | | | | /---------- GRMZM2G333582_P01 [Zea mays] (36) | | | | \------100------+ /----- Sobic.003G031100.1.p [Sorghum bicolor] (66) | \-100+ | \----- GRMZM2G397755_P01 [Zea mays] (82) | | /--------------- Zmw_sc04080.1.g00070.1 [Zoysia matrella] (5) | | | | /----- Zmw_sc00291.1.g00090.1 [Zoysia matrella] (25) /---------100--------+ /-100-+ /-100+ | | | | | \----- Zpz_sc01828.1.g00140.1.am.mk [Zoysia pacifica] (67) | | | \-99-+ | | | \---------- Zjn_sc00011.1.g07570.1.sm.mk [Zoysia japonica] (56) | | /-99-+ | | | | /--------------- Oropetium_20150105_22978A [Oropetium thomaeum] (13) | | | | | | | | | | /----- Zmw_sc00060.1.g00540.1 [Zoysia matrella] (53) | | | \-100-+ /-100+ | | | | | \----- Zpz_sc01822.1.g00090.1.sm.mk [Zoysia pacifica] (77) | \-100+ \-100+ | | | /----- Zjn_sc00005.1.g03230.1.am.mk [Zoysia japonica] (80) | | \-100+ | | \----- Zmw_sc00175.1.g00060.1 [Zoysia matrella] (81) | | | \-------------------------- 462893346 [Eragrostis tef] (30) | | /---------- LOC_Os01g09900.1 [Oryza sativa japonica] (4) | | | |---------- BGIOSGA002940-PA [Oryza sativa indica] (27) | | | | /----- ORGLA01G0397100.1 [Oryza glaberrima] (29) | /-74-+ | | | |-100+----- OGLUM01G06690.1 [Oryza glumaepatula] (61) | | | | | | | \----- OBART01G06120.1 [Oryza barthii] (75) /-100+ /--64-+ | | | | | \---------- ONIVA01G07080.1 [Oryza nivara] (55) | | | | | | /--------100--------+ \--------------- OMERI01G06280.1 [Oryza meridionalis] (65) | | | | | | | \--------------------- ORUFI01G06700.1 [Oryza rufipogon] (39) | | | | | | /----- OMERI01G06290.1 [Oryza meridionalis] (9) | | | /-77-+ | | | | \----- OGLUM01G06710.1 [Oryza glumaepatula] (64) | | | /-76-+ | | | | | /----- BGIOSGA002941-PA [Oryza sativa indica] (10) | | | | \-100+ | | /-100+ /---------100--------+ \----- ONIVA01G07090.1 [Oryza nivara] (43) | | | | | | | | | | | \--------------- LOC_Os01g09930.1 [Oryza sativa japonica] (50) | | | | | | | | | | /--------------------- LOC_Os01g09990.1 [Oryza sativa japonica] (11) | | | | | | | | | | | |--------------------- BGIOSGA002943-PA [Oryza sativa indica] (16) | | | | | | /-99-+ | | | | | /----- ORGLA01G0058200.1 [Oryza glaberrima] (17) | | | | | | | /-100+ | | | | \-100+ | | \----- ORGLA08G0199700.1 [Oryza glaberrima] (22) | | | | | /-100+ /-100+ | | | | | | | | \---------- OBART01G06170.1 [Oryza barthii] (76) | | \-100-+ | | |--91-+ | | | | | | \--------------- OGLUM01G06730.1 [Oryza glumaepatula] (35) | | | | | | | | | | /-100+ |--------------------- ONIVA01G07190.1 [Oryza nivara] (24) | | | | | | | | | | | | | \--------------------- ORUFI01G06710.1 [Oryza rufipogon] (54) | | | \-100+ | | | | | \-------------------------- OPUNC01G05940.1 [Oryza punctata] (14) | | | | | | | \------------------------------- OMERI01G06310.1 [Oryza meridionalis] (71) --92-+ | | | | | /----- LPERR01G05820.1 [Leersia perrieri] (20) | | \-------------------86-------------------+ | | \----- OB01G16120.1 [Oryza brachyantha] (63) | | | \--------------------------------------------------------- PH01001571G0100 [Phyllostachys heterocycla] (48) | | /----- Brast01G352200.1.p [Brachypodium stacei] (6) | /-----------100-----------+ | | \----- Bradi2g05950.2.p [Brachypodium distachyon] (58) | | | | /----- TRAES3BF075700010CFD_t1 [Triticum aestivum] (8) | | /-55-+ | | | \----- TRAES3BF076600020CFD_t1 [Triticum aestivum] (40) | | /-99-+ \--------------92--------------+ | \---------- Traes_3B_99CDB9674.1 [Triticum aestivum] (74) | /--80-+ | | \--------------- EMT03037 [Aegilops tauschii] (60) | /-100+ | | | /----- Traes_3AS_037375C84.1 [Triticum aestivum] (18) | | \------100------+ \-100+ \----- TRIUR3_35423-P1 [Triticum urartu] (73) | \-------------------------- MLOC_21524.1 [Hordeum vulgare] (41) Subtree rooted at node 150: /---------- OBART05G06380.1 [Oryza barthii] (2) | |---------- ORUFI05G06870.1 [Oryza rufipogon] (19) | /-51-+ /----- ORGLA05G0058200.1 [Oryza glaberrima] (23) | |-97-+ | | \----- LOC_Os05g11070.1 [Oryza sativa japonica] (78) | | /--97-+ \---------- OGLUM05G06690.1 [Oryza glumaepatula] (46) | | | | /----- BGIOSGA033976-PA [Oryza sativa indica] (32) /-100+ \---100---+ | | \----- ONIVA05G07120.1 [Oryza nivara] (44) | | /-100+ \--------------------- OPUNC05G05910.1 [Oryza punctata] (15) | | /-100+ \-------------------------- OB05G15870.1 [Oryza brachyantha] (34) | | /-100+ \------------------------------- LPERR05G05410.1 [Leersia perrieri] (52) | | | \------------------------------------ PH01000045G2030 [Phyllostachys heterocycla] (49) | /-100+ /----- (137) | | /-100+ | | | \----- Zosma40g00280.1 [Zostera marina] (47) | \--------------100-------------+ | | /----- GRMZM2G132550_P01 [Zea mays] (37) | \-100+ /-100-+ \----- Sobic.009G073800.2.p [Sorghum bicolor] (51) | | | | /---------- Oropetium_20150105_03191A [Oropetium thomaeum] (7) | | | | | /-51-+ /----- Zpz_sc00094.1.g00070.1.am.mk [Zoysia pacifica] (12) | | | \-100+ /-91-+ \--------------100-------------+ \----- Zmw_sc00085.1.g00050.1 [Zoysia matrella] (59) | | | | | \--------------- 462868147 [Eragrostis tef] (57) | | | | /----- Sobic.009G073500.1.p [Sorghum bicolor] (45) | \----------------------97----------------------+ /-100+ \----- GRMZM2G175480_P01 [Zea mays] (68) | | | | /----- Seita.3G113200.1.p [Setaria italica] (21) | |------------------------100------------------------+ --100+ | \----- Sevir.3G115700.1.p [Setaria viridis] (72) | | | \--------------------------------------------------------- Do020041.1 [Dichanthelium oligosanthes] (42) | \-------------------------------------------------------------- Pahal.C01624.1 [Panicum hallii] (26) Root part of tree: /------------------------------------------------------------------- Pavir.3KG198600.1.p [Panicum virgatum] (1) | |------------------------------------------------------------------- Pavir.3KG197300.1.p [Panicum virgatum] (69) + | /--------------------------------- (150) \---------------100---------------+ \--------------------------------- Pavir.9NG627700.1.p [Panicum virgatum] (79) |