PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc05434.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 426aa MW: 47084.9 Da PI: 9.121

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc05434.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	70.9	3.3e-22	112	243	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr..at 78 f+ +P+d el+ yL++ ve+ +i+++d+y eP +L + + + +e+ wyf ++ ++k++ gkrk+r at Zmw_sc05434.1.g00020.1.am.mk 112 FHTQPSDLELLRSYLRPWVESGLKAG-AFIHDADVYADEPARLTEtfapaASQDGERAWYFLTPLHRKSEGGKRKSRtvAT 191 5668*************9988555.78**********74467755566888****************7668 PP NAM 79 ksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g W++ k+k+v++ ++++vg ++++ f k++ + +t W+m e rl Zmw_sc05434.1.g00020.1.am.mk 192 GEGWWHNEAKSKPVVDGldGRRHVGYRQSFSFMKKEGSLRIRTGWLMLELRL 243 89*********98888899******9999999*****99887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	32.362	108	262	IPR003441	NAC domain
SuperFamily	SSF101941	2.35E-29	112	262	IPR003441	NAC domain
Pfam	PF02365	9.4E-13	112	243	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence Send to blast
MLRVRYGGCA DGEIERFTLS TPTVHRPQRK SRWPGGIRLV SDLLALPCPL RLGDELDSES 60 EVRNRPRFLR LFGYARPPPP LGRPLSVSVY MVRSPTTPPP TPNGKLAPNA PFHTQPSDLE 120 LLRSYLRPWV ESGLKAGAFI HDADVYADEP ARLTETFAPA ASQDGERAWY FLTPLHRKSE 180 GGKRKSRTVA TGEGWWHNEA KSKPVVDGLD GRRHVGYRQS FSFMKKEGSL RIRTGWLMLE 240 LRLGDAEDPR EGGLVLCKVY RSPRHPGTIT CPAARDQLPR PERKTNDDER SDAAAGRRKF 300 DGEGSSAATP RITYEAIPDT AAAAARGRKE KAADDNDDSD ETWLNSPDSK RKAANDETSV 360 AASAAEHAQS KRKTEGGLHY CPQCGFHLDA VMAAVNAKSS ETKSEVGIVQ VQGDSLVKDH 420 SFHQFI

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence Send to blast

MLRVRYGGCA DGEIERFTLS TPTVHRPQRK SRWPGGIRLV SDLLALPCPL RLGDELDSES  60
EVRNRPRFLR LFGYARPPPP LGRPLSVSVY MVRSPTTPPP TPNGKLAPNA PFHTQPSDLE  120
LLRSYLRPWV ESGLKAGAFI HDADVYADEP ARLTETFAPA ASQDGERAWY FLTPLHRKSE  180
GGKRKSRTVA TGEGWWHNEA KSKPVVDGLD GRRHVGYRQS FSFMKKEGSL RIRTGWLMLE  240
LRLGDAEDPR EGGLVLCKVY RSPRHPGTIT CPAARDQLPR PERKTNDDER SDAAAGRRKF  300
DGEGSSAATP RITYEAIPDT AAAAARGRKE KAADDNDDSD ETWLNSPDSK RKAANDETSV  360
AASAAEHAQS KRKTEGGLHY CPQCGFHLDA VMAAVNAKSS ETKSEVGIVQ VQGDSLVKDH  420
SFHQFI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004969524.2	1e-79	protein ATAF2
TrEMBL	A0A368R932	3e-78	A0A368R932_SETIT; Uncharacterized protein
TrEMBL	A0A3L6SNQ3	1e-78	A0A3L6SNQ3_PANMI; Protein ATAF2-like
TrEMBL	K3XIX7	2e-78	K3XIX7_SETIT; Uncharacterized protein
STRING	Si001850m	3e-79	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4011	29	72