PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1660
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 119: /----- Csa04g050130.1 [Camelina sativa] (4) /-83-+ | \----- Csa05g017440.1 [Camelina sativa] (81) /--------------------85-------------------+ | \---------- Csa06g039230.1 [Camelina sativa] (74) | | /------------------------------------ KFK36538.1 [Arabis alpina] (8) | | | | /------------------------------- Thhalv10017567m [Eutrema salsugineum] (16) | | | | | | /----- GSBRNA2T00053887001 [Brassica napus] (21) | /-63-+ | /-100+ | | | | | \----- XP_013635691.1 [Brassica oleracea] (82) | | | | /-100+ | | | | | | /----- XP_009143572.1 [Brassica rapa] (38) | | \-100+ | \-100+ | | | /-100-+ \----- GSBRNA2T00117057001 [Brassica napus] (85) | | | | | | | | | | /----- Rsa1.0_02254.1_g00003.1 [Raphanus sativus] (83) /-87-+ | | /-93-+ \---100---+ | | /-56-+ | | | \----- RrC1_p11 [Raphanus raphanistrum] (87) | | | | | | | | | | | \-61-+ \--------------------- 676788000 [Sisymbrium irio] (49) | | | | | | | | | \-------------------------- Tp4g18890 [Thellungiella parvula] (63) | | | | | |--56-+ | /---------- Araha.5004s0010.1.p [Arabidopsis halleri] (51) | | | | | | | | \--------------98--------------+ /----- AT2G36610.1 [Arabidopsis thaliana] (56) /-100+ | | \-76-+ | | | | \----- 870000 [Arabidopsis lyrata] (77) | | | | | | | \---------------------------------------------- Bostr.23794s0432.1.p [Boechera stricta] (13) | | | | | | /----- Cagra.0228s0052.1.p [Capsella grandiflora] (20) --100+ | \----------------------98----------------------+ | | \----- Carubv10024148m [Capsella rubella] (55) | | | \--------------------------------------------------------- AA60G00132 [Aethionema arabicum] (22) | \-------------------------------------------------------------- XP_010558970.1 [Tarenaya hassleriana] (29) Root part of tree: /------------------------------------------------------------------- RrC267_p3 [Raphanus raphanistrum] (1) | |------------------------------------------------------------------- Rsa1.0_01663.1_g00005.1 [Raphanus sativus] (18) | | /----- Gh_A01G1802 [Gossypium hirsutum] (2) | /-100+ | | \----- Cotton_A_00505_BGI-A2_v1.0 [Gossypium arboreum] (88) | /----100---+ | | \---------- Gorai.002G244200.1 [Gossypium raimondii] (41) | | | | /----- Cotton_A_00507_BGI-A2_v1.0 [Gossypium arboreum] (5) | /-100+ /-100+ | | | | \----- Gh_A01G1801 [Gossypium hirsutum] (75) | | | /-100+ | | | | \---------- Gorai.002G244000.1 [Gossypium raimondii] (46) | /-99-+ \-100-+ | | | \--------------- Gh_D01G2042 [Gossypium hirsutum] (58) | | | | | \-------------------------- Thecc1EG022391t1 [Theobroma cacao] (50) | | | | /----- orange1.1g040769m [Citrus sinensis] (6) | | /-100+ | /-55-+ | \----- Ciclev10012525m [Citrus clementina] (44) | | |---------100--------+ | | | | /----- Neem_35923_f_1 [Azadirachta indica] (31) | | | \-100+ | | | \----- Neem_13445_f_1 [Azadirachta indica] (35) | /-100+ | | | | | /----- Eucgr.A01575.1.p [Eucalyptus grandis] (25) | | | \-----------100-----------+ | | | \----- EcC000178.10 [Eucalyptus camaldulensis] (61) | /-100+ | | | | \------------------------------------ evm.model.supercontig_5.106 [Carica papaya] (30) | | | | /--99-+ \----------------------------------------- (119) | | | | /-54-+ \---------------------------------------------- XP_010558215.1 [Tarenaya hassleriana] (68) | | | | | \---------------------------------------------------- AA19G00212 [Aethionema arabicum] (10) | | | | /----- Cagra.0154s0024.1.p [Capsella grandiflora] (3) | | /-100+ | | | \----- Carubv10002831m [Capsella