PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP1044
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Subtree rooted at node 237: /----- Zmw_sc00068.1.g00270.1 [Zoysia matrella] (2) /---100---+ | \----- Zmw_sc00258.1.g00230.1 [Zoysia matrella] (117) | /-100+ /---------- Zjn_sc00006.1.g07170.1.sm.mkhc [Zoysia japonica] (18) | | | | \-100+ /----- Zpz_sc00218.1.g00220.1.sm.mkhc [Zoysia pacifica] (89) /-------94------+ \-99-+ | | \----- Zpz_sc01896.1.g00060.1.sm.mkhc [Zoysia pacifica] (95) | | | \-------------------- Oropetium_20150105_08972A [Oropetium thomaeum] (67) | | /----- Seita.7G045300.1.p [Setaria italica] (19) | /---100---+ | | \----- Sevir.7G050400.1.p [Setaria viridis] (66) | | | /-98-+ /----- Pavir.7KG065200.1.p [Panicum virgatum] (31) | | | /-100+ /-92-+ | | | \----- Pavir.7NG041200.1.p [Panicum virgatum] (37) | | /-92-+ \-100+ | | | | \---------- Pahal.G01712.1 [Panicum hallii] (55) | | | | | | /-97-+ \-------------------- Do023424.1 [Dichanthelium oligosanthes] (111) | | | | | | | | /----- GRMZM2G042895_P01 [Zea mays] (57) | | | \---------93--------+ | | | \----- Sobic.007G051800.1.p [Sorghum bicolor] (90) | | | | | | /----- Pavir.7KG065100.1.p [Panicum virgatum] (36) | \--88-+ /-100+ | | | \----- Pavir.7NG041300.1.p [Panicum virgatum] (74) | | /-91-+ | | | \---------- Pahal.G01710.1 [Panicum hallii] (80) | | | | | | /----- Seita.7G045200.1.p [Setaria italica] (64) | \------87------+---100---+ /-57-+ | \----- Sevir.7G050300.1.p [Setaria viridis] (69) | | | | | | /----- GRMZM2G119823_P01 [Zea mays] (65) | | \----76---+ | | \----- Do009523.1 [Dichanthelium oligosanthes] (116) | | | | /------------------------- KN538860.1_FGP008 [Oryza longistaminata] (11) | | | | | | /-------------------- OPUNC04G05630.1 [Oryza punctata] (15) | | | | | | /-66-+ | /----- LOC_Os04g23550.1 [Oryza sativa japonica] (22) | | | | | | | | | | | |----- ORUFI04G07860.1 [Oryza rufipogon] (25) | | | | | /-99-+ | | | \-61-+ | |----- ONIVA01G07170.1 [Oryza nivara] (120) | | | | | | | | | | /-94-+ \----- BGIOSGA040642-PA [Oryza sativa indica] (120) | | | | | | | \----97----+ | | | /----- OBART04G06880.1 [Oryza barthii] (49) | | \-85-+ \-100+ | | | \----- OGLUM04G06620.1 [Oryza glumaepatula] (99) | | | /-82-+ | \--------------- OMERI03G04020.1 [Oryza meridionalis] (46) | | | | | |------------------------------ OB10G13050.1 [Oryza brachyantha] (23) | | | | | \------------------------------ LPERR04G04520.1 [Leersia perrieri] (87) | | | | /----- Bradi5g05110.1.p [Brachypodium distachyon] (10) | | /--------100--------+ | | | \----- Brast09G043400.1.p [Brachypodium stacei] (124) | | | | | | /---------- MLOC_62844.1 [Hordeum vulgare] (44) | | | | | |---------100--------+ /-78-+ /----- EMT28703 [Aegilops tauschii] (92) | | | | \-85-+ | | | /-68-+ \----- Traes_2DL_DE3909A32.1 [Triticum aestivum] (114) | | | | | | | \-100+ \--------------- Traes_2BL_8FED05903.1 [Triticum aestivum] (91) | | | | | \-------------------- Traes_2AL_411B944D6.1 [Triticum aestivum] (85) | | | | /---------- PH01000179G0630 [Phyllostachys heterocycla] (59) | | | | \-----------------58----------------+ /----- PH01002972G0240 [Phyllostachys heterocycla] (130) | \-100+ | \----- PH01002972G0210 [Phyllostachys heterocycla] (170) | /-82-+ /----- Sevir.1G157000.1.p [Setaria viridis] (4) | | /-100+ | | | \----- Seita.1G155800.1.p [Setaria italica] (81) | | /-95-+ | | | \---------- Do027932.1 [Dichanthelium oligosanthes] (26) | | | | | /-99-+ /----- Pavir.1NG169100.1.p [Panicum virgatum] (32) | | | | /-73-+ | | | | | \----- Pavir.1KG248100.1.p [Panicum virgatum] (62) | | /-99-+ \-100+ | | | | \---------- Pahal.A01509.1 [Panicum hallii] (71) | | | | | | | \-------------------- Sobic.004G140000.1.p [Sorghum bicolor] (126) | | | | | | /----- 462892139 [Eragrostis tef] (21) | | /-84-+ /------100-----+ | | | | | \----- 462892761 [Eragrostis tef] (150) | | | | | | | | | | /----- Zjn_sc00020.1.g03690.1.sm.mkhc [Zoysia japonica] (29) | | | | | /-100+ | | | \-84-+ | \----- Zmw_sc04480.1.g00020.1 [Zoysia matrella] (63) | | | | /-100+ | | | | | | /----- Zmw_sc02915.1.g00060.1 [Zoysia matrella] (83) | | | | | \-93-+ | | | \-78-+ \----- Zpz_sc00321.1.g00020.1.sm.mkhc [Zoysia pacifica] (140) | \---------79---------+ | | | \--------------- Oropetium_20150105_11155A [Oropetium thomaeum] (48) | | | | /----- Traes_3DL_564FE4223.1 [Triticum aestivum] (8) | | /-100+ | | | \----- EMT26157 [Aegilops tauschii] (53) | |--------100--------+ | | \---------- EMT26156 [Aegilops tauschii] (123) | | | \------------------------------ PH01004728G0030 [Phyllostachys heterocycla] (58) | | /---------- Zpz_sc00218.1.g00160.1.am.mk [Zoysia pacifica] (3) | | | /-100+ /----- Zmw_sc00258.1.g00190.1 [Zoysia matrella] (17) | | \-67-+ | | \----- Zpz_sc04044.1.g00010.1.am.mk [Zoysia pacifica] (72) | /-100+ | | | /----- Zjn_sc00006.1.g07210.1.sm.mk [Zoysia japonica] (41) | | \---100---+ | | \----- Zmw_sc00068.1.g00240.1 [Zoysia matrella] (130) | /-100+ | | | /----- Zpz_sc02398.1.g00040.1.am.mk [Zoysia pacifica] (34) | | | /-66-+ | | | | \----- Zmw_sc01622.1.g00090.1 [Zoysia matrella] (100) | | \---100---+ | /-90-+ | /----- Zmw_sc01491.1.g00150.1 [Zoysia matrella] (50) | | | \-100+ | | | \----- Zpz_sc00551.1.g00160.1.am.mk [Zoysia pacifica] (98) | | | | | \------------------------- 462948995 [Eragrostis tef] (43) | | | /--55-+ /----- Seita.7G045100.1.p [Setaria italica] (12) | | | /------100-----+ | | | | \----- Sevir.7G050200.1.p [Setaria viridis] (96) | | | | | | | | /---------- Pahal.G01706.1 [Panicum hallii] (45) | | \---100---+ | | | | /-100+ /----- Pavir.7KG064900.1.p [Panicum virgatum] (94) | | | | \-100+ | | \-56-+ \----- Pavir.7NG042100.1.p [Panicum virgatum] (133) | | | |---------58--------+ \--------------- Do025022.1 [Dichanthelium oligosanthes] (180) | | | | /----- Seita.7G044900.1.p [Setaria italica] (24) | | /-100+ | | | \----- Sevir.7G049900.1.p [Setaria viridis] (131) | | | /-76-+ | | /----- Pahal.G01704.1 [Panicum hallii] (39) | | | /-100+-100+ | | | | | \----- Pavir.7KG064000.1.p [Panicum virgatum] (127) | | | | | | | \---------95---------+ \---------- Do025298.1 [Dichanthelium oligosanthes] (113) | | | | | | /----- GRMZM2G042893_P05 [Zea mays] (88) | | \----57---+ | | \----- Do029831.1 [Dichanthelium oligosanthes] (112) | | | | /--------------- EMT19490 [Aegilops tauschii] (5) | | | | | | /----- Traes_5AL_331CE753D.1 [Triticum aestivum] (56) | | /-85-+ /-100+ | | | | | \----- TRIUR3_16896-P1 [Triticum urartu] (77) | | | \-51-+ | | /-100+ \---------- Traes_4DL_55503B3CD.1 [Triticum aestivum] (68) | | | | | | /-97-+ \-------------------- MLOC_13653.1 [Hordeum vulgare] (42) | | | | | | | \------------------------- Traes_5AL_EDF2DD187.1 [Triticum aestivum] (6) | | | | | | /---------- TRAES3BF060400040CFD_t1 [Triticum aestivum] (54) | | | | | | /--98-+ /-100+ /----- TRIUR3_12568-P1 [Triticum urartu] (79) | | | | | \-100+ | | | | | \----- TRAES3BF201400030CFD_t1 [Triticum aestivum] (125) | | | | /-59-+ | | | | | | /----- EMT13581 [Aegilops tauschii] (110) | | | | | \---100---+ | | | \---100---+ \----- Traes_3DS_81B8AB548.1 [Triticum aestivum] (129) | | | | | | /-97-+ \-------------------- MLOC_43888.2 [Hordeum vulgare] (110) | | | | | | | | /----- Traes_2DL_8BE259F4B.1 [Triticum aestivum] (27) | | | | /-63-+ | | | | | \----- MLOC_44850.2 [Hordeum vulgare] (93) | | | | /-100+ --77-+ | /-90-+ | | \---------- EMT06747 [Aegilops tauschii] (60) | | | | \---------100--------+ | | | | \--------------- Traes_2BL_070D9E2AD.2 [Triticum aestivum] (82) | | | | | |----84---+ | /----- Bradi5g01900.1.p [Brachypodium distachyon] (7) | | | \-----------------99----------------+ | | | \----- Brast09G016600.1.p [Brachypodium stacei] (119) | | | | | \---------------------------------------------- PH01000179G0720 [Phyllostachys heterocycla] (132) | | | | /--------------- OMERI03G04040.1 [Oryza meridionalis] (28) | | | | | | /----- ONIVA01G07150.1 [Oryza nivara] (52) | | /-88-+ /-99-+ | | | | | \----- BGIOSGA015389-PA [Oryza sativa indica] (84) | | | \-98-+ | | | \---------- ORUFI04G07840.2 [Oryza rufipogon] (121) | | | | | /-99-+ /----- LOC_Os04g23440.1 [Oryza sativa japonica] (35) | | | |------99------+ | | | | \----- ORGLA04G0051300.1 [Oryza glaberrima] (115) | | /-99-+ | | | | | \-------------------- OBART04G06800.2 [Oryza barthii] (76) | | | | | | /--99-+ \------------------------- OGLUM04G06590.1 [Oryza glumaepatula] (118) | | | | | | /-98-+ \------------------------------ OPUNC04G05620.1 [Oryza punctata] (38) | | | | | | | \------------------------------------ KN541806.1_FGP002 [Oryza longistaminata] (70) | |------99------+ | | | /----- OB04G15330.1 [Oryza brachyantha] (40) | | \-----------------63----------------+ | | \----- LPERR04G04510.1 [Leersia perrieri] (122) | | | \-------------------------------------------------------- Spipo28G0022400 [Spirodela polyrhiza] (128) | | /----- Aco031432.1 [Ananas comosus] (47) \--------------------------100--------------------------+ \----- Aco029228.1 [Ananas comosus] (190) Root part of tree: /------------------------------------------------------------------ XP_010928971.1 [Elaeis guineensis] (1) | |------------------------------------------------------------------ PDK_30s804031g001 [Phoenix dactylifera] (61) | | /---------------------------------------- (237) | | | | /------------- GSMUA_Achr9P22980_001 [Musa acuminata] (9) | | /-----93-----+ | | | \------------- GSMUA_Achr4P12700_001 [Musa acuminata] (97) | |------80-----+ | | \-------------------------- Zosma86g00080.1 [Zostera marina] (51) | | + | /------------- GSMUA_Achr7P16000_001 [Musa acuminata] (13) | | /-----100----+ | | | \------------- GSMUA_Achr10P23370_001 [Musa acuminata] (75) | |------99-----+ | /-----84-----+ \-------------------------- GSMUA_Achr6P30900_001 [Musa acuminata] (16) | | | | | |---------------------------------------- Aco012193.1 [Ananas comosus] (14) | | | | | | /------------- XP_010929340.1 [Elaeis guineensis] (20) | | | /-----100----+ | | | | \------------- PDK_30s969931g006 [Phoenix dactylifera] (33) | | |------95-----+ \-----84-----+ | | /------------- PDK_30s691361g001 [Phoenix dactylifera] (30) | | \-----97-----+ | | \------------- XP_010927251.1 [Elaeis guineensis] (86) | | | \---------------------------------------- PEQU_18104 [Phalaenopsis equestris] (78) | | /------------- PDK_30s704581g001 [Phoenix dactylifera] (73) \-------------------93------------------+ \------------- XP_010913729.1 [Elaeis guineensis] (160) |