PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3576
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Subtree rooted at node 109: /----- XP_013618814.1 [Brassica oleracea] (2) /-100+ | \----- GSBRNA2T00086514001 [Brassica napus] (16) /-100+ | \---------- GSBRNA2T00076031001 [Brassica napus] (3) /-100-+ | | /----- Rsa1.0_01819.1_g00004.1 [Raphanus sativus] (25) | \---100---+ /-100+ \----- RrC29_p9 [Raphanus raphanistrum] (62) | | | | /----- Rsa1.0_00056.1_g00030.1 [Raphanus sativus] (26) | \------100------+ | \----- RrC1679_p1 [Raphanus raphanistrum] (43) | /-88-+ /----- GSBRNA2T00025021001 [Brassica napus] (5) | | /-100+ | | | \----- XP_013595689.1 [Brassica oleracea] (9) | | /-100+ | | | | /----- GSBRNA2T00113586001 [Brassica napus] (19) | | | \-99-+ | \----100---+ \----- XP_009136422.1 [Brassica rapa] (49) | | /-85-+ | /----- RrC61_p7 [Raphanus raphanistrum] (17) | | \---100---+ | | \----- Rsa1.0_00576.1_g00012.1 [Raphanus sativus] (22) | | | |------------------------------- Thhalv10004440m [Eutrema salsugineum] (6) | | | |------------------------------- Tp2g24280 [Thellungiella parvula] (21) | | | \------------------------------- 676729414 [Sisymbrium irio] (35) | /-------63------+ /----- Carubv10026656m [Capsella rubella] (4) | | /----84---+ | | | \----- Cagra.0083s0006.1.p [Capsella grandiflora] (53) | | | | | /--64-+ /----- Csa02g067920.1 [Camelina sativa] (8) | | | | /-50-+ | | | | | \----- Csa11g094820.1 [Camelina sativa] (50) | | | \-100+ | | | \---------- Csa18g034350.1 [Camelina sativa] (36) | | | | \------63------+ /----- Araha.15705s0010.1.p [Arabidopsis halleri] (20) | | /-83-+ | | | \----- 496250 [Arabidopsis lyrata] (47) | |----82----+ | | \---------- AT5G60970.1 [Arabidopsis thaliana] (29) | | | \--------------------- Bostr.26833s0140.1.p [Boechera stricta] (34) | | /----- Carubv10001730m [Capsella rubella] (7) | /------100------+ | | \----- Cagra.1365s0013.1.p [Capsella grandiflora] (11) | | | | /----- Csa08g056300.1 [Camelina sativa] (13) | /-100+ /-62-+ | | | | \----- Csa20g011470.1 [Camelina sativa] (60) | | | /-100+ | | | | \---------- Csa13g010080.1 [Camelina sativa] (32) | | \--86-+ | /---100---+ \--------------- Bostr.13129s0160.1.p [Boechera stricta] (39) | | | /-100+ | | /----- 487639 [Arabidopsis lyrata] (48) | | | | /-100+ | | | | | \----- Araha.31158s0001.1.p [Arabidopsis halleri] (51) | | | \------100------+ | | | \---------- AT5G08070.1 [Arabidopsis thaliana] (59) | | | | | | /----- XP_009131031.1 [Brassica rapa] (12) | | | /-100+ | | | | \----- GSBRNA2T00129677001 [Brassica napus] (46) | | /-100+ /-100+ | | | | | | /----- GSBRNA2T00134526001 [Brassica napus] (45) | | | | | \-100+ | | | | /-100-+ \----- XP_013626503.1 [Brassica oleracea] (57) | | | | | | | | | | | | /----- RrC141_p2 [Raphanus raphanistrum] (23) | | | | /-86-+ \---100---+ | | | | | | \----- Rsa1.0_74785.1_g00001.1 [Raphanus sativus] (54) | | /-100+ | | | /-78-+ | | | | /-100+ \--------------------- 676744398 [Sisymbrium irio] (40) | | | | | | | | | | | | | \-97-+ \-------------------------- Tp6g34880 [Thellungiella parvula] (52) | | | | | | | | |--65-+ | \------------------------------- Thhalv10014467m [Eutrema salsugineum] (42) | | | | | | | | | \----------------------------------------- AA44G00073 [Aethionema arabicum] (14) | | | | | | | \---------------------------------------------- AA5G00182 [Aethionema arabicum] (38) | | | | | | /----- XP_010546434.1 [Tarenaya hassleriana] (28) --100+ | \----------------------100---------------------+ | | \----- XP_010522549.1 [Tarenaya hassleriana] (37) | | | | /----- Gorai.001G076700.1 [Gossypium raimondii] (15) | | /-50-+ | | | \----- Gh_D07G0680 [Gossypium hirsutum] (18) | \----------------------100---------------------+ | | /----- Gh_A07G0613 [Gossypium hirsutum] (27) | \-81-+ | \----- Cotton_A_19125_BGI-A2_v1.0 [Gossypium arboreum] (44) | \-------------------------------------------------------------- evm.model.supercontig_94.62 [Carica papaya] (24) Root part of tree: /------------------------------------------------------------------- Eucgr.B00608.1.p [Eucalyptus grandis] (1) | |------------------------------------------------------------------- EcS540317.10 [Eucalyptus camaldulensis] (61) | | /---------------------- (109) | | | /---------------100---------------+ /----------- Ciclev10020626m [Citrus clementina] (30) + | \----100---+ | | \----------- orange1.1g017725m [Citrus sinensis] (58) | | | | /----------- Gh_D12G1814 [Gossypium hirsutum] (10) | | /----100---+ | | | \----------- Gorai.008G199700.1 [Gossypium raimondii] (63) \----100---+ | | /----100---+---------------------- Cotton_A_31971_BGI-A2_v1.0 [Gossypium arboreum] (33) | | | | /----100----+ \---------------------- Gh_A12G1657 [Gossypium hirsutum] (41) | | | | | \--------------------------------- Thecc1EG014288t1 [Theobroma cacao] (31) \----100---+ | /----------- Neem_7125_f_1 [Azadirachta indica] (55) \---------------100---------------+ \----------- Neem_31015_f_1 [Azadirachta indica] (56) |