PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02847.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 417aa MW: 44988.2 Da PI: 9.2381

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02847.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	69.7	7.7e-22	85	218	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknra.. 77 f+ hP+d elv+ yL++ v++ + i+evd+y++ P +L + ++ +e wyf s+ + k+++g+rk r+ Zmw_sc02847.1.g00070.1.am.mk 85 FHSHPSDLELVKSYLRPWVDSGLKAGGGAfIHEVDVYSAAPASLTRefapaVAQDGECAWYFLSPLRAKSKRGRRKARTvg 165 6679*************99886555555**********844677444445559***************634 PP NAM 78 tksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 t +g W++ k k+v++ +++ vg ++++ f ++ + ++t W+m e rl Zmw_sc02847.1.g00070.1.am.mk 166 TGEGCWHSEAKFKPVVDGldDRRRVGFRQSFSFMIKDGAQRTRTGWLMLELRL 218 7799********98888899******99999999****99887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	30.975	81	240	IPR003441	NAC domain
SuperFamily	SSF101941	8.63E-30	85	240	IPR003441	NAC domain
Pfam	PF02365	5.8E-13	85	218	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence Send to blast
MTEPDGRVIL ARQTPSRACR ARVGDPADSD SKSNRFSSCR FRAVVIGPAA SKIATASPPP 60 SLPSMVRSPS TPPPNQKPAS PCAPFHSHPS DLELVKSYLR PWVDSGLKAG GGAFIHEVDV 120 YSAAPASLTR EFAPAVAQDG ECAWYFLSPL RAKSKRGRRK ARTVGTGEGC WHSEAKFKPV 180 VDGLDDRRRV GFRQSFSFMI KDGAQRTRTG WLMLELRLAA EGDDEEASAG NIVLCKVYRS 240 PRHPGEDLPP AARKRTADDD KSNASPRSVG KADEDEGSNV TAGRRKSDGQ GYSAANVAVP 300 RNTDDEVRET NAAALAPGRK ENEAEDDNES AEISANTPGR KRKAADGKTS IATSPAQPAR 360 SKRKTDRELH CPQCGYHLDA EAVLAAAKTI SETKSETGIV QIKGDSLVKD HTFHQFF

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence Send to blast

MTEPDGRVIL ARQTPSRACR ARVGDPADSD SKSNRFSSCR FRAVVIGPAA SKIATASPPP  60
SLPSMVRSPS TPPPNQKPAS PCAPFHSHPS DLELVKSYLR PWVDSGLKAG GGAFIHEVDV  120
YSAAPASLTR EFAPAVAQDG ECAWYFLSPL RAKSKRGRRK ARTVGTGEGC WHSEAKFKPV  180
VDGLDDRRRV GFRQSFSFMI KDGAQRTRTG WLMLELRLAA EGDDEEASAG NIVLCKVYRS  240
PRHPGEDLPP AARKRTADDD KSNASPRSVG KADEDEGSNV TAGRRKSDGQ GYSAANVAVP  300
RNTDDEVRET NAAALAPGRK ENEAEDDNES AEISANTPGR KRKAADGKTS IATSPAQPAR  360
SKRKTDRELH CPQCGYHLDA EAVLAAAKTI SETKSETGIV QIKGDSLVKD HTFHQFF

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004969524.2	2e-92	protein ATAF2
TrEMBL	A0A368R932	6e-91	A0A368R932_SETIT; Uncharacterized protein
TrEMBL	K3XIX7	2e-91	K3XIX7_SETIT; Uncharacterized protein
STRING	Si001850m	3e-92	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4011	29	72