PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast02G031500.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | NAC | ||||||||
Protein Properties | Length: 228aa MW: 25374.7 Da PI: 8.48 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.9 | 7e-18 | 47 | 173 | 12 | 127 |
NAM 12 eelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk 95 lv +yL ++v+++++ ++i+e+d+y+++P L + +++++ ++wyfFs+ + ++krk+ + ++g W++ ++v++ Brast02G031500.1.p 47 TKLVRDYLIPRVSSDEVVPVTFIHECDVYTADPAVLTNrykscfSIDGRPESWYFFSPLPLMNGKKKRKRSvQNSEGWWQSDHAPHKVVVC 137 679*************666699**************863556544445777***********99999999856669****99999999887 PP NAM 96 ...kgelvglkktLvfykgrapkge.ktdWvmheyr 127 k+ ++g ++ L+f +++a+ g ++ W+mhe + Brast02G031500.1.p 138 ggeKEVVIGYRQRLAFSTKDARGGIdRSGWLMHELS 173 5555556**********9888877549*******76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 22.765 | 36 | 189 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.8E-11 | 45 | 172 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.96E-21 | 47 | 188 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence Send to blast |
MAAVVTSPVS CPRSEEHSPA SFPKPSLLHD AGADLPVDTT SSAPWVTKLV RDYLIPRVSS 60 DEVVPVTFIH ECDVYTADPA VLTNRYKSCF SIDGRPESWY FFSPLPLMNG KKKRKRSVQN 120 SEGWWQSDHA PHKVVVCGGE KEVVIGYRQR LAFSTKDARG GIDRSGWLMH ELSADRDDAA 180 VALCWVYRRP RRKGDAPARE GERDERLKLP QMGNLGGLHL GQGQQQF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 111 | 116 | KKRKRS |
2 | 188 | 192 | RPRRK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast02G031500.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4011 | 29 | 72 |
Link Out ? help Back to Top | |
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Phytozome | Brast02G031500.1.p |