PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_5AL_331CE753D.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 120aa MW: 13479.2 Da PI: 4.6384 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.2 | 1.1e-11 | 62 | 108 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ ++Er RR+ +N+++ Lr+++P+ +K++Ka+i + A+ YI +Lq Traes_5AL_331CE753D.1 62 KNIINERHRRRMLNEKLYALRRVVPNI-----TKMDKASIIQDAIAYIEELQ 108 57799*********************7.....7******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.212 | 58 | 107 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.7E-15 | 60 | 115 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.94E-11 | 61 | 112 | No hit | No description |
Pfam | PF00010 | 2.1E-9 | 62 | 108 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.6E-13 | 64 | 113 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.6E-13 | 65 | 113 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence Send to blast |
MASSDMDVSL DFSWEALVLE LGDADSMHLP AEDSLSGLCD DLTSSPDGAT SRSTKASSLE 60 RKNIINERHR RRMLNEKLYA LRRVVPNITK MDKASIIQDA IAYIEELQEQ ERQILAALRT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK365195 | 1e-129 | AK365195.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2031O06. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020177098.1 | 7e-75 | transcription factor bHLH35-like isoform X2 | ||||
Swissprot | Q2HIV9 | 1e-25 | BH035_ARATH; Transcription factor bHLH35 | ||||
TrEMBL | A0A3B6KRS7 | 7e-81 | A0A3B6KRS7_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A446TQB1 | 6e-81 | A0A446TQB1_TRITD; Uncharacterized protein | ||||
TrEMBL | A0A446TQB6 | 7e-81 | A0A446TQB6_TRITD; Uncharacterized protein | ||||
STRING | Traes_5AL_331CE753D.1 | 3e-82 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1044 | 38 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 4e-23 | bHLH family protein |
Publications ? help Back to Top | |||
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