PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00906.1.g00080.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 353aa    MW: 38171.3 Da    PI: 7.5609
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00906.1.g00080.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.25.4e-22211545128
                           NAM   5 frFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknra.. 77 
                                   f+ hP+d elv+ yL++ v++       + i+evd+y++ P +L +      ++ +e  wyf s+ + k+++g+rk r+  
  Zpz_sc00906.1.g00080.1.sm.mk  21 FHSHPSDLELVKSYLRPWVDSGLKAGGGAfIHEVDVYSAAPASLTRefapaVAQDGECAWYFLSPLRAKSKRGRRKARTvg 101
                                   6679***************99886555555**************844677444445559*******************634 PP

                           NAM  78 tksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   t +g W++  k k+v++   +++ vg ++++ f  ++  + ++t W+m e rl
  Zpz_sc00906.1.g00080.1.sm.mk 102 TGEGCWHSEAKFKPVVDGldDRRRVGFRQSFSFMIKDGAQRTRTGWLMLELRL 154
                                   7799************98888899**********99999999******99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100530.97517176IPR003441NAC domain
SuperFamilySSF1019416.41E-3021176IPR003441NAC domain
PfamPF023654.1E-1321154IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MVRSPSKPPP NEKPASPCAP FHSHPSDLEL VKSYLRPWVD SGLKAGGGAF IHEVDVYSAA  60
PASLTREFAP AVAQDGECAW YFLSPLRAKS KRGRRKARTV GTGEGCWHSE AKFKPVVDGL  120
DDRRRVGFRQ SFSFMIKDGA QRTRTGWLML ELRLAAEGDD EEASAGNIVL CKVYRSPRHP  180
GEDLPPAARK RTADDDKSNA SPRSVGKADE DEGSNVTAGR RKSDGQGYSA ANVAVPRNTD  240
DEVRETNAAA LAPGSKENEA EDDNESAEIS ANTPGSKRKA ADGESSIATS PAQPARSKRK  300
TDRELHCPQC GYHLDAEAVL AAAKTISETK SETGIVQIKG DSLVKDHTFH QFF
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00906.1.g00080.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004969524.24e-92protein ATAF2
TrEMBLA0A368R9328e-91A0A368R932_SETIT; Uncharacterized protein
TrEMBLK3XIX73e-91K3XIX7_SETIT; Uncharacterized protein
STRINGSi001850m5e-92(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40112972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.11e-12NAC domain containing protein 42