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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM1141
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 172:
/---------- Gorai.010G203800.1 [Gossypium raimondii] (2)
|
|---------- Gh_D06G1825 [Gossypium hirsutum] (6)
/------100-----+
| | /----- Cotton_A_26179_BGI-A2_v1.0 [Gossypium arboreum] (9)
| \-99-+
| \----- Gh_A06G1941 [Gossypium hirsutum] (62)
|
| /----- Cotton_A_29937_BGI-A2_v1.0 [Gossypium arboreum] (8)
/-100+ /---100---+
| | | \----- Gh_A05G3659 [Gossypium hirsutum] (89)
| | |
| | /-100+ /----- Gh_D04G1971 [Gossypium hirsutum] (12)
| | | | /-98-+
| | | | | \----- Gh_D04G0807 [Gossypium hirsutum] (79)
/--60-+ \-93-+ \-100+
| | | \---------- Gorai.012G094200.1 [Gossypium raimondii] (41)
| | |
| | \-------------------- Thecc1EG043081t1 [Theobroma cacao] (63)
| |
| \------------------------------ evm.model.supercontig_53.26 [Carica papaya] (13)
|
| /----- orange1.1g026556m [Citrus sinensis] (7)
/-55-+ /---100---+
| | | \----- Ciclev10033956m [Citrus clementina] (37)
| | |
| | /-66-+ /---------- Ciclev10032782m [Citrus clementina] (85)
| | | | |
| | | \-100+ /----- Ciclev10006694m [Citrus clementina] (97)
| | | \-100+
| | | \----- orange1.1g047804m [Citrus sinensis] (120)
| \-------51------+
| | /----- Eucgr.J01123.1.p [Eucalyptus grandis] (23)
/-71-+ | /-100+
| | | | \----- EcC047406.40 [Eucalyptus camaldulensis] (66)
| | \----78---+
| | \---------- Neem_11875_f_4 [Azadirachta indica] (60)
| |
| | /----- Ciclev10032772m [Citrus clementina] (45)
| | /-100+
| | | \----- orange1.1g045080m [Citrus sinensis] (83)
| | /-95-+
| | | \---------- Neem_11875_f_3 [Azadirachta indica] (80)
| \------------53-----------+
| \--------------- EcC064765.10 [Eucalyptus camaldulensis] (93)
|
| /----- Ciclev10029283m [Citrus clementina] (10)
| /-100+
| | \----- orange1.1g047491m [Citrus sinensis] (19)
| |
| | /----- Neem_21486_f_1 [Azadirachta indica] (54)
|-----------------54----------------+-100+
| | \----- Neem_9985_f_1 [Azadirachta indica] (76)
| |
| \---------- evm.TU.contig_40341.1 [Carica papaya] (100)
|
| /----- Gh_D08G0122 [Gossypium hirsutum] (17)
| /-95-+
| | \----- Gorai.004G012800.1 [Gossypium raimondii] (68)
| /-100+
| | | /----- Gh_A08G0081 [Gossypium hirsutum] (67)
| | \-99-+
| /-95-+ \----- Cotton_A_11954_BGI-A2_v1.0 [Gossypium arboreum] (78)
| | |
/-99-+ | \--------------- Thecc1EG041094t1 [Theobroma cacao] (50)
| | |
| | /-95-+ /----- Gh_A13G0015 [Gossypium hirsutum] (18)
| | | | /-100+
| | | | | \----- Cotton_A_20528_BGI-A2_v1.0 [Gossypium arboreum] (99)
| | | \---100---+
| | | | /----- Gorai.013G002900.1 [Gossypium raimondii] (57)
| | | \-100+
| | /-90-+ \----- Gh_D13G0031 [Gossypium hirsutum] (88)
| | | |
| | | | /----- Gh_A07G1059 [Gossypium hirsutum] (42)
| | | | /-93-+
| | | | | \----- Cotton_A_13320_BGI-A2_v1.0 [Gossypium arboreum] (95)
| | | \------100-----+
| | | | /----- Gorai.001G129700.1 [Gossypium raimondii] (51)
| |-------92------+ \-100+
/-60-+ | | \----- Gh_D07G1151 [Gossypium hirsutum] (94)
| | | |
| | | | /----- Gh_D09G1008 [Gossypium hirsutum] (31)
| | | | /-100+
| | | | | \----- Gorai.006G120900.1 [Gossypium raimondii] (75)
| | | | |
| | | \--------100--------+---------- Cotton_A_01732_BGI-A2_v1.0 [Gossypium arboreum] (32)
| | | |
| | | \---------- Gh_A09G0988 [Gossypium hirsutum] (110)
| | |
/-99-+ | | /----- EcC003387.10 [Eucalyptus camaldulensis] (25)
| | | |-------------------100------------------+
| | | | \----- EcS720455.10 [Eucalyptus camaldulensis] (140)
| | | |
| | | \---------------------------------------------- Eucgr.B02465.1.p [Eucalyptus grandis] (52)
| | |
| | \--------------------------------------------------- XP_010521775.1 [Tarenaya hassleriana] (27)
| |
| | /----- XP_010542601.1 [Tarenaya hassleriana] (39)
| \------------------------100-----------------------+
| \----- XP_010557308.1 [Tarenaya hassleriana] (150)
|
| /----- Carubv10010390m [Capsella rubella] (3)
| /---100---+
| | \----- Cagra.1671s0410.1.p [Capsella grandiflora] (58)
| |
| /-82-+ /----- Csa03g011350.1 [Camelina sativa] (38)
| | | /-96-+
| | | | \----- Csa14g009330.1 [Camelina sativa] (86)