rubella] (76) | | /-100+ | | | \---------- Bostr.2128s0069.1.p [Boechera stricta] (62) | | /----100---+ | | | \--------------- 860781 [Arabidopsis lyrata] (47) | | | | | | /---------- Csa13g003870.1 [Camelina sativa] (11) | | | | | | /------100-----+ /-100+ /----- Csa08g060680.1 [Camelina sativa] (42) | | | | | \-99-+ | | | | /--64-+ \----- Csa20g003950.1 [Camelina sativa] (66) + | | | | | | | | \-100+ \--------------- Carubv10003464m [Capsella rubella] (86) | | | | | | | \--------------------- Cagra.0463s0004.1.p [Capsella grandiflora] (43) | | | | |------100------+ /------------------------------------ Thhalv10015784m [Eutrema salsugineum] (14) | | | | | | | | /----- GSBRNA2T00074017001 [Brassica napus] (17) | | | | /-100+ | | | | | \----- XP_013608549.1 [Brassica oleracea] (24) | | | | /-100+ | | | | | \---------- GSBRNA2T00136429001 [Brassica napus] (19) | | | | /-100-+ | | \-100+ | | /----- RrC2237_p3 [Raphanus raphanistrum] (67) | | | | \---100---+ | | | /-100+ \----- Rsa1.0_00335.1_g00021.1 [Raphanus sativus] (71) | | | | | | | | /-61-+ \--------------------- 676718002 [Sisymbrium irio] (84) | | | | | | | | | \-------------------------- Tp6g38930 [Thellungiella parvula] (65) | | \-100+ | | | /----- Rsa1.0_05735.1_g00002.1 [Raphanus sativus] (26) | | \-----------100-----------+ | | \----- RrC17403_p1 [Raphanus raphanistrum] (28) | | | | /--------------- GSBRNA2T00010767001 [Brassica napus] (7) | | | | | | /----- GSBRNA2T00136430001 [Brassica napus] (33) | /-95-+ | /-99-+ | | | /-100-+ | \----- GSBRNA2T00032256001 [Brassica napus] (53) | | | | |-100+ | | | | | \---------- XP_009122668.1 [Brassica rapa] (45) | | | | | | | | /-100+ \--------------- XP_013610664.1 [Brassica oleracea] (36) | | | | | | | | | | /----- RrC2237_p4 [Raphanus raphanistrum] (60) | | |--------------99--------------+ \------100------+ | | | | \----- Rsa1.0_00335.1_g00022.1 [Raphanus sativus] (79) | | | | | | | \-------------------------- 676717998 [Sisymbrium irio] (48) | | | | | | /------------------------------- KFK24840.1 [Arabis alpina] (9) | | | | | | | | /--------------- Bostr.2128s0071.1.p [Boechera stricta] (34) | | | | | | | | | | /----- Csa13g003850.1 [Camelina sativa] (37) | | | | /--89-+ /-100+ | | | | | | | \----- Csa20g003940.1 [Camelina sativa] (70) | | |------------76-----------+ | \-100+ | | | | /-100+ \---------- Csa08g060700.1 [Camelina sativa] (54) | | | | | | | | | | | | /----- Carubv10002440m [Capsella rubella] (73) | | | | | \------100------+ \-100+ | | | \----- Cagra.0154s0025.1.p [Capsella grandiflora] (78) | | \-100+ | | | /----- Araha.52435s0002.1.p [Arabidopsis halleri] (39) | | | /-99-+ | | | | \----- 325029 [Arabidopsis lyrata] (57) | | \-------99------+ | | \---------- AT5G03790.1 [Arabidopsis thaliana] (80) | | | | /--------------------- Tp6g38940 [Thellungiella parvula] (12) | | | | | | /----- Rsa1.0_05557.1_g00003.1 [Raphanus sativus] (15) | |-----------------67----------------+ /---100---+ | | | | \----- RrC8299_p1 [Raphanus raphanistrum] (32) | | | | | | \-100-+ /----- XP_009125517.1 [Brassica rapa] (59) | | | /-97-+ | | | | \----- GSBRNA2T00119617001 [Brassica napus] (64) | | \-100+ | | \---------- XP_013619786.1 [Brassica oleracea] (72) | | | \--------------------------------------------------------- Thhalv10014547m [Eutrema salsugineum] (27) | | /----- XP_013627901.1 [Brassica oleracea] (23) | | | |----- GSBRNA2T00049301001 [Brassica napus] (40) \---------------------------97---------------------------+ |----- XP_009130780.1 [Brassica rapa] (52) | \----- GSBRNA2T00134287001 [Brassica napus] (69) |