PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP2006
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Subtree rooted at node 151: /-------------------- OMERI03G06990.1 [Oryza meridionalis] (2) | | /--------------- ORGLA03G0069400.1 [Oryza glaberrima] (24) | | | |--------------- LOC_Os03g10210.1 [Oryza sativa japonica] (29) | | | | /----- ONIVA03G06860.1 [Oryza nivara] (41) /-99-+-100+ /-98-+ | | | | \----- BGIOSGA011276-PA [Oryza sativa indica] (84) | | |-100+ | | | \---------- ORUFI03G07070.1 [Oryza rufipogon] (51) | | | /-100+ | \--------------- OBART03G07110.1 [Oryza barthii] (90) | | | | | \-------------------- OGLUM03G07230.1 [Oryza glumaepatula] (63) /-100-+ | | | \------------------------- KN540295.1_FGP004 [Oryza longistaminata] (99) | | /-88-+ \------------------------------ OPUNC03G06940.1 [Oryza punctata] (42) | | /-100+ \------------------------------------ OB03G17420.1 [Oryza brachyantha] (72) | | | \----------------------------------------- LPERR03G06520.1 [Leersia perrieri] (36) /-69-+ | | /----- PH01000718G0250 [Phyllostachys heterocycla] (77) | \-------------------100------------------+ | \----- PH01000718G0100 [Phyllostachys heterocycla] (100) | | /----- Pavir.9KG637900.1.p [Panicum virgatum] (9) | /-100+ | | \----- Pavir.9NG658500.1.p [Panicum virgatum] (18) | /-100+ | | \---------- Pahal.I00857.1 [Panicum hallii] (53) | /-99-+ | | \--------------- Do011846.1 [Dichanthelium oligosanthes] (69) | /-95-+ | | | /----- Seita.9G503700.1.p [Setaria italica] (23) | | \------100-----+ | /-100+ \----- Sevir.9G508000.1.p [Setaria viridis] (98) | | | | | | /----- Sobic.001G468400.1.p [Sorghum bicolor] (47) | | \---------78--------+ | | \----- GRMZM2G005624_P01 [Zea mays] (71) /-100+ | | | | /----- Zmw_sc00423.1.g00150.1 [Zoysia matrella] (12) | | | /-97-+ | | | | \----- Zjn_sc00003.1.g09190.1.sm.mkhc [Zoysia japonica] (44) | | | /-100+ | | /-100-+ | | /----- Zmw_sc01805.1.g00230.1 [Zoysia matrella] (38) | | | | | \-100+ | | | | | \----- Zpz_sc04267.1.g00020.1.am.mkhc [Zoysia pacifica] (92) | | | | /-100+ | | | | | | /----- Zmw_sc01170.1.g00210.1 [Zoysia matrella] (58) | | | | | | /-92-+ | | | | | | | \----- Zjn_sc00002.1.g11450.1.sm.mkhc [Zoysia japonica] (66) | | | | | \-100+ | | | | | | /----- Zpz_sc01322.1.g00170.1.sm.mkhc [Zoysia pacifica] (80) | | | \---100---+ \-99-+ | | | | \----- Zmw_sc02674.1.g00050.1 [Zoysia matrella] (95) | | | | | | | | /----- Oropetium_20150105_27001A [Oropetium thomaeum] (14) | | | | /-100+ | | | | | \----- Oropetium_20150105_00400A [Oropetium thomaeum] (59) | \------54------+ \----98---+ | | \---------- 462846454 [Eragrostis tef] (16) | | | | /----- Traes_4AS_1EA23DE08.1 [Triticum aestivum] (13) | | /-100+ | | | \----- TRIUR3_07163-P1 [Triticum urartu] (64) | | /-80-+ | | | | /----- Traes_4DL_4798D0BBD.1 [Triticum aestivum] (35) | | | \-99-+ /-78-+ | /-99-+ \----- EMT20928 [Aegilops tauschii] (40) | | | | | | | | /-100+ \--------------- Traes_4BL_BE10705D5.2 [Triticum aestivum] (67) | | | | | | | | | \-------------------- MLOC_8033.1 [Hordeum vulgare] (79) | | \----100---+ | | | /----- Brast02G080500.1.p [Brachypodium stacei] (20) | | \--------100--------+ | | \----- Bradi1g71280.1.p [Brachypodium distachyon] (45) | | | | /----- XP_010943164.1 [Elaeis guineensis] (3) | | /-100+ | | | \----- PDK_30s744271g001 [Phoenix dactylifera] (55) | | /-100+ | | | | /----- PDK_30s1014391g003 [Phoenix dactylifera] (26) | | | \-99-+ | | | \----- XP_010905085.1 [Elaeis guineensis] (27) | | | | | /-88-+ /----- GSMUA_Achr4P07170_001 [Musa acuminata] (10) | | | | /-84-+ | | | | | \----- GSMUA_Achr4P14070_001 [Musa acuminata] (57) --100+ | | | | | | | | |---------- GSMUA_Achr8P31170_001 [Musa acuminata] (19) | | /-77-+ \-94-+ | | | | |---------- GSMUA_Achr1P22640_001 [Musa acuminata] (61) | | | | | | | | | \---------- GSMUA_Achr7P25990_001 [Musa acuminata] (94) | | | | | \--------------78--------------+ \-------------------- Aco003777.1 [Ananas