| /-89-+ \-100+
--97-+ | | \---------- Csa17g011330.1 [Camelina sativa] (61)
| | |
| | \-------------------- Bostr.25219s0157.1.p [Boechera stricta] (65)
| /---------99---------+
| | | /---------- AT1G07900.1 [Arabidopsis thaliana] (26)
| | | |
| | \------100-----+ /----- 311843 [Arabidopsis lyrata] (33)
| | \-100+
| | \----- Araha.22931s0001.1.p [Arabidopsis halleri] (90)
| |
| | /----- Rsa1.0_00832.1_g00013.1 [Raphanus sativus] (5)
| | /----99---+
| | | \----- RrC41_p5 [Raphanus raphanistrum] (15)
| | |
| | /------100-----+ /----- GSBRNA2T00156289001 [Brassica napus] (22)
| | | | /-97-+
| | | | | \----- XP_009148039.1 [Brassica rapa] (35)
| | | \-100+
| | | | /----- GSBRNA2T00100652001 [Brassica napus] (34)
\------100-----+ | \-100+
| | \----- XP_013584488.1 [Brassica oleracea] (43)
| |
| /--90-+ /-------------------- Tp1g06580 [Thellungiella parvula] (11)
| | | |
| | | | /----- GSBRNA2T00122208001 [Brassica napus] (21)
| | | | /-100+
| | | /-92-+ | \----- XP_009118406.1 [Brassica rapa] (29)
| | | | | /-95-+
| | | | | | | /----- XP_013603026.1 [Brassica oleracea] (55)
| /-75-+ | | | | \-100+
| | | \-100+ \-100+ \----- GSBRNA2T00019386001 [Brassica napus] (84)
| | | | |
| | | | \--------------- Rsa1.0_00566.1_g00002.1 [Raphanus sativus] (74)
| | | |
\-100+ | \------------------------- 676738286 [Sisymbrium irio] (16)
| |
| \------------------------------------ KFK43106.1 [Arabis alpina] (24)
|
\----------------------------------------- Thhalv10008781m [Eutrema salsugineum] (53)
Root part of tree:
/------------------------------------------------------------------ Carubv10023989m [Capsella rubella] (1)
|
|------------------------------------------------------------------ Cagra.9128s0007.1.p [Capsella grandiflora] (14)
|
| /-------- (172)
| /--100--+
| | \-------- AA32G00863 [Aethionema arabicum] (72)
| /---------------97---------------+
| | \---------------- KFK32292.1 [Arabis alpina] (77)
| |
| | /-------- XP_013634217.1 [Brassica oleracea] (4)
| | /--100--+
| | | \-------- GSBRNA2T00127818001 [Brassica napus] (20)
| | /---76---+
| | | | /-------- GSBRNA2T00036294001 [Brassica napus] (40)
| | | \--100--+
| | | \-------- XP_009140905.1 [Brassica rapa] (98)
| | /---80--+
| | | | /-------- GSBRNA2T00138844001 [Brassica napus] (30)
| | | | /---99--+
| | | | | \-------- XP_009133875.1 [Brassica rapa] (64)
+ /---100--+ | \---100--+
| | | /---84--+ | /-------- GSBRNA2T00047337001 [Brassica napus] (49)
| | | | | \---83--+
| | | | | \-------- XP_013627119.1 [Brassica oleracea] (73)
| | | | |
| | | | | /-------- RrC363_p1 [Raphanus raphanistrum] (71)
| | | | \-----------100----------+
| | | | \-------- Rsa1.0_00076.1_g00020.1 [Raphanus sativus] (130)
| | | |
| | | | /-------- GSBRNA2T00118760001 [Brassica napus] (28)
| | | | /--100--+
| | | | | \-------- XP_009103694.1 [Brassica rapa] (36)
| | | | /---99---+
| | \--100--+ | | /-------- XP_013614548.1 [Brassica oleracea] (59)
| | | | \---99--+
| | |------100------+ \-------- GSBRNA2T00089998001 [Brassica napus] (70)
| | | |
| | | | /-------- Rsa1.0_01063.1_g00007.1 [Raphanus sativus] (44)
| | | \-------100------+
| | | \-------- RrC6925_p1 [Raphanus raphanistrum] (47)
\--100--+ |
| |----------------------------------------- 676725000 [Sisymbrium irio] (69)
| |
| |----------------------------------------- Thhalv10017165m [Eutrema salsugineum] (87)
| |
| \----------------------------------------- Tp4g11330 [Thellungiella parvula] (91)
|
| /-------- Csa16g016650.1 [Camelina sativa] (46)
| /---99--+
| | \-------- Csa05g038110.1 [Camelina sativa] (56)
|--------------------99-------------------+
| \---------------- Csa07g016050.1 [Camelina sativa] (96)
|
| /-------- Araha.12478s0004.1.p [Arabidopsis halleri] (48)
| /--100--+
| | \-------- 481760 [Arabidopsis lyrata] (82)
|--------------------98-------------------+
| \---------------- AT2G28500.1 [Arabidopsis thaliana] (81)
|
\---------------------------------------------------------- Bostr.27991s0074.1.p [Boechera stricta] (92)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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