PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRAES3BF073600060CFD_t1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 570aa    MW: 61225.1 Da    PI: 9.2862
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRAES3BF073600060CFD_t1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM713.2e-22141436126
                      NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratk...sgyW 83 
                                hP+d el++ yL + v++ + +  ++i+e+d+y + P+dL +     +++ ++++wyfF++ + k+++g+rk+r++    +g W
  TRAES3BF073600060CFD_t1  14 ASHPSDLELISTYLIPWVSTGERPW-KFIHEADVYAATPQDLTRayapaTASDGQESWYFFTTLRAKSRRGQRKSRTVGsgdHGCW 98 
                              569*******************999.89**************84466655555788********************876455789* PP

                      NAM  84 katgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmhey 126
                              ++    k++++   +++++g ++ + f ++++ + +++ W+m e 
  TRAES3BF073600060CFD_t1  99 HSERAAKPLFAGigHSRQIGYRQAFSFATKEDGRLVRSGWLMAEI 143
                              **********99889999***********9999*********997 PP
2NAM652.3e-202734016126
                      NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknra..tksgyWk 84 
                                hP+d+ l++ yL+++v++ ++++ ++ +++d+y++ P  L +     +++ +ek wyfF+    k+a+g+r+ r+  t +g W+
  TRAES3BF073600060CFD_t1 273 ASHPSDQVLIKSYLTPRVASGQHPC-QFTHDADVYTASPGALTRkyppaMASDGEKAWYFFTLLPAKSAHGQRRPRTvgTGEGCWH 357
                              569*******************999.89**************74467755566888********************6347799*** PP

                      NAM  85 atgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmhey 126
                              +    k+vl+ +g+ +g ++ + f    +g++ ++ ++ W+m e 
  TRAES3BF073600060CFD_t1 358 SEAGVKPVLD-GGHPIGWRQFFSFMtkeEGQRVRSIRSGWIMVEI 401
                              **********.**************77668888899******996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100531.2819163IPR003441NAC domain
PfamPF023655.4E-1211142IPR003441NAC domain
SuperFamilySSF1019411.18E-3012163IPR003441NAC domain
PROSITE profilePS5100529.625268423IPR003441NAC domain
PfamPF023653.0E-11270400IPR003441NAC domain
SuperFamilySSF1019412.62E-31271423IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    Send to blast
MAPIRRAAQR PDFASHPSDL ELISTYLIPW VSTGERPWKF IHEADVYAAT PQDLTRAYAP  60
ATASDGQESW YFFTTLRAKS RRGQRKSRTV GSGDHGCWHS ERAAKPLFAG IGHSRQIGYR  120
QAFSFATKED GRLVRSGWLM AEIGLNPDAS AEEELVLCKV YRSPRVGTGQ RSTAPAATGV  180
GPVRIGRGKA SEEDSSSSEE GTPRAAGPGC YSAQQPARVS ASTSGTLSME ESDSEQGSTS  240
QGGDGGVPRS EALRAAHLPR IPTVPAAQRP DFASHPSDQV LIKSYLTPRV ASGQHPCQFT  300
HDADVYTASP GALTRKYPPA MASDGEKAWY FFTLLPAKSA HGQRRPRTVG TGEGCWHSEA  360
GVKPVLDGGH PIGWRQFFSF MTKEEGQRVR SIRSGWIMVE IGLDHGQQEG PSDELVLCKV  420
YRSPRAGPVE PPAAAGRKRK SGDNYSASAA PVLTLGPAPG ARNSTAASTS SSGHKKRKTH  480
SRNSGHVMRP ARGVLKLTRP ATSGRKKSTS AACTRCGMEP AESHRGTPEE EDGSETDLDE  540
DDPMTGDSGA PHCLKPGESS GCTRPFYQFK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1475479KRKTH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020160039.10.0uncharacterized protein LOC109745335
TrEMBLA0A3B6FT870.0A0A3B6FT87_WHEAT; Uncharacterized protein
STRINGBRADI2G46430.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40112972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.15e-15NAC domain containing protein 2
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]