comosus] (52) | | | | /---------- Spipo0G0146700 [Spirodela polyrhiza] (28) | | | | | | /----- PEQU_15186 [Phalaenopsis equestris] (34) | \------83------+-99-+ | | \----- PEQU_05681 [Phalaenopsis equestris] (54) | | | \---------- PEQU_06107 [Phalaenopsis equestris] (73) | | /----- Zosma52g00940.1 [Zostera marina] (21) | /-68-+ | | \----- Zosma20g00010.1 [Zostera marina] (89) \------------------------93------------------------+ \---------- Zosma97g00520.1 [Zostera marina] (39) Root part of tree: /------------------------------------------------------------------ Pavir.2KG510000.1.p [Panicum virgatum] (1) | |------------------------------------------------------------------ Pavir.2NG558700.1.p [Panicum virgatum] (37) | | /------------------------------ (151) | | | | /----- Traes_2DS_20F748657.2 [Triticum aestivum] (8) | | | | | |----- EMT29383 [Aegilops tauschii] (15) | | /-100+ | | | |----- TRIUR3_32949-P1 [Triticum urartu] (25) | | | | | | /----98---+ \----- Traes_2BS_BD0ED621D.2 [Triticum aestivum] (62) | /--78-+ | | | | | | \---------- MLOC_77488.1 [Hordeum vulgare] (65) | | | | | | | /-100+ /----- TRIUR3_10111-P1 [Triticum urartu] (32) | | | | | /---100---+ | | | | | | \----- Traes_2AL_CC3E5591E.1 [Triticum aestivum] (86) | | | | | | | | | | \-100+ /---------- EMT21303 [Aegilops tauschii] (74) | | | | | | | | \-67-+ \-98-+ /----- Traes_2BL_419CEED79.1 [Triticum aestivum] (87) | | | \-100+ | | | \----- Traes_2BL_419CEED791.1 [Triticum aestivum] (97) | | | | | | /----- Brast06G076900.1.p [Brachypodium stacei] (22) | | \--------100--------+ | | \----- Bradi1g23460.1.p [Brachypodium distachyon] (85) | | | | /----- BGIOSGA026014-PA [Oryza sativa indica] (5) | | | | /-89-+ |----- KN538800.1_FGP004 [Oryza longistaminata] (6) | | | | | | | |----- OBART07G20030.1 [Oryza barthii] (30) | | | | | | | |----- ORUFI07G20840.1 [Oryza rufipogon] (68) | | | /-62-+ | | | | |----- LOC_Os07g39320.1 [Oryza sativa japonica] (70) | | | | | | | | | |----- ORGLA07G0257600.1 [Oryza glaberrima] (78) + | | | | | | | /-76-+ |----- OGLUM07G19800.1 [Oryza glumaepatula] (88) | | | | | | | | | | | \----- ONIVA07G18470.1 [Oryza nivara] (96) | | | /-100+ | | | | | | \---------- OMERI07G16720.1 [Oryza meridionalis] (56) | /-100+ | | | | | | | /-100+ \--------------- OPUNC07G18930.1 [Oryza punctata] (93) | | | | | | | | | \----100---+ \-------------------- LPERR07G17340.1 [Leersia perrieri] (91) | | | | | | | \------------------------- OB07G25790.1 [Oryza brachyantha] (75) | | | | | | /------------------------------ 462933074 [Eragrostis tef] (4) | | | | | | | | /---------- Zjn_sc00008.1.g09890.1.am.mk [Zoysia japonica] (7) | | | | | | | | | /-100+ /----- Zmw_sc02633.1.g00060.1 [Zoysia matrella] (82) | | | | | \-99-+ | | | | /-100+ \----- Zmw_sc03232.1.g00050.1 [Zoysia matrella] (110) | | \----94----+ | | | /-100+ | | \--------------- Zpz_sc02328.1.g00030.1.am.mk [Zoysia pacifica] (11) | | | | | | | | | /-95-+ /----- Zmw_sc01857.1.g00180.1 [Zoysia matrella] (17) | | | | | | /-100+ | | | | | | | \----- Zjn_sc00001.1.g05700.1.am.mk [Zoysia japonica] (60) | | | | | \---100---+ | | | \-94-+ | /----- Zpz_sc01465.1.g00080.1.am.mk [Zoysia pacifica] (33) | | | | \-100+ | | | | \----- Zmw_sc00107.1.g00160.1 [Zoysia matrella] (46) | /-100+ | | | | | | \------------------------- Oropetium_20150105_16654A [Oropetium thomaeum] (49) | | | | | | | | /----- GRMZM2G104204_P01 [Zea mays] (76) | | | | | | | | \-------------------100------------------+----- Sobic.002G353800.1.p [Sorghum bicolor] (81) | /-93-+ | | | | | | \----- GRMZM2G062244_P01 [Zea mays] (83) | | | | | | | \--------------------------------------------------- Do011892.1 [Dichanthelium oligosanthes] (50) | | | \-100+ | /----- Sevir.2G379700.1.p [Setaria viridis] (31) | \------------------------100-----------------------+ | \----- Seita.2G368600.1.p [Setaria italica] (48) | \------------------------------------------------------------- Pahal.B04484.1 [Panicum hallii] (43) |