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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_7.238 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
HRT-like |
Protein Properties |
Length: 340aa MW: 37960.4 Da PI: 9.5714 |
Description |
HRT-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_7.238 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HRT-like | 56.4 | 4.9e-18 | 273 | 303 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31
+CGv+l+dG+ C+ +Pv gRKRCeeHKG++i
evm.model.supercontig_7.238 273 TCGVLLSDGTSCTLPPVLGRKRCEEHKGRKI 303
7***************************997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MGADEFSLLA PRLKREDYKR TKHDTCFSKW KVLVGANDWE DYCKGKEGVG RYRVYNLPNK 60 SCPGVYELGI AVAHSGLERD VVKFAPDDIV VTYLGQAEDV RSRLQRYGRS GAHLASIYTT 120 SNPIHSQSDS SPRGSGLFEE IFSRGCSVVF RWAPMKSKKE AEETEAKLLD TFDYAWNKGS 180 NVIRRPDEIL KKLDEIASST GRFSSLYRIF VPLTQKKVGI KIKGDKLLLQ KNKVSADADE 240 ESNNFLSGVI KFSRSRPQLV SGKRETDVTP SNTCGVLLSD GTSCTLPPVL GRKRCEEHKG 300 RKIYGYSFKL ITEGKSPSSP DLCMNQALFM AKIPMLYVV*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator involved in the regulation of cell differentiation in meristems. Probably regulates the expression of various KNAT genes involved in the maintenance of the cells in an undifferentiated, merismastic state. Plays a role in the regulation of gibberellin 20 oxidase and the gibberellin-regulated protein GASA4. Localizes in the nucleus during the cellular differentiation state and may act via a single strand cutting domain (PubMed:17991462). Transcriptional regulator required for the induction of dormancy during late seed development. Interacts genetically with FUS3 and may be component of the same regulatory pathway during embryogenesis. Binds both linear and supercoiled DNA without sequence preference (PubMed:22226340). {ECO:0000269|PubMed:17991462, ECO:0000269|PubMed:22226340}. |