PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc06294.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 475aa MW: 52007.5 Da PI: 10.2091

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc06294.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	70.6	4.1e-22	161	292	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr..at 78 f+ +P+d el+ yL++ ve+ +i+++d+y eP +L + + + +e+ wyf ++ ++k++ gkrk+r at Zmw_sc06294.1.g00020.1.am.mk 161 FHTQPSDLELLRSYLRPWVESGLKAG-AFIHDADVYADEPARLTEtfapaASQDGERAWYFLTPLHRKSEGGKRKSRtvAT 240 5668*************9988555.78**********74467755566888****************7668 PP NAM 79 ksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g W++ k+k+v++ ++++vg ++++ f k++ + +t W+m e rl Zmw_sc06294.1.g00020.1.am.mk 241 GEGWWHNEAKSKPVVDGldGRRHVGYRQSFSFMKKEGSLRIRTGWLMLELRL 292 89*********98888899******9999999*****99887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	32.2	157	311	IPR003441	NAC domain
Pfam	PF02365	1.2E-12	161	292	IPR003441	NAC domain
SuperFamily	SSF101941	5.89E-29	161	311	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence Send to blast
MLRVWYGGCA DGEIERFIRL KLPASTTVPP IHSPIGPGYT RTSAALPLDK RPAAFPQKPE 60 RRTNLARPLG ASPFNSNRPS PAAQDSVARR NPTRIGSPRV TVSVTPRRRV RFGIGSFLRL 120 FGYARPPPPL GRPLSVSVYM VRSPTTPPPT PNGKPAPNAP FHTQPSDLEL LRSYLRPWVE 180 SGLKAGAFIH DADVYADEPA RLTETFAPAA SQDGERAWYF LTPLHRKSEG GKRKSRTVAT 240 GEGWWHNEAK SKPVVDGLDG RRHVGYRQSF SFMKKEGSLR IRTGWLMLEL RLGDAADPRE 300 GGLVLCKVYR SPRHPGTITC PAARDQLPRP ERKTNDDERS DAAAGRSQFD GEGSNAATPR 360 ITYEAIPDTA AAAARGRKEK AADDNDDSDE TWLNSPDSKR KAANDETSVA ASAAEHAQSK 420 RKTEGGLHYC PQCGFHLDAV MAAVNAKSSE TKSEVGIVQV QGDSLVKDHS FHQFI

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence Send to blast

MLRVWYGGCA DGEIERFIRL KLPASTTVPP IHSPIGPGYT RTSAALPLDK RPAAFPQKPE  60
RRTNLARPLG ASPFNSNRPS PAAQDSVARR NPTRIGSPRV TVSVTPRRRV RFGIGSFLRL  120
FGYARPPPPL GRPLSVSVYM VRSPTTPPPT PNGKPAPNAP FHTQPSDLEL LRSYLRPWVE  180
SGLKAGAFIH DADVYADEPA RLTETFAPAA SQDGERAWYF LTPLHRKSEG GKRKSRTVAT  240
GEGWWHNEAK SKPVVDGLDG RRHVGYRQSF SFMKKEGSLR IRTGWLMLEL RLGDAADPRE  300
GGLVLCKVYR SPRHPGTITC PAARDQLPRP ERKTNDDERS DAAAGRSQFD GEGSNAATPR  360
ITYEAIPDTA AAAARGRKEK AADDNDDSDE TWLNSPDSKR KAANDETSVA ASAAEHAQSK  420
RKTEGGLHYC PQCGFHLDAV MAAVNAKSSE TKSEVGIVQV QGDSLVKDHS FHQFI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004969524.2	3e-79	protein ATAF2
TrEMBL	A0A368R932	6e-78	A0A368R932_SETIT; Uncharacterized protein
TrEMBL	K3XIX7	3e-78	K3XIX7_SETIT; Uncharacterized protein
STRING	Si001850m	5e-79	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4011	29	72