PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP1882
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Subtree rooted at node 168: /---------- Traes_3B_934488D20.1 [Triticum aestivum] (2) | /-100+ /----- TRAES3BF012300030CFD_t1 [Triticum aestivum] (80) | \-93-+ /-100+ \----- TRAES3BF012200030CFD_t1 [Triticum aestivum] (90) | | /-98-+ \--------------- Traes_3AL_152A7186A.1 [Triticum aestivum] (97) | | | \-------------------- MLOC_14401.1 [Hordeum vulgare] (70) | /-100+ /----- TRAES3BF012200020CFD_t1 [Triticum aestivum] (29) | | /-99-+ | | | \----- EMT27928 [Aegilops tauschii] (81) /----100---+ \------62------+ | | \---------- TRAES3BF012200010CFD_t1 [Triticum aestivum] (83) | | | \------------------------------ TRAES3BF080800010CFD_t1 [Triticum aestivum] (19) | | /----- Pavir.5KG646700.1.p [Panicum virgatum] (10) | /-98-+ | | \----- Pavir.5KG651000.1.p [Panicum virgatum] (17) | /-100+ | | \---------- Pahal.E00891.1 [Panicum hallii] (110) | /-100+ | | | /----- Seita.5G386900.1.p [Setaria italica] (43) | | \---100---+ /-66-+ /------100------+ \----- Sevir.5G392000.1.p [Setaria viridis] (95) | | | | | | | | /----- Sobic.007G055300.2.p [Sorghum bicolor] (44) | | | \------100-----+ | | | \----- GRMZM2G150680_P01 [Zea mays] (51) | | | | | | /----- 462861517 [Eragrostis tef] (11) | | | /-99-+ | | | | \----- 462874329 [Eragrostis tef] (48) | | | /------100-----+ | | | | \---------- 462893644 [Eragrostis tef] (28) | | | | | \-100+ | /----- Zpz_sc00875.1.g00270.1.sm.mk [Zoysia pacifica] (35) | | | /-99-+ | | | | \----- Zmw_sc00501.1.g00320.1 [Zoysia matrella] (54) | | | /-60-+ | | /-67-+ | \---------- Zmw_sc06420.1.g00010.1 [Zoysia matrella] (88) | | | | /-100+ | | | | | \--------------- Zjn_sc00040.1.g05800.1.sm.mk [Zoysia japonica] (40) | | | | | | | | | | /----- Zjn_sc00797.1.g00010.1.sm.mk [Zoysia japonica] (50) | | | | | /-100+ | | | \-100+ | \----- Zmw_sc02013.1.g00060.1 [Zoysia matrella] (52) | | | | | | \-100-+ | /-99-+---------- Zjn_sc00009.1.g06130.1.sm.mk [Zoysia japonica] (53) | | | | | | | | | \---------- Zmw_sc02013.1.g00070.1 [Zoysia matrella] (92) | | \-100+ | | | /----- Zpz_sc00145.1.g00010.1.am.mk [Zoysia pacifica] (63) | | \----99---+ | | \----- Zmw_sc02245.1.g00030.1 [Zoysia matrella] (76) /-74-+ | | | \------------------------------ Oropetium_20150105_12834A [Oropetium thomaeum] (49) | | | | /--------------- Oropetium_20150105_08389A [Oropetium thomaeum] (4) | | | | | /-55-+ /---------- Zmw_sc00472.1.g00110.1 [Zoysia matrella] (37) | | | | | | | | \-100+ /----- Zjn_sc00065.1.g01580.1.am.mk [Zoysia japonica] (57) | | | \-99-+ | | /---100---+ \----- Zpz_sc00092.1.g00240.1.am.mk [Zoysia pacifica] (91) | | | | | | | | /----- 462884366 [Eragrostis tef] (84) | | | \------100-----+ | | | \----- 462904302 [Eragrostis tef] (93) | | | | | | /----- Pavir.9NG189800.1.p [Panicum virgatum] (21) | | | /-100+ | | | | \----- Pavir.9KG076000.1.p [Panicum virgatum] (60) | | /-100-+ /-100+ | | | | | \---------- Pahal.I02466.1 [Panicum hallii] (64) | | | | /-61-+ | | | | | | /----- Seita.9G160300.1.p [Setaria italica] (78) | | | | | \---100---+ | | | | /-100+ \----- Sevir.9G158600.1.p [Setaria viridis] (98) | | | | | | | | | | | \-------------------- Do024632.1 [Dichanthelium oligosanthes] (99) | | | \-74-+ | | | | /----- Sobic.001G158600.2.p [Sorghum bicolor] (38) | | | \--------100--------+ | | | \----- GRMZM2G121570_P01 [Zea mays] (72) | \----86---+ | | /----- TRIUR3_11880-P1 [Triticum urartu] (8) | | /-98-+ /-57-+ | | \----- TRIUR3_28918-P1 [Triticum urartu] (73) | | | /-83-+ | | | | | /----- EMT04762 [Aegilops tauschii] (20) | | | | \-100+ | | | /---100---+ \----- EMT28014 [Aegilops tauschii] (77) | | | | | | | | | \--------------- TRIUR3_28165-P1 [Triticum urartu] (32) | | | | | | | | /----- Bradi2g35463.1.p [Brachypodium distachyon] (13) | | \----97----+ /------100-----+ | | | | \----- Brast08G201600.1.p [Brachypodium stacei] (65) | | | | | | | | /----- Brast08G201900.1.p [Brachypodium stacei] (26) | | \-100+ /-100+ | | | | \----- Brast08G201800.1.p [Brachypodium stacei] (75) | | | /-78-+ | | | | \---------- Brast08G202000.1.p [Brachypodium stacei] (89) | | \-78-+ | | \--------------- Brast08G201700.1.p [Brachypodium stacei] (56) | | | | /----- PDK_30s65509650g007 [Phoenix dactylifera] (5) | | /-100+ | | | \----- XP_010923245.1 [Elaeis guineensis] (42) | | | | | /-98-+---------- GSMUA_Achr6P33700_001 [Musa acuminata] (39) | | | | | |----------------100----------------+ \---------- GSMUA_Achr10P00770_001 [Musa acuminata] (66) /-98-+ | | | | | \--------------- GSMUA_Achr8P02290_001 [Musa acuminata] (61) | | | | | | /----- Brast05G015400.1.p [Brachypodium stacei] (27) | | | /-99-+ | | | | \----- Brast01G085200.1.p [Brachypodium stacei] (33) | | \-------------------100------------------+ | | \---------- Bradi2g55303.1.p [Brachypodium distachyon] (86) | | | |-------------------------------------------------------- Oropetium_20150105_25498A [Oropetium thomaeum] (6) | | | | /----- ONIVA01G42540.1 [Oryza nivara] (18) | | | | | /-99-+----- BGIOSGA004824-PA [Oryza sativa indica] (25) | | | | | | | \----- ORUFI01G41050.1 [Oryza rufipogon] (79) --87-+ | | | | |---------- LOC_Os01g63680.1 [Oryza sativa japonica] (22) | | /-100+ | | | |---------- KN538690.1_FGP120 [Oryza longistaminata] (58) | | | | | | | | /----- OBART01G37720.1 [Oryza barthii] (59) | | /-100+ \-99-+ | | | | \----- ORGLA01G0315200.1 [Oryza glaberrima] (68) | | | | | | /-67-+ \--------------- OPUNC01G36560.1 [Oryza punctata] (34) | | | | | \--------------100-------------+ \-------------------- OB01G46450.1 [Oryza brachyantha] (62) | | | \------------------------- LPERR01G32380.1 [Leersia perrieri] (74) | | /----- LPERR07G06330.1 [Leersia perrieri] (24) \--------------------------100--------------------------+ \----- LPERR07G06890.1 [Leersia perrieri] (87) Root part of tree: /------------------------------------------------------------------ ORUFI07G07450.1 [Oryza rufipogon] (1) | |------------------------------------------------------------------ OBART07G07440.1 [Oryza barthii] (36) | | /----------- (168) | | | /----------98---------+ /----- OB07G15500.1 [Oryza brachyantha] (15) | | \-100-+ | | \----- OB07G17380.1 [Oryza brachyantha] (100) | | | | /----- KN540497.1_FGP002 [Oryza longistaminata] (12) | | /-------56-------+ | | | \----- OGLUM07G07150.1 [Oryza glumaepatula] (45) | | | | /-------68------+ | /----------- ONIVA07G05990.1 [Oryza nivara] (14) | | | | | | | | /-99-+ /-55-+ /----- ORUFI07G07460.1 [Oryza rufipogon] (46) | | | | | | \--63-+ | | | | | | \----- OBART07G07450.1 [Oryza barthii] (85) | | | | | | | | | | \--55-+ /----- LOC_Os07g12130.1 [Oryza sativa japonica] (41) | | \--99-+ | /--83-+ + | | | | \----- BGIOSGA024590-PA [Oryza sativa indica] (71) | | | \-74-+ | | | \----------- ORGLA07G0062800.1 [Oryza glaberrima] (69) | | | | | \--------------------------- OPUNC07G07180.1 [Oryza punctata] (31) | | | /-100-+ /-------------------------------------- KN538948.1_FGP011 [Oryza longistaminata] (3) | | | | | | | | /----- BGIOSGA025449-PA [Oryza sativa indica] (9) | | | | /--73-+ | | | | | \----- OBART07G08680.1 [Oryza barthii] (16) | | | | /-50-+ | | | | | \----------- OGLUM07G07870.1 [Oryza glumaepatula] (96) | | | /-100-+ /-100-+ | | | | | | \---------------- LOC_Os07g14110.1 [Oryza sativa japonica] (55) | | | | | /-99-+ | /-100+ | | | | \---------------------- ORGLA07G0073600.1 [Oryza glaberrima] (82) | | | | | | /-100-+ | | | | | | | | /----- ORUFI07G08780.1 [Oryza rufipogon] (30) | | | \-100+ | | \---------100---------+ | | | | \-61-+ \----- ONIVA07G07540.1 [Oryza nivara] (94) | | | | | \-100-+ | | \--------------------------------- OMERI07G07070.1 [Oryza meridionalis] (23) | | | | | \-------------------------------------------- OPUNC07G08180.1 [Oryza punctata] (7) | | | \------------------------------------------------------- OPUNC07G07160.1 [Oryza punctata] (47) | \------------------------------------------------------------ ONIVA07G05980.1 [Oryza nivara] (67) |