PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do011477.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 728aa    MW: 78276.1 Da    PI: 10.3866
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do011477.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM82.58.8e-26161475128
         NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlsk. 95 
                 f+ hPtd elv+ yL++ ve+  +    +i+e+d+y ++P dL +      ++ +e+ wyfF++ ++k+ +gkrk r  at  g W++  k+k+v++  
  Do011477.1  16 FQSHPTDLELVNSYLRPWVETGLMAG-AFIHEADVYAADPADLTRrfapaVAQDGERAWYFFTPLRHKSVRGKRKARtvATGGGCWHNEAKSKPVYTGi 113
                 7779*****************99888.88**************84467755566888********************7668899************988 PP

         NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +++++g ++++ f k++    ++t W+m e rl
  Do011477.1 114 nGRRQIGHRQSFSFVKKDGGARVRTGWLMMELRL 147
                 88999***********999999********9886 PP
2NAM55.12.5e-174095348128
         NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk..kge 98 
                 hP+d el+  yL+++v + + +   +i+e+d+y + P +L +     k +++++ wyfF+  + + + ++  n  +   g W +  + k+vls   +++
  Do011477.1 409 HPSDAELIRSYLRPRVVSGTGTKVGFINETDLYAAGPDHLTTnfqplK-AGGQEAWYFFTMLRFRGSLKDSVNCaVDGGGAWIHRISPKPVLSDdgNDQ 506
                 9**************88888555599**************84355422.346779******99998888888883556899************977777 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  + +++t++f  +++   + ++W+m e rl
  Do011477.1 507 RIATRRTFTFVGKEDT--KGSEWLMTELRL 534
                 8**********55555..569******987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100533.74812176IPR003441NAC domain
SuperFamilySSF1019411.96E-3214176IPR003441NAC domain
PfamPF023654.4E-1515147IPR003441NAC domain
PROSITE profilePS5100524.422402560IPR003441NAC domain
SuperFamilySSF1019411.83E-21403559IPR003441NAC domain
PfamPF023651.3E-9409534IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 728 aa     Download sequence    Send to blast
MVRSPSAASK PPCAAFQSHP TDLELVNSYL RPWVETGLMA GAFIHEADVY AADPADLTRR  60
FAPAVAQDGE RAWYFFTPLR HKSVRGKRKA RTVATGGGCW HNEAKSKPVY TGINGRRQIG  120
HRQSFSFVKK DGGARVRTGW LMMELRLLKD GGAGQEAAQA EGAALGNLVL CKVYRSPRNP  180
EQPSDRERAA LKSEAADGDG ESSAATAEEE DDSSDAPPLA PAAAASGSQK KSDGEESSEA  240
TVAAPSRHSK SDDEISGAAA AAPGRKEKAA GDEDSAETSA AAPARKRKAP EDESSGAAAA  300
AAAPAPKRKA DGSSSPGAPA PSTTEMQCPH CGTHLVVTLK VLETKTKSET EIAKDESAPG  360
ASDAARAARY INRRRSSPPD HSGFRNNSVH AMAASPPKPP PAPFVLASHP SDAELIRSYL  420
RPRVVSGTGT KVGFINETDL YAAGPDHLTT NFQPLKAGGQ EAWYFFTMLR FRGSLKDSVN  480
CAVDGGGAWI HRISPKPVLS DDGNDQRIAT RRTFTFVGKE DTKGSEWLMT ELRLGPEYDH  540
QGRPIGGSSH PLVLCKVYRN PREPKADDGS PVARGXXXXX XXXXXXXXXX XXXGVAAPGR  600
KEEVDEDIDA ETAAAVAAGP RLRGRRTTST LVRRQRHRLD PRRRPSVRAL VRPRLGNSAM  660
TGGPLLMLRR KPRPQQQRRS PKISPNARST SSLTLAFRHP QERKSRSPAN PGRAVAFEIR  720
RSPRNGEP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-121618219174Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo011477.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004969524.20.0protein ATAF2
TrEMBLA0A368R9320.0A0A368R932_SETIT; Uncharacterized protein
TrEMBLK3XIX70.0K3XIX7_SETIT; Uncharacterized protein
STRINGSi001850m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40112972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.16e-19NAC family protein