PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2954
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Subtree rooted at node 104: /----- Araha.3974s0023.1.p [Arabidopsis halleri] (2) /-100+ | \----- 913945 [Arabidopsis lyrata] (44) /------100------+ | \---------- AT4G26170.1 [Arabidopsis thaliana] (47) | | /----- Csa12g025890.1 [Camelina sativa] (10) | /-96-+ | | \----- Csa11g018210.1 [Camelina sativa] (28) /-100+ /-100+ | | | \---------- Csa10g016730.1 [Camelina sativa] (16) | | /-100-+ | | | | /----- Cagra.0684s0047.1.p [Capsella grandiflora] (19) | | | \---100---+ /-61-+ \-100+ \----- Carubv10004909m [Capsella rubella] (53) | | | | | \--------------------- Bostr.7867s0437.1.p [Boechera stricta] (31) | | | \------------------------------- Thhalv10025245m [Eutrema salsugineum] (40) | /-98-+ /------------------------------- KFK29125.1 [Arabis alpina] (3) | | | | | | /--------------------- 676745906 [Sisymbrium irio] (4) | | | | | | | | /----- GSBRNA2T00074775001 [Brassica napus] (29) | \-82-+ | /-100+ | | /-100+ | \----- XP_009144808.1 [Brassica rapa] (49) | | | | /-100+ /-72-+ | | | | | /----- GSBRNA2T00157480001 [Brassica napus] (48) | | | | | | \-100+ | | \-100+ \-100-+ \----- XP_013625967.1 [Brassica oleracea] (51) | | | | | | | \--------------- Rsa1.0_00102.1_g00022.1 [Raphanus sativus] (43) /--68-+ | | | | | \-------------------------- Tp7g24190 [Thellungiella parvula] (46) | | | | | \----------------------------------------- AA81G00050 [Aethionema arabicum] (25) | | | \---------------------------------------------- Bostr.30275s0303.1.p [Boechera stricta] (56) | | /----- Ciclev10008074m [Citrus clementina] (5) | /---100---+ | | \----- orange1.1g040614m [Citrus sinensis] (17) | | | /-100-+ /----- Ciclev10010615m [Citrus clementina] (20) | | | /-100+ | | | | \----- orange1.1g043508m [Citrus sinensis] (41) | /----96---+ \-51-+ | | | \---------- Neem_15962_f_1 [Azadirachta indica] (45) | | | /-99-+ | \--------------------- Neem_3041_f_1 [Azadirachta indica] (32) | | | | | | /----- Gh_A08G2185 [Gossypium hirsutum] (11) | | | /-------55------+ | | /-100+ | \----- Cotton_A_14549_BGI-A2_v1.0 [Gossypium arboreum] (50) | | | | | | | | | /-99-+ /--------------- Gh_A08G2184 [Gossypium hirsutum] (23) | | | | | | | | | | | | \--55-+ /---------- Gh_D08G2550 [Gossypium hirsutum] (35) | | | | | | | | | /-99-+ \-100+ \-100+ /----- Gorai.N024000.1 [Gossypium raimondii] (39) /-100+ | | | | \-100+ | | | | | | \----- Cotton_A_14550_BGI-A2_v1.0 [Gossypium arboreum] (57) | | | | | | | | | /-70-+ | \-------------------------- Thecc1EG037691t1 [Theobroma cacao] (33) | | | | | | | | | | | \------------------------------------ Eucgr.C00913.1.p [Eucalyptus grandis] (14) | | \--91-+ | --100+ | | \----------------------------------------- evm.model.supercontig_7.238 [Carica papaya] (15) | | | | | \---------------------------------------------- evm.model.supercontig_7.239 [Carica papaya] (36) | | | \--------------------------------------------------------- XP_010539392.1 [Tarenaya hassleriana] (30) | | /----- AA102G00071 [Aethionema arabicum] (12) \---------------------------100--------------------------+ \----- AA44G00703 [Aethionema arabicum] (60) Root part of tree: /------------------------------------------------------------------- Bostr.26833s0584.1.p [Boechera stricta] (1) | | /------ Csa18g029680.1 [Camelina sativa] (7) | /-79-+ | | \------ Csa02g060070.1 [Camelina sativa] (22) | /-100-+ | | \----------- Csa11g090220.1 [Camelina sativa] (21) |-----------------------100-----------------------+ | | /------ Carubv10026317m [Capsella rubella] (27) | \----100---+ | \------ Cagra.4138s0011.1.p [Capsella grandiflora] (59) | | /-------------------------------------------------- (104) | | | | /------ Rsa1.0_19652.1_g00002.1 [Raphanus sativus] (6) | | /-100+ | | | \------ Rsa1.0_15656.1_g00002.1 [Raphanus sativus] (9) | | /-100-+ | | | \----------- RrC9466_p2 [Raphanus raphanistrum] (13) | | | | | /-100+ /------ XP_009120188.1 [Brassica rapa] (18) | | | | /-100+ + | | | | \------ GSBRNA2T00052818001 [Brassica napus] (26) | | | \-100-+ | | | | /------ XP_013607087.1 [Brassica oleracea] (37) | | | \-100+ | | | \------ GSBRNA2T00053013001 [Brassica napus] (54) | /-100-+ /-100-+ | | | | | /------ Rsa1.0_43324.1_g00001.1 [Raphanus sativus] (34) | | | | | /-100+ | | | | | | \------ Rsa1.0_31285.1_g00001.1 [Raphanus sativus] (62) | | | | | /-100-+ | | | | | | \----------- XP_009142679.1 [Brassica rapa] (38) | | | /-59-+ \-100+ | | | | | | /------ XP_013614732.1 [Brassica oleracea] (58) | | | | | \----100---+ | | | | | \------ GSBRNA2T00074031001 [Brassica napus] (63) | /-100+ | /-100-+ | | | | | | | \---------------------------- 676726196 [Sisymbrium irio] (61) | | | | | | | | | | /-100-+ \--------------------------------- Tp6g18520 [Thellungiella parvula] (52) | | | | | | | | | \-95-+ \--------------------------------------- KFK27240.1 [Arabis alpina] (8) \-100-+ | | | | \--------------------------------------------- Thhalv10015325m [Eutrema salsugineum] (55) | | | \-------------------------------------------------------- 918835 [Arabidopsis lyrata] (42) | \------------------------------------------------------------- AT5G56780.1 [Arabidopsis thaliana] (24) |