PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGMP4011
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 116: /----- Oropetium_20150105_11618A [Oropetium thomaeum] (2) /------100------+ | \----- Oropetium_20150105_27917A [Oropetium thomaeum] (43) | | /---------- Zjn_sc00029.1.g01940.1.am.mk [Zoysia japonica] (10) /-78-+ | | | /-100+ /----- Zmw_sc06294.1.g00020.1 [Zoysia matrella] (32) | | | \-100+ | \-100-+ \----- Zpz_sc00526.1.g00040.1.am.mk [Zoysia pacifica] (37) | | /------100-----+ \--------------- Zmw_sc05434.1.g00020.1 [Zoysia matrella] (68) | | | | /----- Zjn_sc00147.1.g00060.1.am.mk [Zoysia japonica] (40) | | /-93-+ | | | \----- Zmw_sc02847.1.g00070.1 [Zoysia matrella] (62) | \------100------+ | | /----- Zpz_sc00906.1.g00080.1.sm.mk [Zoysia pacifica] (47) | \-97-+ | \----- Zmw_sc01411.1.g00190.1 [Zoysia matrella] (66) | | /----- GRMZM2G122615_P01 [Zea mays] (8) | | | /------------98-----------+----- Sobic.003G254900.1.p [Sorghum bicolor] (45) /-97-+ | | | | | \----- GRMZM2G163843_P01 [Zea mays] (49) | | | | | | /----- Pavir.5NG411900.1.p [Panicum virgatum] (22) | | | /-50-+ | | | | \----- Pavir.5NG465400.1.p [Panicum virgatum] (65) | | /-96-+ /-100+ | | | | | \---------- Pavir.5NG430300.1.p [Panicum virgatum] (44) | | | | /-100-+ | | | | | \--------------- Pavir.5KG432400.1.p [Panicum virgatum] (31) | | | | /-100+ /--97-+ | | | | \--------------------- Pahal.G00928.1 [Panicum hallii] (35) | | \-98-+ \-50-+ | | | | /----- Seita.5G268800.1.p [Setaria italica] (34) | | | \---------100--------+ | | | \----- Sevir.5G271900.1.p [Setaria viridis] (59) | | | | | \------------------------------------ Do011477.1 [Dichanthelium oligosanthes] (39) | | | | /----- Oropetium_20150105_22455A [Oropetium thomaeum] (7) | | /-95-+ | | | \----- Oropetium_20150105_22454A [Oropetium thomaeum] (25) | \----------------100----------------+ | \---------- Oropetium_20150105_22457A [Oropetium thomaeum] (9) | | /----- EMT14221 [Aegilops tauschii] (4) | /-100+ | | \----- MLOC_74840.1 [Hordeum vulgare] (41) | /-100+ | | \---------- TRAES3BF073600060CFD_t1 [Triticum aestivum] (6) | /--97-+ | | | /----- Brast01G185400.1.p [Brachypodium stacei] (15) | | \---100---+ | /-87-+ \----- Bradi2g46427.1.p [Brachypodium distachyon] (46) | | | | | \--------------------- PH01001669G0130 [Phyllostachys heterocycla] (29) /-55-+ | | | | /----- OGLUM01G30190.1 [Oryza glumaepatula] (12) | | | | | | | |----- ONIVA01G29690.1 [Oryza nivara] (14) | | | | | | | |----- OMERI01G24020.1 [Oryza meridionalis] (17) | | | | | |------------87-----------+ /-100+----- ORGLA01G0215600.1 [Oryza glaberrima] (36) | | | | | | | | | |----- LOC_Os01g48446.1 [Oryza sativa japonica] (57) | | | | | | | | /-100+ |----- BGIOSGA001029-PA [Oryza sativa indica] (69) | | | | | | | | | | | \----- ORUFI01G29330.1 [Oryza rufipogon] (70) | | | /--96-+ | | | | | | \---------- OPUNC01G26280.1 [Oryza punctata] (51) /-88-+ | | | | | | | \-100+ \--------------- LPERR01G22560.1 [Leersia perrieri] (61) | | | | | | | \--------------------- OB01G35490.1 [Oryza brachyantha] (71) | | | | | | /----- EMT03210 [Aegilops tauschii] (13) | | | /-70-+ | | | | \----- EMT10902 [Aegilops tauschii] (18) | | \--------------------59-------------------+ | | \---------- Brast02G031500.1.p [Brachypodium stacei] (24) | | | | /---------- TRAES3BF073600100CFD_t1 [Triticum aestivum] (5) | | | | | /-97-+ /----- Brast01G184700.1.p [Brachypodium stacei] (23) | | | \-100+ | \--------------------87-------------------+ \----- Bradi2g46483.1.p [Brachypodium distachyon] (42) | | --57-+ \--------------- OPUNC01G26350.1 [Oryza punctata] (64) | | /----- LOC_Os01g47670.1 [Oryza sativa japonica] (3) | /-100+ | | \----- ORGLA01G0211000.1 [Oryza glaberrima] (60) | | | |---------- ORUFI01G28690.1 [Oryza rufipogon] (11) | | | |---------- OGLUM01G29620.1 [Oryza glumaepatula] (20) | /-99-+ | | |---------- OBART01G25780.1 [Oryza barthii] (27) | | | | | |---------- ONIVA01G29020.1 [Oryza nivara] (38) | /--99-+ | | | | \---------- BGIOSGA001061-PA [Oryza sativa indica] (52) | | | | | | /----- OPUNC01G25690.1 [Oryza punctata] (26) \-------------------100------------------+ \----61---+ | \----- OMERI01G23440.1 [Oryza meridionalis] (63) | \--------------------- LPERR01G22040.1 [Leersia perrieri] (48) Root part of tree: /------------------------------------------------------------------- Sobic.003G255000.1.p [Sorghum bicolor] (1) | |------------------------------------------------------------------- GRMZM2G163841_P01 [Zea mays] (56) | | /--------------------------------- (116) | | | | /----------- Brast01G190200.1.p [Brachypodium stacei] (50) | /-----86----+ /----100---+ | | | | \----------- Bradi2g46020.1.p [Brachypodium distachyon] (72) | | \----100---+ + | | /----------- TRAES3BF063400070CFD_t1 [Triticum aestivum] (55) | | \----100---+ | /----100---+ \----------- TRIUR3_22118-P1 [Triticum urartu] (58) | | | | | |--------------------------------------------- PH01002164G0250 [Phyllostachys heterocycla] (30) | | | | | \--------------------------------------------- Brast02G383700.1.p [Brachypodium stacei] (53) | | | | /--------------------------------- Pahal.G00929.1 [Panicum hallii] (16) \----100---+ | | /----100----+ /---------------------- Pavir.5KG432300.1.p [Panicum virgatum] (21) | | | | | | \----100---+ /----------- Pavir.5NG412100.1.p [Panicum virgatum] (33) | | \----100---+ | | \----------- Pavir.5NG430400.1.p [Panicum virgatum] (67) \----78----+ | /----------- Sevir.5G272000.1.p [Setaria viridis] (19) |---------------100---------------+ | \----------- Seita.5G268900.1.p [Setaria italica] (54) | \--------------------------------------------- Do029755.1 [Dichanthelium oligosanthes] (28) |